RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 SF3B1O75533 1304 aaKnown RBP eCLIP17.05■□□□□ 0.32
SCAMP3-208ENST00000490999 M0R2N6 131 aa17.05■□□□□ 0.32
SCAMP3-208ENST00000490999 KIF4AO95239 1232 aa17.05■□□□□ 0.32
SCAMP3-208ENST00000490999 ARF4P18085 180 aaPredicted RBP17.05■□□□□ 0.32
SCAMP3-208ENST00000490999 PTENP60484 403 aa17.05■□□□□ 0.32
SCAMP3-208ENST00000490999 GRIK3Q13003 919 aa17.05■□□□□ 0.32
SCAMP3-208ENST00000490999 CAPSQ13938 189 aa17.05■□□□□ 0.32
SCAMP3-208ENST00000490999 CTTNQ14247 550 aaKnown RBP17.05■□□□□ 0.32
SCAMP3-208ENST00000490999 HSP90AA2PQ14568 343 aaPredicted RBP17.05■□□□□ 0.32
SCAMP3-208ENST00000490999 LPAL2Q16609 132 aa17.05■□□□□ 0.32
SCAMP3-208ENST00000490999 XKR9Q5GH70 373 aa17.05■□□□□ 0.32
SCAMP3-208ENST00000490999 NCAPH2Q6IBW4 605 aa17.05■□□□□ 0.32
SCAMP3-208ENST00000490999 BLOC1S2Q6QNY1 142 aa17.05■□□□□ 0.32
SCAMP3-208ENST00000490999 MTSS1LQ765P7 747 aa17.05■□□□□ 0.32
SCAMP3-208ENST00000490999 CEP57Q86XR8 500 aa17.05■□□□□ 0.32
SCAMP3-208ENST00000490999 NPAS3Q8IXF0 933 aa17.05■□□□□ 0.32
SCAMP3-208ENST00000490999 SLC7A14Q8TBB6 771 aa17.05■□□□□ 0.32
SCAMP3-208ENST00000490999 TCP11Q8WWU5 503 aa17.05■□□□□ 0.32
SCAMP3-208ENST00000490999 CCDC51Q96ER9 411 aa17.05■□□□□ 0.32
SCAMP3-208ENST00000490999 CLSTN3Q9BQT9 956 aa17.05■□□□□ 0.32
SCAMP3-208ENST00000490999 PHF20Q9BVI0 1012 aa17.05■□□□□ 0.32
SCAMP3-208ENST00000490999 EPC1Q9H2F5 836 aa17.05■□□□□ 0.32
SCAMP3-208ENST00000490999 KCNMB3Q9NPA1 279 aa17.05■□□□□ 0.32
SCAMP3-208ENST00000490999 PARD6AQ9NPB6 346 aa17.05■□□□□ 0.32
SCAMP3-208ENST00000490999 SH3GLB2Q9NR46 395 aa17.05■□□□□ 0.32
SCAMP3-208ENST00000490999 PARP2Q9UGN5 583 aa17.05■□□□□ 0.32
SCAMP3-208ENST00000490999 GIT1Q9Y2X7 761 aa17.05■□□□□ 0.32
SCAMP3-208ENST00000490999 ZFP37Q9Y6Q3 630 aaPredicted RBP17.05■□□□□ 0.32
SCAMP3-208ENST00000490999 CHD6Q8TD26 2715 aa17.05■□□□□ 0.32
SCAMP3-208ENST00000490999 TADA2AO75478 443 aa17.04■□□□□ 0.32
SCAMP3-208ENST00000490999 P4HBP07237 508 aaKnown RBP17.04■□□□□ 0.32
SCAMP3-208ENST00000490999 RPS6KB1P23443 525 aa17.04■□□□□ 0.32
SCAMP3-208ENST00000490999 PDIA3P30101 505 aaKnown RBP17.04■□□□□ 0.32
SCAMP3-208ENST00000490999 CREMQ03060 361 aa17.04■□□□□ 0.32
SCAMP3-208ENST00000490999 LMNB2Q03252 620 aa17.04■□□□□ 0.32
SCAMP3-208ENST00000490999 PRKCQQ04759 706 aa17.04■□□□□ 0.32
SCAMP3-208ENST00000490999 PSMD5Q16401 504 aa17.04■□□□□ 0.32
SCAMP3-208ENST00000490999 BMP2KLQ5H9B9 411 aa17.04■□□□□ 0.32
SCAMP3-208ENST00000490999 MOXD1Q6UVY6 613 aa17.04■□□□□ 0.32
SCAMP3-208ENST00000490999 ZBTB44Q8NCP5 570 aa17.04■□□□□ 0.32
SCAMP3-208ENST00000490999 DYDC2Q96IM9 177 aa17.04■□□□□ 0.32
SCAMP3-208ENST00000490999 C22orf23Q9BZE7 217 aa17.04■□□□□ 0.32
SCAMP3-208ENST00000490999 ZSCAN32Q9NX65 697 aa17.04■□□□□ 0.32
SCAMP3-208ENST00000490999 SNX14Q9Y5W7 946 aa17.04■□□□□ 0.32
SCAMP3-208ENST00000490999 ARID2Q68CP9 1835 aa17.04■□□□□ 0.32
SCAMP3-208ENST00000490999 AXLP30530 894 aa17.03■□□□□ 0.32
SCAMP3-208ENST00000490999 FAM171A1Q5VUB5 890 aa17.03■□□□□ 0.32
SCAMP3-208ENST00000490999 TTPALQ9BTX7 342 aa17.03■□□□□ 0.32
SCAMP3-208ENST00000490999 CXCL16Q9H2A7 254 aa17.03■□□□□ 0.32
SCAMP3-208ENST00000490999 KCNJ14Q9UNX9 436 aa17.03■□□□□ 0.32
SCAMP3-208ENST00000490999 TDRD15B5MCY1 1934 aaKnown RBP17.02■□□□□ 0.32
SCAMP3-208ENST00000490999 DKC1O60832 514 aaKnown RBP eCLIP17.02■□□□□ 0.32
SCAMP3-208ENST00000490999 DTNBO60941 627 aa17.02■□□□□ 0.32
SCAMP3-208ENST00000490999 XYLBO75191 536 aa17.02■□□□□ 0.32
SCAMP3-208ENST00000490999 C1RP00736 705 aa17.02■□□□□ 0.32
SCAMP3-208ENST00000490999 HNRNPA1P09651 372 aaKnown RBP eCLIP17.02■□□□□ 0.32
SCAMP3-208ENST00000490999 ZBTB41Q5SVQ8 909 aa17.02■□□□□ 0.32
SCAMP3-208ENST00000490999 POTEDQ86YR6 584 aa17.02■□□□□ 0.32
SCAMP3-208ENST00000490999 C4orf19Q8IY42 314 aa17.02■□□□□ 0.32
SCAMP3-208ENST00000490999 EXOC8Q8IYI6 725 aa17.02■□□□□ 0.32
SCAMP3-208ENST00000490999 TRIM22Q8IYM9 498 aa17.02■□□□□ 0.32
SCAMP3-208ENST00000490999 HACE1Q8IYU2 909 aa17.02■□□□□ 0.32
SCAMP3-208ENST00000490999 DAGLBQ8NCG7 672 aa17.02■□□□□ 0.32
SCAMP3-208ENST00000490999 LNX1Q8TBB1 728 aaPredicted RBP17.02■□□□□ 0.32
SCAMP3-208ENST00000490999 PIK3R5Q8WYR1 880 aa17.02■□□□□ 0.32
SCAMP3-208ENST00000490999 HAS1Q92839 578 aa17.02■□□□□ 0.32
SCAMP3-208ENST00000490999 SECISBP2LQ93073 1101 aaKnown RBP17.02■□□□□ 0.32
SCAMP3-208ENST00000490999 LARP6Q9BRS8 491 aaKnown RBP17.02■□□□□ 0.32
SCAMP3-208ENST00000490999 PRMT8Q9NR22 394 aaPredicted RBP17.02■□□□□ 0.32
SCAMP3-208ENST00000490999 HEBP1Q9NRV9 189 aa17.02■□□□□ 0.32
SCAMP3-208ENST00000490999 PPME1Q9Y570 386 aa17.02■□□□□ 0.32
SCAMP3-208ENST00000490999 DOCK6Q96HP0 2047 aa17.02■□□□□ 0.32
SCAMP3-208ENST00000490999 ASAP2O43150 1006 aa17.01■□□□□ 0.31
SCAMP3-208ENST00000490999 LILRB5O75023 590 aa17.01■□□□□ 0.31
SCAMP3-208ENST00000490999 CDC45O75419 566 aa17.01■□□□□ 0.31
SCAMP3-208ENST00000490999 TGM1P22735 817 aa17.01■□□□□ 0.31
SCAMP3-208ENST00000490999 PFKPQ01813 784 aa17.01■□□□□ 0.31
SCAMP3-208ENST00000490999 SSRP1Q08945 709 aaKnown RBP17.01■□□□□ 0.31
SCAMP3-208ENST00000490999 NCBP1Q09161 790 aaKnown RBP17.01■□□□□ 0.31
SCAMP3-208ENST00000490999 MTAPQ13126 283 aa17.01■□□□□ 0.31
SCAMP3-208ENST00000490999 TFDP1Q14186 410 aa17.01■□□□□ 0.31
SCAMP3-208ENST00000490999 ST3GAL2Q16842 350 aa17.01■□□□□ 0.31
SCAMP3-208ENST00000490999 SLC5A9Q2M3M2 681 aa17.01■□□□□ 0.31
SCAMP3-208ENST00000490999 PABPC1LQ4VXU2 614 aaKnown RBP17.01■□□□□ 0.31
SCAMP3-208ENST00000490999 SLC27A1Q6PCB7 646 aa17.01■□□□□ 0.31
SCAMP3-208ENST00000490999 KRT25Q7Z3Z0 450 aa17.01■□□□□ 0.31
SCAMP3-208ENST00000490999 GPR65Q8IYL9 337 aa17.01■□□□□ 0.31
SCAMP3-208ENST00000490999 AGXT2Q9BYV1 514 aa17.01■□□□□ 0.31
SCAMP3-208ENST00000490999 OSBPL6Q9BZF3 934 aa17.01■□□□□ 0.31
SCAMP3-208ENST00000490999 PLA2G2FQ9BZM2 168 aa17.01■□□□□ 0.31
SCAMP3-208ENST00000490999 DNMT3BQ9UBC3 853 aaKnown RBP17.01■□□□□ 0.31
SCAMP3-208ENST00000490999 SHISA7A6NL88 538 aa17■□□□□ 0.31
SCAMP3-208ENST00000490999 PTGESO14684 152 aa17■□□□□ 0.31
SCAMP3-208ENST00000490999 CCNT1O60563 726 aaKnown RBP17■□□□□ 0.31
SCAMP3-208ENST00000490999 GLRA2P23416 452 aa17■□□□□ 0.31
SCAMP3-208ENST00000490999 IGFBP6P24592 240 aaPredicted RBP17■□□□□ 0.31
SCAMP3-208ENST00000490999 SPIRE1Q08AE8 756 aa17■□□□□ 0.31
SCAMP3-208ENST00000490999 TUSC3Q13454 348 aa17■□□□□ 0.31
SCAMP3-208ENST00000490999 MXD4Q14582 209 aaPredicted RBP17■□□□□ 0.31
SCAMP3-208ENST00000490999 EPHA7Q15375 998 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms