RNA–Protein interactions for RNA: ENST00000492496.1

PKP4-214, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-214ENST00000492496 H3BQ06 376 aaPredicted RBP17.49■□□□□ 0.39
PKP4-214ENST00000492496 ABLIM1O14639 778 aa17.49■□□□□ 0.39
PKP4-214ENST00000492496 TRAK2O60296 914 aa17.49■□□□□ 0.39
PKP4-214ENST00000492496 CUTAO60888 179 aa17.49■□□□□ 0.39
PKP4-214ENST00000492496 TBX10O75333 385 aa17.49■□□□□ 0.39
PKP4-214ENST00000492496 TBCAO75347 108 aaKnown RBP17.49■□□□□ 0.39
PKP4-214ENST00000492496 THP07101 528 aa17.49■□□□□ 0.39
PKP4-214ENST00000492496 MCF2P10911 925 aa17.49■□□□□ 0.39
PKP4-214ENST00000492496 GRM5P41594 1212 aa17.49■□□□□ 0.39
PKP4-214ENST00000492496 STAT6P42226 847 aa17.49■□□□□ 0.39
PKP4-214ENST00000492496 NDUFV1P49821 464 aa17.49■□□□□ 0.39
PKP4-214ENST00000492496 SV2BQ7L1I2 683 aa17.49■□□□□ 0.39
PKP4-214ENST00000492496 CCDC94Q9BW85 323 aaPredicted RBP17.49■□□□□ 0.39
PKP4-214ENST00000492496 COLEC11Q9BWP8 271 aa17.49■□□□□ 0.39
PKP4-214ENST00000492496 MARCH5Q9NX47 278 aa17.49■□□□□ 0.39
PKP4-214ENST00000492496 FAM50BQ9Y247 325 aa17.49■□□□□ 0.39
PKP4-214ENST00000492496 GDAQ9Y2T3 454 aa17.49■□□□□ 0.39
PKP4-214ENST00000492496 PDCD11Q14690 1871 aaKnown RBP17.49■□□□□ 0.39
PKP4-214ENST00000492496 GRXCR2A6NFK2 248 aa17.48■□□□□ 0.39
PKP4-214ENST00000492496 PTGESO14684 152 aa17.48■□□□□ 0.39
PKP4-214ENST00000492496 PER2O15055 1255 aa17.48■□□□□ 0.39
PKP4-214ENST00000492496 TOM1L1O75674 476 aa17.48■□□□□ 0.39
PKP4-214ENST00000492496 CXCL14O95715 111 aa17.48■□□□□ 0.39
PKP4-214ENST00000492496 GLP2RO95838 553 aa17.48■□□□□ 0.39
PKP4-214ENST00000492496 SRGAP2BP0DMP2 458 aa17.48■□□□□ 0.39
PKP4-214ENST00000492496 DLX2Q07687 328 aaPredicted RBP17.48■□□□□ 0.39
PKP4-214ENST00000492496 TUSC3Q13454 348 aa17.48■□□□□ 0.39
PKP4-214ENST00000492496 KCNC3Q14003 757 aa17.48■□□□□ 0.39
PKP4-214ENST00000492496 PTCRAQ6ISU1 281 aaPredicted RBP17.48■□□□□ 0.39
PKP4-214ENST00000492496 TMEM184AQ6ZMB5 413 aa17.48■□□□□ 0.39
PKP4-214ENST00000492496 UHRF1Q96T88 793 aaPredicted RBP17.48■□□□□ 0.39
PKP4-214ENST00000492496 TCHPQ9BT92 498 aa17.48■□□□□ 0.39
PKP4-214ENST00000492496 VN1R3Q9BXE9 311 aa17.48■□□□□ 0.39
PKP4-214ENST00000492496 ZHX3Q9H4I2 956 aa17.48■□□□□ 0.39
PKP4-214ENST00000492496 TCHHQ07283 1943 aa17.48■□□□□ 0.39
PKP4-214ENST00000492496 A0A087X0B3 334 aa17.47■□□□□ 0.39
PKP4-214ENST00000492496 K7ENM7 598 aa17.47■□□□□ 0.39
PKP4-214ENST00000492496 SOD2P04179 222 aa17.47■□□□□ 0.39
PKP4-214ENST00000492496 YARSP54577 528 aaKnown RBP17.47■□□□□ 0.39
PKP4-214ENST00000492496 BECN1Q14457 450 aa17.47■□□□□ 0.39
PKP4-214ENST00000492496 NOLC1Q14978 699 aaKnown RBP eCLIP17.47■□□□□ 0.39
PKP4-214ENST00000492496 DYMQ7RTS9 669 aa17.47■□□□□ 0.39
PKP4-214ENST00000492496 FAM178BQ8IXR5 827 aa17.47■□□□□ 0.39
PKP4-214ENST00000492496 DDX12PQ92771 950 aa17.47■□□□□ 0.39
PKP4-214ENST00000492496 MSLNLQ96KJ4 702 aa17.47■□□□□ 0.39
PKP4-214ENST00000492496 FIZ1Q96SL8 496 aa17.47■□□□□ 0.39
PKP4-214ENST00000492496 TOPORSQ9NS56 1045 aaPredicted RBP17.47■□□□□ 0.39
PKP4-214ENST00000492496 CLEC1BQ9P126 229 aa17.47■□□□□ 0.39
PKP4-214ENST00000492496 SEL1LQ9UBV2 794 aa17.47■□□□□ 0.39
PKP4-214ENST00000492496 CD207Q9UJ71 328 aa17.47■□□□□ 0.39
PKP4-214ENST00000492496 TBX20Q9UMR3 447 aa17.47■□□□□ 0.39
PKP4-214ENST00000492496 SSX2IPQ9Y2D8 614 aa17.47■□□□□ 0.39
PKP4-214ENST00000492496 PRG3Q9Y2Y8 225 aaPredicted RBP17.47■□□□□ 0.39
PKP4-214ENST00000492496 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.46■□□□□ 0.39
PKP4-214ENST00000492496 MYMKA6NI61 221 aa17.46■□□□□ 0.39
PKP4-214ENST00000492496 EFEMP2O95967 443 aa17.46■□□□□ 0.39
PKP4-214ENST00000492496 PIGRP01833 764 aa17.46■□□□□ 0.39
PKP4-214ENST00000492496 DNM1Q05193 864 aaKnown RBP17.46■□□□□ 0.39
PKP4-214ENST00000492496 MCL1Q07820 350 aa17.46■□□□□ 0.39
PKP4-214ENST00000492496 COASYQ13057 564 aa17.46■□□□□ 0.39
PKP4-214ENST00000492496 NAB2Q15742 525 aa17.46■□□□□ 0.39
PKP4-214ENST00000492496 FOXD4L6Q3SYB3 417 aaPredicted RBP17.46■□□□□ 0.39
PKP4-214ENST00000492496 XKR4Q5GH76 650 aa17.46■□□□□ 0.39
PKP4-214ENST00000492496 FOXD4L3Q6VB84 417 aaPredicted RBP17.46■□□□□ 0.39
PKP4-214ENST00000492496 ZBTB33Q86T24 672 aa17.46■□□□□ 0.39
PKP4-214ENST00000492496 RNF168Q8IYW5 571 aaPredicted RBP17.46■□□□□ 0.39
PKP4-214ENST00000492496 CEP120Q8N960 986 aa17.46■□□□□ 0.39
PKP4-214ENST00000492496 DNAJC19Q96DA6 116 aa17.46■□□□□ 0.39
PKP4-214ENST00000492496 ZBTB45Q96K62 511 aaPredicted RBP17.46■□□□□ 0.39
PKP4-214ENST00000492496 ACAP3Q96P50 834 aa17.46■□□□□ 0.39
PKP4-214ENST00000492496 HERC2P3Q9BVR0 1158 aa17.46■□□□□ 0.39
PKP4-214ENST00000492496 PANK2Q9BZ23 570 aa17.46■□□□□ 0.39
PKP4-214ENST00000492496 CUEDC2Q9H467 287 aa17.46■□□□□ 0.39
PKP4-214ENST00000492496 ST6GALNAC4Q9H4F1 302 aa17.46■□□□□ 0.39
PKP4-214ENST00000492496 SPTBN5Q9NRC6 3674 aaKnown RBP17.45■□□□□ 0.38
PKP4-214ENST00000492496 CLDN3O15551 220 aa17.45■□□□□ 0.38
PKP4-214ENST00000492496 CLASP2O75122 1294 aaKnown RBP17.45■□□□□ 0.38
PKP4-214ENST00000492496 GAP43P17677 238 aa17.45■□□□□ 0.38
PKP4-214ENST00000492496 CA8P35219 290 aa17.45■□□□□ 0.38
PKP4-214ENST00000492496 GTF2BQ00403 316 aa17.45■□□□□ 0.38
PKP4-214ENST00000492496 SMAD4Q13485 552 aaKnown RBP17.45■□□□□ 0.38
PKP4-214ENST00000492496 HSP90AA2PQ14568 343 aaPredicted RBP17.45■□□□□ 0.38
PKP4-214ENST00000492496 PTPN14Q15678 1187 aa17.45■□□□□ 0.38
PKP4-214ENST00000492496 AXDND1Q5T1B0 1012 aaPredicted RBP17.45■□□□□ 0.38
PKP4-214ENST00000492496 SHC4Q6S5L8 630 aa17.45■□□□□ 0.38
PKP4-214ENST00000492496 ALKAL1Q6UXT8 129 aa17.45■□□□□ 0.38
PKP4-214ENST00000492496 PDILTQ8N807 584 aa17.45■□□□□ 0.38
PKP4-214ENST00000492496 VN1R2Q8NFZ6 395 aa17.45■□□□□ 0.38
PKP4-214ENST00000492496 BICD1Q96G01 975 aa17.45■□□□□ 0.38
PKP4-214ENST00000492496 PPP1R10Q96QC0 940 aaKnown RBP17.45■□□□□ 0.38
PKP4-214ENST00000492496 LRRC27Q9C0I9 530 aa17.45■□□□□ 0.38
PKP4-214ENST00000492496 MRPL17Q9NRX2 175 aaKnown RBP17.45■□□□□ 0.38
PKP4-214ENST00000492496 ANKFY1Q9P2R3 1169 aa17.45■□□□□ 0.38
PKP4-214ENST00000492496 RCOR1Q9UKL0 485 aa17.45■□□□□ 0.38
PKP4-214ENST00000492496 ADAM28Q9UKQ2 775 aa17.45■□□□□ 0.38
PKP4-214ENST00000492496 BARX2Q9UMQ3 279 aaPredicted RBP17.45■□□□□ 0.38
PKP4-214ENST00000492496 TNFRSF10AO00220 468 aa17.44■□□□□ 0.38
PKP4-214ENST00000492496 MBTPS2O43462 519 aa17.44■□□□□ 0.38
PKP4-214ENST00000492496 LILRB3O75022 631 aa17.44■□□□□ 0.38
PKP4-214ENST00000492496 IL9P15248 144 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms