RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 BICDL2A1A5D9 508 aa14.67□□□□□ -0.06
MSH6-208ENST00000493177 C5orf67F2Z3F1 127 aa14.67□□□□□ -0.06
MSH6-208ENST00000493177 CALUO43852 315 aaPredicted RBP14.67□□□□□ -0.06
MSH6-208ENST00000493177 CCNE1P24864 410 aa14.67□□□□□ -0.06
MSH6-208ENST00000493177 MATR3P43243 847 aaKnown RBP eCLIP14.67□□□□□ -0.06
MSH6-208ENST00000493177 LIG4P49917 911 aa14.67□□□□□ -0.06
MSH6-208ENST00000493177 TFF2Q03403 129 aa14.67□□□□□ -0.06
MSH6-208ENST00000493177 NCBP1Q09161 790 aaKnown RBP14.67□□□□□ -0.06
MSH6-208ENST00000493177 PRPF4BQ13523 1007 aaKnown RBP14.67□□□□□ -0.06
MSH6-208ENST00000493177 TPD52L1Q16890 204 aaPredicted RBP14.67□□□□□ -0.06
MSH6-208ENST00000493177 HS2ST1Q7LGA3 356 aa14.67□□□□□ -0.06
MSH6-208ENST00000493177 TAS1R3Q7RTX0 852 aa14.67□□□□□ -0.06
MSH6-208ENST00000493177 CLP1Q92989 425 aaKnown RBP14.67□□□□□ -0.06
MSH6-208ENST00000493177 P2RX5Q93086 422 aa14.67□□□□□ -0.06
MSH6-208ENST00000493177 MRPL4Q9BYD3 311 aaKnown RBP14.67□□□□□ -0.06
MSH6-208ENST00000493177 CCDC113Q9H0I3 377 aa14.67□□□□□ -0.06
MSH6-208ENST00000493177 GBP3Q9H0R5 595 aa14.67□□□□□ -0.06
MSH6-208ENST00000493177 LMAN2LQ9H0V9 348 aa14.67□□□□□ -0.06
MSH6-208ENST00000493177 NSUN3Q9H649 340 aaKnown RBP14.67□□□□□ -0.06
MSH6-208ENST00000493177 ALG13Q9NP73 1137 aaKnown RBP14.67□□□□□ -0.06
MSH6-208ENST00000493177 USP20Q9Y2K6 914 aa14.67□□□□□ -0.06
MSH6-208ENST00000493177 COL6A3P12111 3177 aa14.66□□□□□ -0.06
MSH6-208ENST00000493177 ACKR2O00590 384 aa14.66□□□□□ -0.06
MSH6-208ENST00000493177 HNRNPDLO14979 420 aaKnown RBP14.66□□□□□ -0.06
MSH6-208ENST00000493177 SKIP12755 728 aa14.66□□□□□ -0.06
MSH6-208ENST00000493177 ERCC5P28715 1186 aaPredicted RBP14.66□□□□□ -0.06
MSH6-208ENST00000493177 ZNF165P49910 485 aa14.66□□□□□ -0.06
MSH6-208ENST00000493177 DSC3Q14574 896 aa14.66□□□□□ -0.06
MSH6-208ENST00000493177 CT47A1Q5JQC4 288 aaPredicted RBP14.66□□□□□ -0.06
MSH6-208ENST00000493177 ECHDC2Q86YB7 292 aa14.66□□□□□ -0.06
MSH6-208ENST00000493177 THNSL1Q8IYQ7 743 aa14.66□□□□□ -0.06
MSH6-208ENST00000493177 PPP2R3CQ969Q6 453 aa14.66□□□□□ -0.06
MSH6-208ENST00000493177 TARS2Q9BW92 718 aaKnown RBP14.66□□□□□ -0.06
MSH6-208ENST00000493177 TMEM117Q9H0C3 514 aa14.66□□□□□ -0.06
MSH6-208ENST00000493177 IKZF4Q9H2S9 585 aa14.66□□□□□ -0.06
MSH6-208ENST00000493177 FZD8Q9H461 694 aa14.66□□□□□ -0.06
MSH6-208ENST00000493177 CHST12Q9NRB3 414 aa14.66□□□□□ -0.06
MSH6-208ENST00000493177 TYW1Q9NV66 732 aaKnown RBP14.66□□□□□ -0.06
MSH6-208ENST00000493177 RWDD2AQ9UIY3 292 aa14.66□□□□□ -0.06
MSH6-208ENST00000493177 ZMYM2Q9UBW7 1377 aa14.65□□□□□ -0.06
MSH6-208ENST00000493177 TRIM49BA6NDI0 452 aa14.65□□□□□ -0.06
MSH6-208ENST00000493177 BECN2A8MW95 431 aa14.65□□□□□ -0.06
MSH6-208ENST00000493177 CLIC2O15247 247 aa14.65□□□□□ -0.06
MSH6-208ENST00000493177 GRM6O15303 877 aa14.65□□□□□ -0.06
MSH6-208ENST00000493177 B4GALT5O43286 388 aa14.65□□□□□ -0.06
MSH6-208ENST00000493177 CAVIN2O95810 425 aa14.65□□□□□ -0.06
MSH6-208ENST00000493177 HARSP12081 509 aaKnown RBP14.65□□□□□ -0.06
MSH6-208ENST00000493177 LAG3P18627 525 aa14.65□□□□□ -0.06
MSH6-208ENST00000493177 HOXD13P35453 343 aa14.65□□□□□ -0.06
MSH6-208ENST00000493177 FAM187BQ17R55 369 aa14.65□□□□□ -0.06
MSH6-208ENST00000493177 TCEAL5Q5H9L2 206 aa14.65□□□□□ -0.06
MSH6-208ENST00000493177 ATF7IP2Q5U623 682 aa14.65□□□□□ -0.06
MSH6-208ENST00000493177 ANKRD40Q6AI12 368 aa14.65□□□□□ -0.06
MSH6-208ENST00000493177 CENPPQ6IPU0 288 aa14.65□□□□□ -0.06
MSH6-208ENST00000493177 PPP4R3CPQ6ZMV5 832 aa14.65□□□□□ -0.06
MSH6-208ENST00000493177 LRRC43Q8N309 656 aa14.65□□□□□ -0.06
MSH6-208ENST00000493177 AOPEPQ8N6M6 819 aa14.65□□□□□ -0.06
MSH6-208ENST00000493177 KLHL23Q8NBE8 558 aa14.65□□□□□ -0.06
MSH6-208ENST00000493177 GOLGA5Q8TBA6 731 aa14.65□□□□□ -0.06
MSH6-208ENST00000493177 NOC3LQ8WTT2 800 aaKnown RBP14.65□□□□□ -0.06
MSH6-208ENST00000493177 KCNN1Q92952 543 aa14.65□□□□□ -0.06
MSH6-208ENST00000493177 CPB2Q96IY4 423 aa14.65□□□□□ -0.06
MSH6-208ENST00000493177 PRIMPOLQ96LW4 560 aa14.65□□□□□ -0.06
MSH6-208ENST00000493177 TCHPQ9BT92 498 aa14.65□□□□□ -0.06
MSH6-208ENST00000493177 KCTD10Q9H3F6 313 aa14.65□□□□□ -0.06
MSH6-208ENST00000493177 UBE2ZQ9H832 354 aaPredicted RBP14.65□□□□□ -0.06
MSH6-208ENST00000493177 CDH23Q9H251 3354 aa14.65□□□□□ -0.06
MSH6-208ENST00000493177 SMTNL1A8MU46 457 aa14.64□□□□□ -0.07
MSH6-208ENST00000493177 TISP43B9A030 160 aa14.64□□□□□ -0.07
MSH6-208ENST00000493177 ANKRD63C9JTQ0 380 aa14.64□□□□□ -0.07
MSH6-208ENST00000493177 PDXKO00764 312 aa14.64□□□□□ -0.07
MSH6-208ENST00000493177 TGFB1I1O43294 461 aa14.64□□□□□ -0.07
MSH6-208ENST00000493177 TSPAN1O60635 241 aa14.64□□□□□ -0.07
MSH6-208ENST00000493177 EOMESO95936 686 aa14.64□□□□□ -0.07
MSH6-208ENST00000493177 EDN1P05305 212 aa14.64□□□□□ -0.07
MSH6-208ENST00000493177 RAB27AP51159 221 aa14.64□□□□□ -0.07
MSH6-208ENST00000493177 KCNQ1P51787 676 aa14.64□□□□□ -0.07
MSH6-208ENST00000493177 PMS1P54277 932 aaKnown RBP14.64□□□□□ -0.07
MSH6-208ENST00000493177 LRRC63Q05C16 580 aa14.64□□□□□ -0.07
MSH6-208ENST00000493177 PCBP1Q15365 356 aaKnown RBP eCLIP14.64□□□□□ -0.07
MSH6-208ENST00000493177 AMHR2Q16671 573 aa14.64□□□□□ -0.07
MSH6-208ENST00000493177 ARMCX5Q6P1M9 558 aa14.64□□□□□ -0.07
MSH6-208ENST00000493177 ZPBP2Q6X784 338 aa14.64□□□□□ -0.07
MSH6-208ENST00000493177 CRIPAKQ8N1N5 446 aa14.64□□□□□ -0.07
MSH6-208ENST00000493177 RNF214Q8ND24 703 aa14.64□□□□□ -0.07
MSH6-208ENST00000493177 FAM200AQ8TCP9 573 aa14.64□□□□□ -0.07
MSH6-208ENST00000493177 HELQQ8TDG4 1101 aa14.64□□□□□ -0.07
MSH6-208ENST00000493177 MICAL1Q8TDZ2 1067 aa14.64□□□□□ -0.07
MSH6-208ENST00000493177 ADAMTS19Q8TE59 1207 aa14.64□□□□□ -0.07
MSH6-208ENST00000493177 POF1BQ8WVV4 589 aa14.64□□□□□ -0.07
MSH6-208ENST00000493177 ACO2Q99798 780 aaKnown RBP14.64□□□□□ -0.07
MSH6-208ENST00000493177 MRPL9Q9BYD2 267 aaKnown RBP14.64□□□□□ -0.07
MSH6-208ENST00000493177 IGFLR1Q9H665 355 aa14.64□□□□□ -0.07
MSH6-208ENST00000493177 CBX8Q9HC52 389 aa14.64□□□□□ -0.07
MSH6-208ENST00000493177 AGPAT3Q9NRZ7 376 aa14.64□□□□□ -0.07
MSH6-208ENST00000493177 CLDND1Q9NY35 253 aa14.64□□□□□ -0.07
MSH6-208ENST00000493177 ANKFY1Q9P2R3 1169 aa14.64□□□□□ -0.07
MSH6-208ENST00000493177 PLAGL2Q9UPG8 496 aa14.64□□□□□ -0.07
MSH6-208ENST00000493177 CNTNAP2Q9UHC6 1331 aa14.64□□□□□ -0.07
MSH6-208ENST00000493177 A0A0U1RQF3 1178 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms