RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 SIK2Q9H0K1 926 aa17.25■□□□□ 0.35
BRAT1-206ENST00000493232 DYRK4Q9NR20 520 aa17.25■□□□□ 0.35
BRAT1-206ENST00000493232 SPATS2LQ9NUQ6 558 aaKnown RBP17.25■□□□□ 0.35
BRAT1-206ENST00000493232 PDS5AQ29RF7 1337 aaKnown RBP17.24■□□□□ 0.35
BRAT1-206ENST00000493232 IQGAP3Q86VI3 1631 aa17.24■□□□□ 0.35
BRAT1-206ENST00000493232 KIF28PB7ZC32 967 aa17.24■□□□□ 0.35
BRAT1-206ENST00000493232 TEX33O43247 280 aa17.24■□□□□ 0.35
BRAT1-206ENST00000493232 MCF2P10911 925 aa17.24■□□□□ 0.35
BRAT1-206ENST00000493232 GGCXP38435 758 aa17.24■□□□□ 0.35
BRAT1-206ENST00000493232 EXOSC10Q01780 885 aaKnown RBP17.24■□□□□ 0.35
BRAT1-206ENST00000493232 ATG9AQ7Z3C6 839 aa17.24■□□□□ 0.35
BRAT1-206ENST00000493232 TRIM9Q9C026 710 aa17.24■□□□□ 0.35
BRAT1-206ENST00000493232 UVRAGQ9P2Y5 699 aa17.24■□□□□ 0.35
BRAT1-206ENST00000493232 LIMA1Q9UHB6 759 aaKnown RBP17.24■□□□□ 0.35
BRAT1-206ENST00000493232 STK25O00506 426 aa17.24■□□□□ 0.35
BRAT1-206ENST00000493232 TYK2P29597 1187 aa17.24■□□□□ 0.35
BRAT1-206ENST00000493232 DHX40Q8IX18 779 aaKnown RBP17.24■□□□□ 0.35
BRAT1-206ENST00000493232 PIN4Q9Y237 131 aaKnown RBP17.24■□□□□ 0.35
BRAT1-206ENST00000493232 PYGLP06737 847 aa17.24■□□□□ 0.35
BRAT1-206ENST00000493232 TAS2R42Q7RTR8 314 aa17.24■□□□□ 0.35
BRAT1-206ENST00000493232 SPATA2LQ8IUW3 424 aaPredicted RBP17.24■□□□□ 0.35
BRAT1-206ENST00000493232 GRAMD1AQ96CP6 724 aa17.24■□□□□ 0.35
BRAT1-206ENST00000493232 ZNF512BQ96KM6 892 aaPredicted RBP17.24■□□□□ 0.35
BRAT1-206ENST00000493232 HSPBP1Q9NZL4 362 aa17.24■□□□□ 0.35
BRAT1-206ENST00000493232 FLT1P17948 1338 aa17.24■□□□□ 0.35
BRAT1-206ENST00000493232 GMNCA6NCL1 334 aa17.24■□□□□ 0.35
BRAT1-206ENST00000493232 NBPF26B4DH59 902 aa17.24■□□□□ 0.35
BRAT1-206ENST00000493232 PIK3R2O00459 728 aa17.24■□□□□ 0.35
BRAT1-206ENST00000493232 MAGEB2O15479 319 aa17.24■□□□□ 0.35
BRAT1-206ENST00000493232 CYP2C19P33261 490 aa17.24■□□□□ 0.35
BRAT1-206ENST00000493232 ACTR2P61160 394 aa17.24■□□□□ 0.35
BRAT1-206ENST00000493232 NBPF10Q6P3W6 841 aaKnown RBP17.24■□□□□ 0.35
BRAT1-206ENST00000493232 PID1Q7Z2X4 250 aa17.24■□□□□ 0.35
BRAT1-206ENST00000493232 TTC30AQ86WT1 665 aa17.24■□□□□ 0.35
BRAT1-206ENST00000493232 RCOR2Q8IZ40 523 aa17.24■□□□□ 0.35
BRAT1-206ENST00000493232 RAB42Q8N4Z0 105 aa17.24■□□□□ 0.35
BRAT1-206ENST00000493232 NBPF15Q8N660 670 aa17.24■□□□□ 0.35
BRAT1-206ENST00000493232 HIPK4Q8NE63 616 aa17.24■□□□□ 0.35
BRAT1-206ENST00000493232 STOML1Q9UBI4 398 aa17.24■□□□□ 0.35
BRAT1-206ENST00000493232 CYBBP04839 570 aa17.23■□□□□ 0.35
BRAT1-206ENST00000493232 AARSP49588 968 aaKnown RBP eCLIP17.23■□□□□ 0.35
BRAT1-206ENST00000493232 TPI1P60174 286 aa17.23■□□□□ 0.35
BRAT1-206ENST00000493232 STAT4Q14765 748 aa17.23■□□□□ 0.35
BRAT1-206ENST00000493232 C1orf146Q5VVC0 180 aa17.23■□□□□ 0.35
BRAT1-206ENST00000493232 ANKRD40Q6AI12 368 aa17.23■□□□□ 0.35
BRAT1-206ENST00000493232 MTHFD1LQ6UB35 978 aa17.23■□□□□ 0.35
BRAT1-206ENST00000493232 C18orf8Q96DM3 657 aa17.23■□□□□ 0.35
BRAT1-206ENST00000493232 ZNF668Q96K58 619 aaPredicted RBP17.23■□□□□ 0.35
BRAT1-206ENST00000493232 PHF20Q9BVI0 1012 aa17.23■□□□□ 0.35
BRAT1-206ENST00000493232 GPBP1L1Q9HC44 474 aaPredicted RBP17.23■□□□□ 0.35
BRAT1-206ENST00000493232 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.23■□□□□ 0.35
BRAT1-206ENST00000493232 NDFIP2Q9NV92 336 aa17.23■□□□□ 0.35
BRAT1-206ENST00000493232 SCHIP1Q9P0W5 487 aaPredicted RBP17.23■□□□□ 0.35
BRAT1-206ENST00000493232 GLI2P10070 1586 aa17.23■□□□□ 0.35
BRAT1-206ENST00000493232 USP42Q9H9J4 1324 aaKnown RBP17.23■□□□□ 0.35
BRAT1-206ENST00000493232 TARSL2A2RTX5 802 aaKnown RBP17.23■□□□□ 0.35
BRAT1-206ENST00000493232 KCTD17Q8N5Z5 321 aa17.23■□□□□ 0.35
BRAT1-206ENST00000493232 ATL2Q8NHH9 583 aa17.23■□□□□ 0.35
BRAT1-206ENST00000493232 SH3KBP1Q96B97 665 aa17.23■□□□□ 0.35
BRAT1-206ENST00000493232 MED14O60244 1454 aa17.23■□□□□ 0.35
BRAT1-206ENST00000493232 UBA6A0AVT1 1052 aaPredicted RBP17.23■□□□□ 0.35
BRAT1-206ENST00000493232 CCDC22O60826 627 aa17.23■□□□□ 0.35
BRAT1-206ENST00000493232 DIAPH2O60879 1101 aa17.23■□□□□ 0.35
BRAT1-206ENST00000493232 SCP2P22307 547 aa17.23■□□□□ 0.35
BRAT1-206ENST00000493232 NMT1P30419 496 aaKnown RBP17.23■□□□□ 0.35
BRAT1-206ENST00000493232 RFC5P40937 340 aa17.23■□□□□ 0.35
BRAT1-206ENST00000493232 HHIPL2Q6UWX4 724 aa17.23■□□□□ 0.35
BRAT1-206ENST00000493232 APPL2Q8NEU8 664 aa17.23■□□□□ 0.35
BRAT1-206ENST00000493232 SEPT1Q8WYJ6 367 aa17.23■□□□□ 0.35
BRAT1-206ENST00000493232 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.23■□□□□ 0.35
BRAT1-206ENST00000493232 TGS1Q96RS0 853 aaKnown RBP17.23■□□□□ 0.35
BRAT1-206ENST00000493232 STK33Q9BYT3 514 aa17.23■□□□□ 0.35
BRAT1-206ENST00000493232 ALKQ9UM73 1620 aa17.23■□□□□ 0.35
BRAT1-206ENST00000493232 CHUKO15111 745 aa17.23■□□□□ 0.35
BRAT1-206ENST00000493232 LCP1P13796 627 aa17.23■□□□□ 0.35
BRAT1-206ENST00000493232 SCARF1Q14162 830 aa17.23■□□□□ 0.35
BRAT1-206ENST00000493232 BEND6Q5SZJ8 279 aaPredicted RBP17.23■□□□□ 0.35
BRAT1-206ENST00000493232 KIRREL3Q8IZU9 778 aa17.23■□□□□ 0.35
BRAT1-206ENST00000493232 SLC26A7Q8TE54 656 aa17.23■□□□□ 0.35
BRAT1-206ENST00000493232 THOC1Q96FV9 657 aaKnown RBP17.23■□□□□ 0.35
BRAT1-206ENST00000493232 C7orf25Q9BPX7 421 aa17.23■□□□□ 0.35
BRAT1-206ENST00000493232 ING2Q9H160 280 aa17.23■□□□□ 0.35
BRAT1-206ENST00000493232 EML4Q9HC35 981 aaKnown RBP17.23■□□□□ 0.35
BRAT1-206ENST00000493232 CYP26A1O43174 497 aa17.22■□□□□ 0.35
BRAT1-206ENST00000493232 EIF3EP60228 445 aaKnown RBP17.22■□□□□ 0.35
BRAT1-206ENST00000493232 WDR72Q3MJ13 1102 aa17.22■□□□□ 0.35
BRAT1-206ENST00000493232 MICALL2Q8IY33 904 aa17.22■□□□□ 0.35
BRAT1-206ENST00000493232 PPHLN1Q8NEY8 458 aaKnown RBP17.22■□□□□ 0.35
BRAT1-206ENST00000493232 RMDN1Q96DB5 314 aa17.22■□□□□ 0.35
BRAT1-206ENST00000493232 RNPC3Q96LT9 517 aaKnown RBP17.22■□□□□ 0.35
BRAT1-206ENST00000493232 APEX2Q9UBZ4 518 aa17.22■□□□□ 0.35
BRAT1-206ENST00000493232 ARSEP51690 589 aa17.22■□□□□ 0.35
BRAT1-206ENST00000493232 ATP6V1G3Q96LB4 118 aa17.22■□□□□ 0.35
BRAT1-206ENST00000493232 SNX5Q9Y5X3 404 aa17.22■□□□□ 0.35
BRAT1-206ENST00000493232 CCDC195A0A1B0GUA6 201 aa17.22■□□□□ 0.35
BRAT1-206ENST00000493232 DFFAO00273 331 aa17.22■□□□□ 0.35
BRAT1-206ENST00000493232 KRT17Q04695 432 aa17.22■□□□□ 0.35
BRAT1-206ENST00000493232 KCNA1Q09470 495 aa17.22■□□□□ 0.35
BRAT1-206ENST00000493232 HIF1AQ16665 826 aa17.22■□□□□ 0.35
BRAT1-206ENST00000493232 GH1P01241 217 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms