RNA–Protein interactions for RNA: ENST00000493256.1

LYSMD4-208, Transcript of LysM domain containing 4, humanhuman

TSL 3

Gene LYSMD4, Length 880 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-208ENST00000493256 CXCL16Q9H2A7 254 aa24.45■■□□□ 1.5
LYSMD4-208ENST00000493256 SNTG2Q9NY99 539 aa24.45■■□□□ 1.5
LYSMD4-208ENST00000493256 PTGESO14684 152 aa24.44■■□□□ 1.5
LYSMD4-208ENST00000493256 RECQL4O94761 1208 aa24.44■■□□□ 1.5
LYSMD4-208ENST00000493256 PDGFBP01127 241 aaPredicted RBP24.44■■□□□ 1.5
LYSMD4-208ENST00000493256 MYBP10242 640 aa24.44■■□□□ 1.5
LYSMD4-208ENST00000493256 VCPP55072 806 aaKnown RBP24.44■■□□□ 1.5
LYSMD4-208ENST00000493256 TUSC3Q13454 348 aa24.44■■□□□ 1.5
LYSMD4-208ENST00000493256 RABEP1Q15276 862 aa24.44■■□□□ 1.5
LYSMD4-208ENST00000493256 USP41Q3LFD5 358 aa24.44■■□□□ 1.5
LYSMD4-208ENST00000493256 CCDC149Q6ZUS6 474 aa24.44■■□□□ 1.5
LYSMD4-208ENST00000493256 ALYREFQ86V81 257 aaKnown RBP24.44■■□□□ 1.5
LYSMD4-208ENST00000493256 CMASQ8NFW8 434 aaPredicted RBP24.44■■□□□ 1.5
LYSMD4-208ENST00000493256 KIFAP3Q92845 792 aa24.44■■□□□ 1.5
LYSMD4-208ENST00000493256 IFT74Q96LB3 600 aa24.44■■□□□ 1.5
LYSMD4-208ENST00000493256 ADPGKQ9BRR6 497 aa24.44■■□□□ 1.5
LYSMD4-208ENST00000493256 PP2D1A8MPX8 630 aa24.43■■□□□ 1.5
LYSMD4-208ENST00000493256 HSP90AA2PQ14568 343 aaPredicted RBP24.43■■□□□ 1.5
LYSMD4-208ENST00000493256 RAB34Q9BZG1 259 aa24.43■■□□□ 1.5
LYSMD4-208ENST00000493256 STK24Q9Y6E0 443 aa24.43■■□□□ 1.5
LYSMD4-208ENST00000493256 CACNA1HO95180 2353 aa24.43■■□□□ 1.5
LYSMD4-208ENST00000493256 CCDC195A0A1B0GUA6 201 aa24.42■■□□□ 1.5
LYSMD4-208ENST00000493256 CASTOR2A6NHX0 329 aa24.42■■□□□ 1.5
LYSMD4-208ENST00000493256 TADA2AO75478 443 aa24.42■■□□□ 1.5
LYSMD4-208ENST00000493256 SPATA31D3P0C874 917 aa24.42■■□□□ 1.5
LYSMD4-208ENST00000493256 EFNA5P52803 228 aa24.42■■□□□ 1.5
LYSMD4-208ENST00000493256 IL17AQ16552 155 aa24.42■■□□□ 1.5
LYSMD4-208ENST00000493256 SPATA31D4Q6ZUB0 917 aa24.42■■□□□ 1.5
LYSMD4-208ENST00000493256 OTOP3Q7RTS5 596 aa24.42■■□□□ 1.5
LYSMD4-208ENST00000493256 PALB2Q86YC2 1186 aa24.42■■□□□ 1.5
LYSMD4-208ENST00000493256 GPR65Q8IYL9 337 aa24.42■■□□□ 1.5
LYSMD4-208ENST00000493256 HASPINQ8TF76 798 aa24.42■■□□□ 1.5
LYSMD4-208ENST00000493256 RIN2Q8WYP3 895 aaPredicted RBP24.42■■□□□ 1.5
LYSMD4-208ENST00000493256 ACSF2Q96CM8 615 aaPredicted RBP24.42■■□□□ 1.5
LYSMD4-208ENST00000493256 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.42■■□□□ 1.5
LYSMD4-208ENST00000493256 FNIP2Q9P278 1114 aa24.42■■□□□ 1.5
LYSMD4-208ENST00000493256 DPP7Q9UHL4 492 aa24.42■■□□□ 1.5
LYSMD4-208ENST00000493256 SF3B1O75533 1304 aaKnown RBP eCLIP24.41■■□□□ 1.5
LYSMD4-208ENST00000493256 E9PMD0 336 aa24.41■■□□□ 1.5
LYSMD4-208ENST00000493256 LAD1O00515 517 aa24.41■■□□□ 1.5
LYSMD4-208ENST00000493256 RFPL2O75678 378 aa24.41■■□□□ 1.5
LYSMD4-208ENST00000493256 KIF4AO95239 1232 aa24.41■■□□□ 1.5
LYSMD4-208ENST00000493256 THP07101 528 aa24.41■■□□□ 1.5
LYSMD4-208ENST00000493256 RPL17P18621 184 aaKnown RBP24.41■■□□□ 1.5
LYSMD4-208ENST00000493256 NAB2Q15742 525 aa24.41■■□□□ 1.5
LYSMD4-208ENST00000493256 DCAF4L1Q3SXM0 396 aa24.41■■□□□ 1.5
LYSMD4-208ENST00000493256 NT5DC1Q5TFE4 455 aa24.41■■□□□ 1.5
LYSMD4-208ENST00000493256 ELMSAN1Q6PJG2 1045 aa24.41■■□□□ 1.5
LYSMD4-208ENST00000493256 GLYCTKQ8IVS8 523 aa24.41■■□□□ 1.5
LYSMD4-208ENST00000493256 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.41■■□□□ 1.5
LYSMD4-208ENST00000493256 GDAQ9Y2T3 454 aa24.41■■□□□ 1.5
LYSMD4-208ENST00000493256 MTCL1Q9Y4B5 1905 aaKnown RBP24.41■■□□□ 1.5
LYSMD4-208ENST00000493256 TGM5O43548 720 aa24.4■■□□□ 1.5
LYSMD4-208ENST00000493256 ST18O60284 1047 aa24.4■■□□□ 1.5
LYSMD4-208ENST00000493256 CDC25AP30304 524 aa24.4■■□□□ 1.5
LYSMD4-208ENST00000493256 AVPR2P30518 371 aa24.4■■□□□ 1.5
LYSMD4-208ENST00000493256 PRPHP41219 470 aa24.4■■□□□ 1.5
LYSMD4-208ENST00000493256 RTP2Q5QGT7 225 aa24.4■■□□□ 1.5
LYSMD4-208ENST00000493256 ATF7IP2Q5U623 682 aa24.4■■□□□ 1.5
LYSMD4-208ENST00000493256 KRT79Q5XKE5 535 aa24.4■■□□□ 1.5
LYSMD4-208ENST00000493256 MCTP1Q6DN14 999 aa24.4■■□□□ 1.5
LYSMD4-208ENST00000493256 DAW1Q8N136 415 aa24.4■■□□□ 1.5
LYSMD4-208ENST00000493256 HDAC7Q8WUI4 952 aa24.4■■□□□ 1.5
LYSMD4-208ENST00000493256 RHOBTB2Q9BYZ6 727 aa24.4■■□□□ 1.5
LYSMD4-208ENST00000493256 DNM3Q9UQ16 869 aa24.4■■□□□ 1.5
LYSMD4-208ENST00000493256 KIF3AQ9Y496 699 aa24.4■■□□□ 1.5
LYSMD4-208ENST00000493256 C1RP00736 705 aa24.39■■□□□ 1.49
LYSMD4-208ENST00000493256 MRE11P49959 708 aa24.39■■□□□ 1.49
LYSMD4-208ENST00000493256 CREMQ03060 361 aa24.39■■□□□ 1.49
LYSMD4-208ENST00000493256 LILRA6Q6PI73 481 aa24.39■■□□□ 1.49
LYSMD4-208ENST00000493256 PRSS55Q6UWB4 352 aaPredicted RBP24.39■■□□□ 1.49
LYSMD4-208ENST00000493256 CYP26C1Q6V0L0 522 aa24.39■■□□□ 1.49
LYSMD4-208ENST00000493256 DTHD1Q6ZMT9 781 aa24.39■■□□□ 1.49
LYSMD4-208ENST00000493256 ZNF707Q96C28 371 aaPredicted RBP24.39■■□□□ 1.49
LYSMD4-208ENST00000493256 PRRX2Q99811 253 aa24.39■■□□□ 1.49
LYSMD4-208ENST00000493256 MMTAG2Q9BU76 263 aaKnown RBP24.39■■□□□ 1.49
LYSMD4-208ENST00000493256 PLEKHA4Q9H4M7 779 aa24.39■■□□□ 1.49
LYSMD4-208ENST00000493256 K7ERI5 159 aa24.38■■□□□ 1.49
LYSMD4-208ENST00000493256 N4BP1O75113 896 aaKnown RBP24.38■■□□□ 1.49
LYSMD4-208ENST00000493256 CD2BP2O95400 341 aaKnown RBP24.38■■□□□ 1.49
LYSMD4-208ENST00000493256 NPTX2P47972 431 aa24.38■■□□□ 1.49
LYSMD4-208ENST00000493256 PTPN5P54829 565 aa24.38■■□□□ 1.49
LYSMD4-208ENST00000493256 PEX3P56589 373 aa24.38■■□□□ 1.49
LYSMD4-208ENST00000493256 TCF15Q12870 199 aa24.38■■□□□ 1.49
LYSMD4-208ENST00000493256 KCNK18Q7Z418 384 aa24.38■■□□□ 1.49
LYSMD4-208ENST00000493256 SMG7Q92540 1137 aaKnown RBP24.38■■□□□ 1.49
LYSMD4-208ENST00000493256 TMX3Q96JJ7 454 aa24.38■■□□□ 1.49
LYSMD4-208ENST00000493256 TTPALQ9BTX7 342 aa24.38■■□□□ 1.49
LYSMD4-208ENST00000493256 RUSC1Q9BVN2 902 aa24.38■■□□□ 1.49
LYSMD4-208ENST00000493256 WDR6Q9NNW5 1121 aaKnown RBP24.38■■□□□ 1.49
LYSMD4-208ENST00000493256 TRIP11Q15643 1979 aa24.38■■□□□ 1.49
LYSMD4-208ENST00000493256 CLUHO75153 1309 aa24.37■■□□□ 1.49
LYSMD4-208ENST00000493256 CCDC169A6NNP5 214 aa24.37■■□□□ 1.49
LYSMD4-208ENST00000493256 HIP1RO75146 1068 aa24.37■■□□□ 1.49
LYSMD4-208ENST00000493256 PAPLNO95428 1278 aa24.37■■□□□ 1.49
LYSMD4-208ENST00000493256 MAPK7Q13164 816 aa24.37■■□□□ 1.49
LYSMD4-208ENST00000493256 FAM171A1Q5VUB5 890 aa24.37■■□□□ 1.49
LYSMD4-208ENST00000493256 NT5C3AQ9H0P0 336 aa24.37■■□□□ 1.49
LYSMD4-208ENST00000493256 TNFSF13BQ9Y275 285 aa24.37■■□□□ 1.49
LYSMD4-208ENST00000493256 PHLPP2Q6ZVD8 1323 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms