RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 TRAF5O00463 557 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 HTATSF1O43719 755 aaKnown RBP2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 NARSO43776 548 aaKnown RBP2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 OFD1O75665 1012 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 REC8O95072 547 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 SCAF4O95104 1147 aaKnown RBP2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 BAG4O95429 457 aaKnown RBP2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 MPIG6BO95866 241 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 JUNP05412 331 aaKnown RBP2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 ZBTB48P10074 688 aaPredicted RBP2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 HSP90B1P14625 803 aaKnown RBP2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 KCNA6P17658 529 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 NCLP19338 710 aaKnown RBP2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 CD40P25942 277 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 PTGS2P35354 604 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 FNTBP49356 437 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 SCNN1GP51170 649 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 INHBCP55103 352 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 CCDC173Q0VFZ6 552 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 SERINC3Q13530 473 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 IDI1Q13907 227 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 TCEA2Q15560 299 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 KLHL40Q2TBA0 621 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 CCDC144BQ3MJ40 725 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 FNDC3BQ53EP0 1204 aaKnown RBP2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 MIIPQ5JXC2 388 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 LAIR1Q6GTX8 287 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 FSTL4Q6MZW2 842 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 LMBR1LQ6UX01 489 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 ESPNLQ6ZVH7 1005 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 MRGPRGQ86SM5 289 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 HOMER1Q86YM7 354 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 TMPRSS6Q8IU80 811 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 ITPRIPQ8IWB1 547 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 DHX37Q8IY37 1157 aaKnown RBP2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 CMTM4Q8IZR5 234 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 OR5AN1Q8NGI8 311 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 SREK1Q8WXA9 508 aaKnown RBP2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 ZNF512Q96ME7 567 aaPredicted RBP2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 CRAMP1Q96RY5 1269 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 ANO3Q9BYT9 981 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 MTG2Q9H4K7 406 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 CYP4F11Q9HBI6 524 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 TRIM39Q9HCM9 518 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 RRAGDQ9NQL2 400 aaPredicted RBP2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 POLR3BQ9NW08 1133 aaPredicted RBP2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 OXSMQ9NWU1 459 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 MSRAQ9UJ68 235 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 NOC2LQ9Y3T9 749 aaKnown RBP2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 DDX49Q9Y6V7 483 aaKnown RBP2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 PNPLA6Q8IY17 1366 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 IBTKQ9P2D0 1353 aaPredicted RBP2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 ERVK-7P63135 1459 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 SETBP1Q9Y6X0 1596 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 TET3O43151 1660 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 XDHP47989 1333 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 MAP3K4Q9Y6R4 1608 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 CHL1O00533 1208 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 ZNF500O60304 480 aaPredicted RBP2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 HMMRO75330 724 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 CDC45O75419 566 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 PRLP01236 227 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 TPM3P06753 285 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 CLEC2LP0C7M8 214 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 VSIG10L2P0DP72 767 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 SDSP20132 328 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 BMP5P22003 454 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 MSNP26038 577 aaKnown RBP2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 KIR2DL3P43628 341 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 NRG3P56975 720 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 ANAPC15P60006 121 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 ATP8B2P98198 1209 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 OCRLQ01968 901 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 HGFACQ04756 655 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 DUSP2Q05923 314 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 DPTQ07507 201 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 PABPC4Q13310 644 aaKnown RBP eCLIP2.43□□□□□ -2.024e-12■■■□□ 15.5
SNRNP40-207ENST00000491106 SMN1Q16637 294 aaKnown RBP2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 TWISTNBQ3B726 338 aaPredicted RBP2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 TIGD2Q4W5G0 525 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 TRIM61Q5EBN2 209 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 SPTY2D1Q68D10 685 aaPredicted RBP2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 KCNV1Q6PIU1 500 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 Q6ZRM9 215 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 FAM83AQ86UY5 434 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 ZSCAN30Q86W11 494 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 GAS2L3Q86XJ1 694 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 AHI1Q8N157 1196 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 LCORLQ8N3X6 602 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 ZNF276Q8N554 614 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 ANKRD44Q8N8A2 993 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 SLC25A43Q8WUT9 341 aaPredicted RBP2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 CHTF18Q8WVB6 975 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 LEO1Q8WVC0 666 aaPredicted RBP2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 GAB3Q8WWW8 586 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 ST8SIA2Q92186 375 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 CFHR4Q92496 578 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 APPBP2Q92624 585 aa2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 FOXRED1Q96CU9 486 aaPredicted RBP2.43□□□□□ -2.02
SNRNP40-207ENST00000491106 NAP1L5Q96NT1 182 aaPredicted RBP2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms