RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 DDX23Q9BUQ8 820 aaKnown RBP12.21□□□□□ -0.45
SNRNP200-207ENST00000493271 PHF20Q9BVI0 1012 aa12.21□□□□□ -0.45
SNRNP200-207ENST00000493271 RNF39Q9H2S5 420 aa12.21□□□□□ -0.45
SNRNP200-207ENST00000493271 XPNPEP1Q9NQW7 623 aa12.21□□□□□ -0.45
SNRNP200-207ENST00000493271 MIOSQ9NXC5 875 aa12.21□□□□□ -0.45
SNRNP200-207ENST00000493271 HES2Q9Y543 173 aa12.21□□□□□ -0.45
SNRNP200-207ENST00000493271 CYP46A1Q9Y6A2 500 aa12.21□□□□□ -0.45
SNRNP200-207ENST00000493271 DOCK8Q8NF50 2099 aa12.21□□□□□ -0.45
SNRNP200-207ENST00000493271 TDRD15B5MCY1 1934 aaKnown RBP12.21□□□□□ -0.46
SNRNP200-207ENST00000493271 FRYLO94915 3013 aa12.21□□□□□ -0.46
SNRNP200-207ENST00000493271 STK36Q9NRP7 1315 aa12.2□□□□□ -0.46
SNRNP200-207ENST00000493271 NCAM2O15394 837 aa12.2□□□□□ -0.46
SNRNP200-207ENST00000493271 LAMTOR5O43504 91 aa12.2□□□□□ -0.46
SNRNP200-207ENST00000493271 SPATA31D3P0C874 917 aa12.2□□□□□ -0.46
SNRNP200-207ENST00000493271 ARL2P36404 184 aa12.2□□□□□ -0.46
SNRNP200-207ENST00000493271 SPIRE1Q08AE8 756 aa12.2□□□□□ -0.46
SNRNP200-207ENST00000493271 CAPSQ13938 189 aa12.2□□□□□ -0.46
SNRNP200-207ENST00000493271 UVSSAQ2YD98 709 aa12.2□□□□□ -0.46
SNRNP200-207ENST00000493271 PPM1LQ5SGD2 360 aa12.2□□□□□ -0.46
SNRNP200-207ENST00000493271 NCAPH2Q6IBW4 605 aa12.2□□□□□ -0.46
SNRNP200-207ENST00000493271 PPP4R3CPQ6ZMV5 832 aa12.2□□□□□ -0.46
SNRNP200-207ENST00000493271 SPATA31D4Q6ZUB0 917 aa12.2□□□□□ -0.46
SNRNP200-207ENST00000493271 SUMF1Q8NBK3 374 aa12.2□□□□□ -0.46
SNRNP200-207ENST00000493271 HAS1Q92839 578 aa12.2□□□□□ -0.46
SNRNP200-207ENST00000493271 DYDC2Q96IM9 177 aa12.2□□□□□ -0.46
SNRNP200-207ENST00000493271 CPB2Q96IY4 423 aa12.2□□□□□ -0.46
SNRNP200-207ENST00000493271 TTPALQ9BTX7 342 aa12.2□□□□□ -0.46
SNRNP200-207ENST00000493271 APOL6Q9BWW8 343 aa12.2□□□□□ -0.46
SNRNP200-207ENST00000493271 TM6SF1Q9BZW5 370 aa12.2□□□□□ -0.46
SNRNP200-207ENST00000493271 NXF3Q9H4D5 531 aaKnown RBP12.2□□□□□ -0.46
SNRNP200-207ENST00000493271 BMP2KQ9NSY1 1161 aaPredicted RBP12.2□□□□□ -0.46
SNRNP200-207ENST00000493271 PRMT7Q9NVM4 692 aaPredicted RBP12.2□□□□□ -0.46
SNRNP200-207ENST00000493271 RGL1Q9NZL6 768 aa12.2□□□□□ -0.46
SNRNP200-207ENST00000493271 KCNH3Q9ULD8 1083 aa12.2□□□□□ -0.46
SNRNP200-207ENST00000493271 PCDHGA2Q9Y5H1 932 aa12.2□□□□□ -0.46
SNRNP200-207ENST00000493271 DNAH14Q0VDD8 3507 aa12.2□□□□□ -0.46
SNRNP200-207ENST00000493271 FANCMQ8IYD8 2048 aa12.2□□□□□ -0.46
SNRNP200-207ENST00000493271 ARID2Q68CP9 1835 aa12.19□□□□□ -0.46
SNRNP200-207ENST00000493271 MED19A0JLT2 244 aaPredicted RBP12.19□□□□□ -0.46
SNRNP200-207ENST00000493271 SLITRK3O94933 977 aa12.19□□□□□ -0.46
SNRNP200-207ENST00000493271 C8AP07357 584 aa12.19□□□□□ -0.46
SNRNP200-207ENST00000493271 XRCC6P12956 609 aaKnown RBP eCLIP12.19□□□□□ -0.46
SNRNP200-207ENST00000493271 GPC5P78333 572 aa12.19□□□□□ -0.46
SNRNP200-207ENST00000493271 CYP4A11Q02928 519 aa12.19□□□□□ -0.46
SNRNP200-207ENST00000493271 CTTNQ14247 550 aaKnown RBP12.19□□□□□ -0.46
SNRNP200-207ENST00000493271 MLF2Q15773 248 aaPredicted RBP12.19□□□□□ -0.46
SNRNP200-207ENST00000493271 RTP2Q5QGT7 225 aa12.19□□□□□ -0.46
SNRNP200-207ENST00000493271 GRASPQ7Z6J2 395 aaPredicted RBP12.19□□□□□ -0.46
SNRNP200-207ENST00000493271 TPH2Q8IWU9 490 aa12.19□□□□□ -0.46
SNRNP200-207ENST00000493271 WASF1Q92558 559 aa12.19□□□□□ -0.46
SNRNP200-207ENST00000493271 FGF13Q92913 245 aa12.19□□□□□ -0.46
SNRNP200-207ENST00000493271 FGF14Q92915 247 aa12.19□□□□□ -0.46
SNRNP200-207ENST00000493271 HSD17B14Q9BPX1 270 aa12.19□□□□□ -0.46
SNRNP200-207ENST00000493271 FOXQ1Q9C009 403 aa12.19□□□□□ -0.46
SNRNP200-207ENST00000493271 SPATA6Q9NWH7 488 aaPredicted RBP12.19□□□□□ -0.46
SNRNP200-207ENST00000493271 PARP2Q9UGN5 583 aa12.19□□□□□ -0.46
SNRNP200-207ENST00000493271 PCDHA12Q9UN75 941 aa12.19□□□□□ -0.46
SNRNP200-207ENST00000493271 PRR5-ARHGAP8B1AHC4 643 aa12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 F8W810 466 aa12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 NPTXRO95502 500 aa12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 THP07101 528 aa12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 MYBP10242 640 aa12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 GLULP15104 373 aa12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 GLRA2P23416 452 aa12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 AKAP5P24588 427 aa12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 RARRES1P49788 294 aa12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 ARHGAP8P85298 464 aa12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 PSMD5Q16401 504 aa12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 FAM187BQ17R55 369 aa12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 SLC44A4Q53GD3 710 aa12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 VARS2Q5ST30 1063 aaKnown RBP12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 ZBTB41Q5SVQ8 909 aa12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 PARM1Q6UWI2 310 aa12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 PIK3AP1Q6ZUJ8 805 aa12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 GLYCTKQ8IVS8 523 aa12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 ZBTB8OSQ8IWT0 167 aa12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 MCPH1Q8NEM0 835 aa12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 LNX1Q8TBB1 728 aaPredicted RBP12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 B3GALT6Q96L58 329 aa12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 AIFM3Q96NN9 605 aa12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 EIF2AK1Q9BQI3 630 aaKnown RBP12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 CLSTN3Q9BQT9 956 aa12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 FAM126AQ9BYI3 521 aaPredicted RBP12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 C2orf40Q9H1Z8 148 aa12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 BRMS1Q9HCU9 246 aa12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 NCDNQ9UBB6 729 aa12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 KCNJ14Q9UNX9 436 aa12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 MRPS17Q9Y2R5 130 aaKnown RBP12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 OTOGLQ3ZCN5 2332 aa12.18□□□□□ -0.46
SNRNP200-207ENST00000493271 N4BP3O15049 544 aa12.17□□□□□ -0.46
SNRNP200-207ENST00000493271 RPL17P18621 184 aaKnown RBP12.17□□□□□ -0.46
SNRNP200-207ENST00000493271 RPS9P46781 194 aaKnown RBP12.17□□□□□ -0.46
SNRNP200-207ENST00000493271 SNW1Q13573 536 aaKnown RBP12.17□□□□□ -0.46
SNRNP200-207ENST00000493271 RAB33AQ14088 237 aa12.17□□□□□ -0.46
SNRNP200-207ENST00000493271 FAM171A1Q5VUB5 890 aa12.17□□□□□ -0.46
SNRNP200-207ENST00000493271 PRSS55Q6UWB4 352 aaPredicted RBP12.17□□□□□ -0.46
SNRNP200-207ENST00000493271 MAML2Q8IZL2 1156 aaPredicted RBP12.17□□□□□ -0.46
SNRNP200-207ENST00000493271 ZBTB44Q8NCP5 570 aa12.17□□□□□ -0.46
SNRNP200-207ENST00000493271 ASAP3Q8TDY4 903 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms