RNA–Protein interactions for RNA: ENST00000492118.2

ATF3-209, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 2,103 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-209ENST00000492118 TET1Q8NFU7 2136 aa11.71□□□□□ -0.53
ATF3-209ENST00000492118 DCDC2CA8MYV0 355 aa11.71□□□□□ -0.54
ATF3-209ENST00000492118 TOM1L1O75674 476 aa11.71□□□□□ -0.54
ATF3-209ENST00000492118 SFPQP23246 707 aaKnown RBP eCLIP11.71□□□□□ -0.54
ATF3-209ENST00000492118 WNT7BP56706 349 aa11.71□□□□□ -0.54
ATF3-209ENST00000492118 FAAP100Q0VG06 881 aa11.71□□□□□ -0.54
ATF3-209ENST00000492118 MBTPS1Q14703 1052 aa11.71□□□□□ -0.54
ATF3-209ENST00000492118 NOLC1Q14978 699 aaKnown RBP eCLIP11.71□□□□□ -0.54
ATF3-209ENST00000492118 TRIM71Q2Q1W2 868 aaKnown RBP11.71□□□□□ -0.54
ATF3-209ENST00000492118 TWF2Q6IBS0 349 aaKnown RBP11.71□□□□□ -0.54
ATF3-209ENST00000492118 SRGAP1Q7Z6B7 1085 aa11.71□□□□□ -0.54
ATF3-209ENST00000492118 DEFB128Q7Z7B8 93 aa11.71□□□□□ -0.54
ATF3-209ENST00000492118 GPIHBP1Q8IV16 184 aa11.71□□□□□ -0.54
ATF3-209ENST00000492118 HVCN1Q96D96 273 aa11.71□□□□□ -0.54
ATF3-209ENST00000492118 CRACR2AQ9BSW2 395 aa11.71□□□□□ -0.54
ATF3-209ENST00000492118 TRIM6Q9C030 488 aaPredicted RBP11.71□□□□□ -0.54
ATF3-209ENST00000492118 TOPORSQ9NS56 1045 aaPredicted RBP11.71□□□□□ -0.54
ATF3-209ENST00000492118 ARMCX3Q9UH62 379 aaPredicted RBP11.71□□□□□ -0.54
ATF3-209ENST00000492118 PSMC2P35998 433 aaKnown RBP11.7□□□□□ -0.54
ATF3-209ENST00000492118 UBXN1Q04323 297 aa11.7□□□□□ -0.54
ATF3-209ENST00000492118 NCBP1Q09161 790 aaKnown RBP11.7□□□□□ -0.54
ATF3-209ENST00000492118 LPIN1Q14693 890 aa11.7□□□□□ -0.54
ATF3-209ENST00000492118 NECAB2Q7Z6G3 386 aa11.7□□□□□ -0.54
ATF3-209ENST00000492118 HS6ST3Q8IZP7 471 aa11.7□□□□□ -0.54
ATF3-209ENST00000492118 ANKRD20A12PQ8NF67 263 aa11.7□□□□□ -0.54
ATF3-209ENST00000492118 GOLGA5Q8TBA6 731 aa11.7□□□□□ -0.54
ATF3-209ENST00000492118 PMM1Q92871 262 aa11.7□□□□□ -0.54
ATF3-209ENST00000492118 CDT1Q9H211 546 aa11.7□□□□□ -0.54
ATF3-209ENST00000492118 HIPK3Q9H422 1215 aa11.7□□□□□ -0.54
ATF3-209ENST00000492118 PDE11AQ9HCR9 933 aa11.7□□□□□ -0.54
ATF3-209ENST00000492118 PADI3Q9ULW8 664 aa11.7□□□□□ -0.54
ATF3-209ENST00000492118 COMMD10Q9Y6G5 202 aa11.7□□□□□ -0.54
ATF3-209ENST00000492118 CNTNAP2Q9UHC6 1331 aa11.7□□□□□ -0.54
ATF3-209ENST00000492118 A0A0B4J269 797 aa11.69□□□□□ -0.54
ATF3-209ENST00000492118 FGFR1OPO95684 399 aaKnown RBP11.69□□□□□ -0.54
ATF3-209ENST00000492118 COL6A1P12109 1028 aa11.69□□□□□ -0.54
ATF3-209ENST00000492118 AKAP5P24588 427 aa11.69□□□□□ -0.54
ATF3-209ENST00000492118 KLK7P49862 253 aa11.69□□□□□ -0.54
ATF3-209ENST00000492118 COPB1P53618 953 aaKnown RBP11.69□□□□□ -0.54
ATF3-209ENST00000492118 APBA1Q02410 837 aa11.69□□□□□ -0.54
ATF3-209ENST00000492118 PTPN11Q06124 597 aaPredicted RBP11.69□□□□□ -0.54
ATF3-209ENST00000492118 PAK2Q13177 524 aa11.69□□□□□ -0.54
ATF3-209ENST00000492118 TSR1Q2NL82 804 aaKnown RBP11.69□□□□□ -0.54
ATF3-209ENST00000492118 UVSSAQ2YD98 709 aa11.69□□□□□ -0.54
ATF3-209ENST00000492118 FBXO47Q5MNV8 452 aa11.69□□□□□ -0.54
ATF3-209ENST00000492118 MPZL3Q6UWV2 235 aa11.69□□□□□ -0.54
ATF3-209ENST00000492118 FILIP1Q7Z7B0 1213 aa11.69□□□□□ -0.54
ATF3-209ENST00000492118 FAM114A1Q8IWE2 563 aa11.69□□□□□ -0.54
ATF3-209ENST00000492118 GPD1LQ8N335 351 aa11.69□□□□□ -0.54
ATF3-209ENST00000492118 PLEKHO2Q8TD55 490 aa11.69□□□□□ -0.54
ATF3-209ENST00000492118 CEP63Q96MT8 703 aa11.69□□□□□ -0.54
ATF3-209ENST00000492118 NFKBIZQ9BYH8 718 aa11.69□□□□□ -0.54
ATF3-209ENST00000492118 CXCL16Q9H2A7 254 aa11.69□□□□□ -0.54
ATF3-209ENST00000492118 NXF3Q9H4D5 531 aaKnown RBP11.69□□□□□ -0.54
ATF3-209ENST00000492118 TMEM39AQ9NV64 488 aa11.69□□□□□ -0.54
ATF3-209ENST00000492118 INTS13Q9NVM9 706 aa11.69□□□□□ -0.54
ATF3-209ENST00000492118 DMAC2Q9NW81 257 aa11.69□□□□□ -0.54
ATF3-209ENST00000492118 KLK14Q9P0G3 267 aa11.69□□□□□ -0.54
ATF3-209ENST00000492118 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.69□□□□□ -0.54
ATF3-209ENST00000492118 SCN5AQ14524 2016 aa11.69□□□□□ -0.54
ATF3-209ENST00000492118 SIP14410 1827 aa11.69□□□□□ -0.54
ATF3-209ENST00000492118 CCDC85CA6NKD9 419 aa11.69□□□□□ -0.54
ATF3-209ENST00000492118 CD4P01730 458 aa11.69□□□□□ -0.54
ATF3-209ENST00000492118 CXCL8P10145 99 aa11.69□□□□□ -0.54
ATF3-209ENST00000492118 ZNF75DP51815 510 aa11.69□□□□□ -0.54
ATF3-209ENST00000492118 CDC42EP1Q00587 391 aa11.69□□□□□ -0.54
ATF3-209ENST00000492118 MGAT3Q09327 533 aa11.69□□□□□ -0.54
ATF3-209ENST00000492118 SLFN12LQ6IEE8 588 aa11.69□□□□□ -0.54
ATF3-209ENST00000492118 CRELD2Q6UXH1 353 aaPredicted RBP11.69□□□□□ -0.54
ATF3-209ENST00000492118 ZPBP2Q6X784 338 aa11.69□□□□□ -0.54
ATF3-209ENST00000492118 LRRC8DQ7L1W4 858 aa11.69□□□□□ -0.54
ATF3-209ENST00000492118 APTXQ7Z2E3 356 aaKnown RBP11.69□□□□□ -0.54
ATF3-209ENST00000492118 CCDC97Q96F63 343 aaPredicted RBP11.69□□□□□ -0.54
ATF3-209ENST00000492118 PCMTD1Q96MG8 357 aaPredicted RBP11.69□□□□□ -0.54
ATF3-209ENST00000492118 SPOCK3Q9BQ16 436 aa11.69□□□□□ -0.54
ATF3-209ENST00000492118 RBAKQ9NYW8 714 aaPredicted RBP11.69□□□□□ -0.54
ATF3-209ENST00000492118 A0A1B0GUA9 196 aa11.68□□□□□ -0.54
ATF3-209ENST00000492118 MEIS3P2A8K0S8 358 aa11.68□□□□□ -0.54
ATF3-209ENST00000492118 ABLIM1O14639 778 aa11.68□□□□□ -0.54
ATF3-209ENST00000492118 TLR3O15455 904 aaKnown RBP11.68□□□□□ -0.54
ATF3-209ENST00000492118 MGEA5O60502 916 aa11.68□□□□□ -0.54
ATF3-209ENST00000492118 LRRN2O75325 713 aa11.68□□□□□ -0.54
ATF3-209ENST00000492118 EEF1GP26641 437 aaKnown RBP11.68□□□□□ -0.54
ATF3-209ENST00000492118 GCLMP48507 274 aa11.68□□□□□ -0.54
ATF3-209ENST00000492118 POU5F1BQ06416 359 aa11.68□□□□□ -0.54
ATF3-209ENST00000492118 GOLGA8FQ08AF8 430 aa11.68□□□□□ -0.54
ATF3-209ENST00000492118 GOLGA8DPQ0D2H9 430 aa11.68□□□□□ -0.54
ATF3-209ENST00000492118 MIIPQ5JXC2 388 aa11.68□□□□□ -0.54
ATF3-209ENST00000492118 NOTUMQ6P988 496 aa11.68□□□□□ -0.54
ATF3-209ENST00000492118 RNF217Q8TC41 542 aa11.68□□□□□ -0.54
ATF3-209ENST00000492118 CPLX3Q8WVH0 158 aa11.68□□□□□ -0.54
ATF3-209ENST00000492118 LPPQ93052 612 aa11.68□□□□□ -0.54
ATF3-209ENST00000492118 ADPGKQ9BRR6 497 aa11.68□□□□□ -0.54
ATF3-209ENST00000492118 IFIH1Q9BYX4 1025 aaKnown RBP11.68□□□□□ -0.54
ATF3-209ENST00000492118 RNF39Q9H2S5 420 aa11.68□□□□□ -0.54
ATF3-209ENST00000492118 PTPRHQ9HD43 1115 aa11.68□□□□□ -0.54
ATF3-209ENST00000492118 AGPAT5Q9NUQ2 364 aa11.68□□□□□ -0.54
ATF3-209ENST00000492118 SNTG2Q9NY99 539 aa11.68□□□□□ -0.54
ATF3-209ENST00000492118 TNFSF13BQ9Y275 285 aa11.68□□□□□ -0.54
ATF3-209ENST00000492118 TRIP11Q15643 1979 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms