RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 C19orf54Q5BKX5 351 aa5.86□□□□□ -1.47
PHC3-213ENST00000491258 FAM98AQ8NCA5 519 aaKnown RBP5.86□□□□□ -1.47
PHC3-213ENST00000491258 OR14C36Q8NHC7 312 aa5.86□□□□□ -1.47
PHC3-213ENST00000491258 SLC9A6Q92581 669 aa5.86□□□□□ -1.47
PHC3-213ENST00000491258 NEU1Q99519 415 aa5.86□□□□□ -1.47
PHC3-213ENST00000491258 DUSP26Q9BV47 211 aa5.86□□□□□ -1.47
PHC3-213ENST00000491258 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.86□□□□□ -1.47
PHC3-213ENST00000491258 SPTLC3Q9NUV7 552 aa5.86□□□□□ -1.47
PHC3-213ENST00000491258 TMEM260Q9NX78 707 aa5.86□□□□□ -1.47
PHC3-213ENST00000491258 TMPRSS11EQ9UL52 423 aa5.86□□□□□ -1.47
PHC3-213ENST00000491258 ATP11BQ9Y2G3 1177 aa5.86□□□□□ -1.47
PHC3-213ENST00000491258 RAB11FIP3O75154 756 aa5.85□□□□□ -1.47
PHC3-213ENST00000491258 ERBB2P04626 1255 aa5.85□□□□□ -1.47
PHC3-213ENST00000491258 OCRLQ01968 901 aa5.85□□□□□ -1.47
PHC3-213ENST00000491258 TERF2Q15554 542 aa5.85□□□□□ -1.47
PHC3-213ENST00000491258 SPDYE7PQ495Y7 208 aa5.85□□□□□ -1.47
PHC3-213ENST00000491258 MFSD14BQ5SR56 506 aa5.85□□□□□ -1.47
PHC3-213ENST00000491258 PRAMEF14Q5SWL7 426 aa5.85□□□□□ -1.47
PHC3-213ENST00000491258 METRNLQ641Q3 311 aa5.85□□□□□ -1.47
PHC3-213ENST00000491258 ARMC6Q6NXE6 501 aa5.85□□□□□ -1.47
PHC3-213ENST00000491258 FRMD7Q6ZUT3 714 aa5.85□□□□□ -1.47
PHC3-213ENST00000491258 LYSMD2Q8IV50 215 aa5.85□□□□□ -1.47
PHC3-213ENST00000491258 SMC1BQ8NDV3 1235 aa5.85□□□□□ -1.47
PHC3-213ENST00000491258 RSAD2Q8WXG1 361 aa5.85□□□□□ -1.47
PHC3-213ENST00000491258 PRDM12Q9H4Q4 367 aa5.85□□□□□ -1.47
PHC3-213ENST00000491258 KCNG1Q9UIX4 513 aa5.85□□□□□ -1.47
PHC3-213ENST00000491258 KDM1AO60341 852 aa5.84□□□□□ -1.47
PHC3-213ENST00000491258 CFIP05156 583 aa5.84□□□□□ -1.47
PHC3-213ENST00000491258 FDXRP22570 491 aa5.84□□□□□ -1.47
PHC3-213ENST00000491258 IL2P60568 153 aa5.84□□□□□ -1.47
PHC3-213ENST00000491258 PCBP1Q15365 356 aaKnown RBP eCLIP5.84□□□□□ -1.47
PHC3-213ENST00000491258 EPHA10Q5JZY3 1008 aa5.84□□□□□ -1.47
PHC3-213ENST00000491258 ATXN7L2Q5T6C5 722 aaPredicted RBP5.84□□□□□ -1.47
PHC3-213ENST00000491258 PAPD7Q5XG87 772 aaKnown RBP5.84□□□□□ -1.47
PHC3-213ENST00000491258 LRRTM3Q86VH5 581 aa5.84□□□□□ -1.47
PHC3-213ENST00000491258 ARHGEF25Q86VW2 580 aa5.84□□□□□ -1.47
PHC3-213ENST00000491258 OR56A1Q8NGH5 318 aa5.84□□□□□ -1.47
PHC3-213ENST00000491258 ZNF480Q8WV37 535 aa5.84□□□□□ -1.47
PHC3-213ENST00000491258 WNT8AQ9H1J5 351 aa5.84□□□□□ -1.47
PHC3-213ENST00000491258 FRMD4BQ9Y2L6 1034 aa5.84□□□□□ -1.47
PHC3-213ENST00000491258 CD2APQ9Y5K6 639 aa5.84□□□□□ -1.47
PHC3-213ENST00000491258 NOX1Q9Y5S8 564 aa5.84□□□□□ -1.47
PHC3-213ENST00000491258 MAST3O60307 1309 aa5.83□□□□□ -1.48
PHC3-213ENST00000491258 SALL3Q9BXA9 1300 aa5.83□□□□□ -1.48
PHC3-213ENST00000491258 FAM83GA6ND36 823 aa5.83□□□□□ -1.48
PHC3-213ENST00000491258 DRGXA6NNA5 263 aa5.83□□□□□ -1.48
PHC3-213ENST00000491258 GASTP01350 101 aa5.83□□□□□ -1.48
PHC3-213ENST00000491258 IGLV2-14P01704 120 aa5.83□□□□□ -1.48
PHC3-213ENST00000491258 LPLP06858 475 aa5.83□□□□□ -1.48
PHC3-213ENST00000491258 POU3F2P20265 443 aaPredicted RBP5.83□□□□□ -1.48
PHC3-213ENST00000491258 CTSSP25774 331 aa5.83□□□□□ -1.48
PHC3-213ENST00000491258 SCNN1BP51168 640 aa5.83□□□□□ -1.48
PHC3-213ENST00000491258 TCEA2Q15560 299 aa5.83□□□□□ -1.48
PHC3-213ENST00000491258 AGAP9Q5VTM2 703 aa5.83□□□□□ -1.48
PHC3-213ENST00000491258 GPR149Q86SP6 731 aa5.83□□□□□ -1.48
PHC3-213ENST00000491258 SLC41A1Q8IVJ1 513 aa5.83□□□□□ -1.48
PHC3-213ENST00000491258 MAPKAPK5Q8IW41 473 aa5.83□□□□□ -1.48
PHC3-213ENST00000491258 SYNPOQ8N3V7 929 aa5.83□□□□□ -1.48
PHC3-213ENST00000491258 SLC35B2Q8TB61 432 aa5.83□□□□□ -1.48
PHC3-213ENST00000491258 Q96MF0 132 aa5.83□□□□□ -1.48
PHC3-213ENST00000491258 ALOXE3Q9BYJ1 711 aa5.83□□□□□ -1.48
PHC3-213ENST00000491258 CDY2AQ9Y6F7 541 aa5.83□□□□□ -1.48
PHC3-213ENST00000491258 MYADML2A6NDP7 307 aa5.82□□□□□ -1.48
PHC3-213ENST00000491258 ADCY6O43306 1168 aa5.82□□□□□ -1.48
PHC3-213ENST00000491258 CRHR1P34998 444 aa5.82□□□□□ -1.48
PHC3-213ENST00000491258 PTPN7P35236 360 aa5.82□□□□□ -1.48
PHC3-213ENST00000491258 LSSP48449 732 aa5.82□□□□□ -1.48
PHC3-213ENST00000491258 FLT3LGP49771 235 aa5.82□□□□□ -1.48
PHC3-213ENST00000491258 LGALS4P56470 323 aa5.82□□□□□ -1.48
PHC3-213ENST00000491258 CLRN1P58418 232 aa5.82□□□□□ -1.48
PHC3-213ENST00000491258 RAP2BP61225 183 aa5.82□□□□□ -1.48
PHC3-213ENST00000491258 ZNF362Q5T0B9 420 aaPredicted RBP5.82□□□□□ -1.48
PHC3-213ENST00000491258 TSHZ3Q63HK5 1081 aa5.82□□□□□ -1.48
PHC3-213ENST00000491258 C11orf74Q86VG3 221 aa5.82□□□□□ -1.48
PHC3-213ENST00000491258 ZNF384Q8TF68 577 aa5.82□□□□□ -1.48
PHC3-213ENST00000491258 RNF31Q96EP0 1072 aa5.82□□□□□ -1.48
PHC3-213ENST00000491258 KCTD10Q9H3F6 313 aa5.82□□□□□ -1.48
PHC3-213ENST00000491258 ZSWIM4Q9H7M6 989 aa5.82□□□□□ -1.48
PHC3-213ENST00000491258 ALG13Q9NP73 1137 aaKnown RBP5.82□□□□□ -1.48
PHC3-213ENST00000491258 CXorf49A8MYA2 514 aaPredicted RBP5.81□□□□□ -1.48
PHC3-213ENST00000491258 SCAPQ12770 1279 aa5.81□□□□□ -1.48
PHC3-213ENST00000491258 ZNF169Q14929 603 aaPredicted RBP5.81□□□□□ -1.48
PHC3-213ENST00000491258 SEPT7Q16181 437 aaKnown RBP5.81□□□□□ -1.48
PHC3-213ENST00000491258 PITRM1Q5JRX3 1037 aa5.81□□□□□ -1.48
PHC3-213ENST00000491258 MED25Q71SY5 747 aa5.81□□□□□ -1.48
PHC3-213ENST00000491258 RHOT2Q8IXI1 618 aa5.81□□□□□ -1.48
PHC3-213ENST00000491258 TMEM132CQ8N3T6 1108 aa5.81□□□□□ -1.48
PHC3-213ENST00000491258 REPS2Q8NFH8 660 aa5.81□□□□□ -1.48
PHC3-213ENST00000491258 OR2W6PQ8NHA6 318 aa5.81□□□□□ -1.48
PHC3-213ENST00000491258 ZSWIM1Q9BR11 485 aa5.81□□□□□ -1.48
PHC3-213ENST00000491258 KLHL11Q9NVR0 708 aa5.81□□□□□ -1.48
PHC3-213ENST00000491258 NOC2LQ9Y3T9 749 aaKnown RBP5.81□□□□□ -1.48
PHC3-213ENST00000491258 PJA2O43164 708 aa5.8□□□□□ -1.48
PHC3-213ENST00000491258 FKBP9O95302 570 aa5.8□□□□□ -1.48
PHC3-213ENST00000491258 ELANEP08246 267 aa5.8□□□□□ -1.48
PHC3-213ENST00000491258 SIM1P81133 766 aaPredicted RBP5.8□□□□□ -1.48
PHC3-213ENST00000491258 CT83Q5H943 113 aa5.8□□□□□ -1.48
PHC3-213ENST00000491258 FAM47AQ5JRC9 791 aa5.8□□□□□ -1.48
PHC3-213ENST00000491258 Q6ZNX1 250 aa5.8□□□□□ -1.48
PHC3-213ENST00000491258 FKBP9P1Q75LS8 142 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms