RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 AUTS2Q8WXX7 1259 aa16.53■□□□□ 0.24
CDC42SE1-205ENST00000491825 MFSD14AQ96MC6 490 aa16.53■□□□□ 0.24
CDC42SE1-205ENST00000491825 REEP2Q9BRK0 252 aa16.53■□□□□ 0.24
CDC42SE1-205ENST00000491825 PANK2Q9BZ23 570 aa16.53■□□□□ 0.24
CDC42SE1-205ENST00000491825 LRRC27Q9C0I9 530 aa16.53■□□□□ 0.24
CDC42SE1-205ENST00000491825 GOLPH3LQ9H4A5 285 aa16.53■□□□□ 0.24
CDC42SE1-205ENST00000491825 INPP5FQ9Y2H2 1132 aa16.53■□□□□ 0.24
CDC42SE1-205ENST00000491825 ACTN4O43707 911 aaKnown RBP16.52■□□□□ 0.24
CDC42SE1-205ENST00000491825 SLFN14P0C7P3 912 aa16.52■□□□□ 0.24
CDC42SE1-205ENST00000491825 SRGAP2CP0DJJ0 459 aa16.52■□□□□ 0.24
CDC42SE1-205ENST00000491825 SYKP43405 635 aa16.52■□□□□ 0.24
CDC42SE1-205ENST00000491825 SLC11A1P49279 550 aa16.52■□□□□ 0.24
CDC42SE1-205ENST00000491825 AFF1P51825 1210 aaKnown RBP16.52■□□□□ 0.24
CDC42SE1-205ENST00000491825 PTENP60484 403 aa16.52■□□□□ 0.24
CDC42SE1-205ENST00000491825 NHLH1Q02575 133 aa16.52■□□□□ 0.24
CDC42SE1-205ENST00000491825 ZNF280BQ86YH2 543 aa16.52■□□□□ 0.24
CDC42SE1-205ENST00000491825 BSNDQ8WZ55 320 aa16.52■□□□□ 0.24
CDC42SE1-205ENST00000491825 KCNN1Q92952 543 aa16.52■□□□□ 0.24
CDC42SE1-205ENST00000491825 GBP4Q96PP9 640 aa16.52■□□□□ 0.24
CDC42SE1-205ENST00000491825 ADAM7Q9H2U9 754 aa16.52■□□□□ 0.24
CDC42SE1-205ENST00000491825 KCNG1Q9UIX4 513 aa16.52■□□□□ 0.24
CDC42SE1-205ENST00000491825 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.51■□□□□ 0.23
CDC42SE1-205ENST00000491825 MYMKA6NI61 221 aa16.51■□□□□ 0.23
CDC42SE1-205ENST00000491825 DDHD2O94830 711 aa16.51■□□□□ 0.23
CDC42SE1-205ENST00000491825 CXCL14O95715 111 aa16.51■□□□□ 0.23
CDC42SE1-205ENST00000491825 PLS3P13797 630 aa16.51■□□□□ 0.23
CDC42SE1-205ENST00000491825 AMPD3Q01432 767 aa16.51■□□□□ 0.23
CDC42SE1-205ENST00000491825 ITIH3Q06033 890 aa16.51■□□□□ 0.23
CDC42SE1-205ENST00000491825 SIGLEC14Q08ET2 396 aa16.51■□□□□ 0.23
CDC42SE1-205ENST00000491825 DMP1Q13316 513 aaPredicted RBP16.51■□□□□ 0.23
CDC42SE1-205ENST00000491825 GIT2Q14161 759 aa16.51■□□□□ 0.23
CDC42SE1-205ENST00000491825 DHX8Q14562 1220 aaKnown RBP16.51■□□□□ 0.23
CDC42SE1-205ENST00000491825 PTPN14Q15678 1187 aa16.51■□□□□ 0.23
CDC42SE1-205ENST00000491825 PTPN21Q16825 1174 aa16.51■□□□□ 0.23
CDC42SE1-205ENST00000491825 TPRNQ4KMQ1 711 aa16.51■□□□□ 0.23
CDC42SE1-205ENST00000491825 CEP57L1Q8IYX8 460 aa16.51■□□□□ 0.23
CDC42SE1-205ENST00000491825 SMG8Q8ND04 991 aaKnown RBP16.51■□□□□ 0.23
CDC42SE1-205ENST00000491825 SPIRE2Q8WWL2 714 aa16.51■□□□□ 0.23
CDC42SE1-205ENST00000491825 DDX12PQ92771 950 aa16.51■□□□□ 0.23
CDC42SE1-205ENST00000491825 PGBD4Q96DM1 585 aa16.51■□□□□ 0.23
CDC42SE1-205ENST00000491825 ASIC4Q96FT7 647 aa16.51■□□□□ 0.23
CDC42SE1-205ENST00000491825 IFT74Q96LB3 600 aa16.51■□□□□ 0.23
CDC42SE1-205ENST00000491825 NTPCRQ9BSD7 190 aaKnown RBP16.51■□□□□ 0.23
CDC42SE1-205ENST00000491825 C2orf40Q9H1Z8 148 aa16.51■□□□□ 0.23
CDC42SE1-205ENST00000491825 POMKQ9H5K3 350 aa16.51■□□□□ 0.23
CDC42SE1-205ENST00000491825 RSAD1Q9HA92 442 aa16.51■□□□□ 0.23
CDC42SE1-205ENST00000491825 PARVGQ9HBI0 331 aa16.51■□□□□ 0.23
CDC42SE1-205ENST00000491825 LARSQ9P2J5 1176 aaKnown RBP16.51■□□□□ 0.23
CDC42SE1-205ENST00000491825 PHLPP2Q6ZVD8 1323 aa16.5■□□□□ 0.23
CDC42SE1-205ENST00000491825 CNTNAP2Q9UHC6 1331 aa16.5■□□□□ 0.23
CDC42SE1-205ENST00000491825 FRMD3A2A2Y4 597 aa16.5■□□□□ 0.23
CDC42SE1-205ENST00000491825 INPPL1O15357 1258 aa16.5■□□□□ 0.23
CDC42SE1-205ENST00000491825 TSPAN1O60635 241 aa16.5■□□□□ 0.23
CDC42SE1-205ENST00000491825 TBCAO75347 108 aaKnown RBP16.5■□□□□ 0.23
CDC42SE1-205ENST00000491825 KRT18P05783 430 aaKnown RBP16.5■□□□□ 0.23
CDC42SE1-205ENST00000491825 MYL1P05976 194 aa16.5■□□□□ 0.23
CDC42SE1-205ENST00000491825 EPCAMP16422 314 aa16.5■□□□□ 0.23
CDC42SE1-205ENST00000491825 SCP2P22307 547 aa16.5■□□□□ 0.23
CDC42SE1-205ENST00000491825 UBE2HP62256 183 aa16.5■□□□□ 0.23
CDC42SE1-205ENST00000491825 FAM160A1Q05DH4 1040 aa16.5■□□□□ 0.23
CDC42SE1-205ENST00000491825 RAD51AP2Q09MP3 1159 aa16.5■□□□□ 0.23
CDC42SE1-205ENST00000491825 FMR1NBQ8N0W7 255 aaPredicted RBP16.5■□□□□ 0.23
CDC42SE1-205ENST00000491825 ENGASEQ8NFI3 743 aa16.5■□□□□ 0.23
CDC42SE1-205ENST00000491825 SLC22A17Q8WUG5 538 aa16.5■□□□□ 0.23
CDC42SE1-205ENST00000491825 DNAJC19Q96DA6 116 aa16.5■□□□□ 0.23
CDC42SE1-205ENST00000491825 NECTIN4Q96NY8 510 aa16.5■□□□□ 0.23
CDC42SE1-205ENST00000491825 TRIM9Q9C026 710 aa16.5■□□□□ 0.23
CDC42SE1-205ENST00000491825 GBP3Q9H0R5 595 aa16.5■□□□□ 0.23
CDC42SE1-205ENST00000491825 ARHGAP28Q9P2N2 729 aa16.5■□□□□ 0.23
CDC42SE1-205ENST00000491825 NPHP3-ACAD11A0A0J9YXS1 232 aa16.49■□□□□ 0.23
CDC42SE1-205ENST00000491825 LRRIQ4A6NIV6 560 aa16.49■□□□□ 0.23
CDC42SE1-205ENST00000491825 C2CD4DB7Z1M9 353 aa16.49■□□□□ 0.23
CDC42SE1-205ENST00000491825 SP100P23497 879 aaPredicted RBP16.49■□□□□ 0.23
CDC42SE1-205ENST00000491825 NPTX2P47972 431 aa16.49■□□□□ 0.23
CDC42SE1-205ENST00000491825 RNASELQ05823 741 aaKnown RBP16.49■□□□□ 0.23
CDC42SE1-205ENST00000491825 MBTD1Q05BQ5 628 aa16.49■□□□□ 0.23
CDC42SE1-205ENST00000491825 SNW1Q13573 536 aaKnown RBP16.49■□□□□ 0.23
CDC42SE1-205ENST00000491825 BMS1Q14692 1282 aaKnown RBP16.49■□□□□ 0.23
CDC42SE1-205ENST00000491825 AMHR2Q16671 573 aa16.49■□□□□ 0.23
CDC42SE1-205ENST00000491825 ZBTB8OSQ8IWT0 167 aa16.49■□□□□ 0.23
CDC42SE1-205ENST00000491825 PRSS33Q8NF86 280 aa16.49■□□□□ 0.23
CDC42SE1-205ENST00000491825 FEZF2Q8TBJ5 459 aa16.49■□□□□ 0.23
CDC42SE1-205ENST00000491825 URGCPQ8TCY9 931 aa16.49■□□□□ 0.23
CDC42SE1-205ENST00000491825 PBXIP1Q96AQ6 731 aa16.49■□□□□ 0.23
CDC42SE1-205ENST00000491825 PRIMPOLQ96LW4 560 aa16.49■□□□□ 0.23
CDC42SE1-205ENST00000491825 C7orf25Q9BPX7 421 aa16.49■□□□□ 0.23
CDC42SE1-205ENST00000491825 TMEM175Q9BSA9 504 aa16.49■□□□□ 0.23
CDC42SE1-205ENST00000491825 CCDC113Q9H0I3 377 aa16.49■□□□□ 0.23
CDC42SE1-205ENST00000491825 DZANK1Q9NVP4 752 aa16.49■□□□□ 0.23
CDC42SE1-205ENST00000491825 SEL1LQ9UBV2 794 aa16.49■□□□□ 0.23
CDC42SE1-205ENST00000491825 SERTAD1Q9UHV2 236 aa16.49■□□□□ 0.23
CDC42SE1-205ENST00000491825 LILRB3O75022 631 aa16.48■□□□□ 0.23
CDC42SE1-205ENST00000491825 FAM13AO94988 1023 aa16.48■□□□□ 0.23
CDC42SE1-205ENST00000491825 ZNF202O95125 648 aa16.48■□□□□ 0.23
CDC42SE1-205ENST00000491825 EFEMP2O95967 443 aa16.48■□□□□ 0.23
CDC42SE1-205ENST00000491825 WEE2P0C1S8 567 aa16.48■□□□□ 0.23
CDC42SE1-205ENST00000491825 GAP43P17677 238 aa16.48■□□□□ 0.23
CDC42SE1-205ENST00000491825 CA8P35219 290 aa16.48■□□□□ 0.23
CDC42SE1-205ENST00000491825 EFNA5P52803 228 aa16.48■□□□□ 0.23
CDC42SE1-205ENST00000491825 NCKAP1LP55160 1127 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms