RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 DPP7Q9UHL4 492 aa23.15■■□□□ 1.3
SYNE4-205ENST00000490730 CASTOR2A6NHX0 329 aa23.14■■□□□ 1.29
SYNE4-205ENST00000490730 EFEMP2O95967 443 aa23.14■■□□□ 1.29
SYNE4-205ENST00000490730 MUTP22033 750 aa23.14■■□□□ 1.29
SYNE4-205ENST00000490730 MRE11P49959 708 aa23.14■■□□□ 1.29
SYNE4-205ENST00000490730 PTGDRQ13258 359 aa23.14■■□□□ 1.29
SYNE4-205ENST00000490730 HSP90AA2PQ14568 343 aaPredicted RBP23.14■■□□□ 1.29
SYNE4-205ENST00000490730 C15orf39Q6ZRI6 1047 aa23.14■■□□□ 1.29
SYNE4-205ENST00000490730 C4orf32Q8N8J7 132 aa23.14■■□□□ 1.29
SYNE4-205ENST00000490730 HASPINQ8TF76 798 aa23.14■■□□□ 1.29
SYNE4-205ENST00000490730 RAB34Q9BZG1 259 aa23.14■■□□□ 1.29
SYNE4-205ENST00000490730 CCDC113Q9H0I3 377 aa23.14■■□□□ 1.29
SYNE4-205ENST00000490730 RXFP1Q9HBX9 757 aa23.14■■□□□ 1.29
SYNE4-205ENST00000490730 CHST7Q9NS84 486 aa23.14■■□□□ 1.29
SYNE4-205ENST00000490730 DDX19AQ9NUU7 478 aaKnown RBP23.14■■□□□ 1.29
SYNE4-205ENST00000490730 PCDHB6Q9Y5E3 794 aa23.14■■□□□ 1.29
SYNE4-205ENST00000490730 CCDC195A0A1B0GUA6 201 aa23.13■■□□□ 1.29
SYNE4-205ENST00000490730 ACKR2O00590 384 aa23.13■■□□□ 1.29
SYNE4-205ENST00000490730 RECQL4O94761 1208 aa23.13■■□□□ 1.29
SYNE4-205ENST00000490730 PTPN5P54829 565 aa23.13■■□□□ 1.29
SYNE4-205ENST00000490730 TUSC3Q13454 348 aa23.13■■□□□ 1.29
SYNE4-205ENST00000490730 PRRX2Q99811 253 aa23.13■■□□□ 1.29
SYNE4-205ENST00000490730 PAAF1Q9BRP4 392 aa23.13■■□□□ 1.29
SYNE4-205ENST00000490730 GDAQ9Y2T3 454 aa23.13■■□□□ 1.29
SYNE4-205ENST00000490730 SF3B1O75533 1304 aaKnown RBP eCLIP23.12■■□□□ 1.29
SYNE4-205ENST00000490730 RFPL2O75678 378 aa23.12■■□□□ 1.29
SYNE4-205ENST00000490730 EDN1P05305 212 aa23.12■■□□□ 1.29
SYNE4-205ENST00000490730 RPL17P18621 184 aaKnown RBP23.12■■□□□ 1.29
SYNE4-205ENST00000490730 U2AF2P26368 475 aaKnown RBP eCLIP23.12■■□□□ 1.29
SYNE4-205ENST00000490730 AVPR2P30518 371 aa23.12■■□□□ 1.29
SYNE4-205ENST00000490730 TOB1P50616 345 aaPredicted RBP23.12■■□□□ 1.29
SYNE4-205ENST00000490730 EEF1DP3Q658K8 133 aa23.12■■□□□ 1.29
SYNE4-205ENST00000490730 MCTP1Q6DN14 999 aa23.12■■□□□ 1.29
SYNE4-205ENST00000490730 KIFAP3Q92845 792 aa23.12■■□□□ 1.29
SYNE4-205ENST00000490730 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.12■■□□□ 1.29
SYNE4-205ENST00000490730 PP2D1A8MPX8 630 aa23.11■■□□□ 1.29
SYNE4-205ENST00000490730 PTGESO14684 152 aa23.11■■□□□ 1.29
SYNE4-205ENST00000490730 KIF4AO95239 1232 aa23.11■■□□□ 1.29
SYNE4-205ENST00000490730 THP07101 528 aa23.11■■□□□ 1.29
SYNE4-205ENST00000490730 EFNA5P52803 228 aa23.11■■□□□ 1.29
SYNE4-205ENST00000490730 PDIA5Q14554 519 aa23.11■■□□□ 1.29
SYNE4-205ENST00000490730 PRSS55Q6UWB4 352 aaPredicted RBP23.11■■□□□ 1.29
SYNE4-205ENST00000490730 CMASQ8NFW8 434 aaPredicted RBP23.11■■□□□ 1.29
SYNE4-205ENST00000490730 SMG7Q92540 1137 aaKnown RBP23.11■■□□□ 1.29
SYNE4-205ENST00000490730 CXCL16Q9H2A7 254 aa23.11■■□□□ 1.29
SYNE4-205ENST00000490730 PIDD1Q9HB75 910 aa23.11■■□□□ 1.29
SYNE4-205ENST00000490730 STK24Q9Y6E0 443 aa23.11■■□□□ 1.29
SYNE4-205ENST00000490730 CCDC169A6NNP5 214 aa23.1■■□□□ 1.29
SYNE4-205ENST00000490730 E9PMD0 336 aa23.1■■□□□ 1.29
SYNE4-205ENST00000490730 TGM5O43548 720 aa23.1■■□□□ 1.29
SYNE4-205ENST00000490730 GBP2P32456 591 aaPredicted RBP23.1■■□□□ 1.29
SYNE4-205ENST00000490730 CREMQ03060 361 aa23.1■■□□□ 1.29
SYNE4-205ENST00000490730 RABEP1Q15276 862 aa23.1■■□□□ 1.29
SYNE4-205ENST00000490730 ZRSR1Q15695 479 aaKnown RBP23.1■■□□□ 1.29
SYNE4-205ENST00000490730 DCAF4L1Q3SXM0 396 aa23.1■■□□□ 1.29
SYNE4-205ENST00000490730 ATF7IP2Q5U623 682 aa23.1■■□□□ 1.29
SYNE4-205ENST00000490730 KRT79Q5XKE5 535 aa23.1■■□□□ 1.29
SYNE4-205ENST00000490730 CEP57Q86XR8 500 aa23.1■■□□□ 1.29
SYNE4-205ENST00000490730 IGSF22Q8N9C0 903 aa23.1■■□□□ 1.29
SYNE4-205ENST00000490730 MFSD1Q9H3U5 465 aa23.1■■□□□ 1.29
SYNE4-205ENST00000490730 DNM3Q9UQ16 869 aa23.1■■□□□ 1.29
SYNE4-205ENST00000490730 KIF3AQ9Y496 699 aa23.1■■□□□ 1.29
SYNE4-205ENST00000490730 ST18O60284 1047 aa23.09■■□□□ 1.29
SYNE4-205ENST00000490730 TCF15Q12870 199 aa23.09■■□□□ 1.29
SYNE4-205ENST00000490730 RTP2Q5QGT7 225 aa23.09■■□□□ 1.29
SYNE4-205ENST00000490730 NT5DC1Q5TFE4 455 aa23.09■■□□□ 1.29
SYNE4-205ENST00000490730 FAM171A1Q5VUB5 890 aa23.09■■□□□ 1.29
SYNE4-205ENST00000490730 STAMQ92783 540 aa23.09■■□□□ 1.29
SYNE4-205ENST00000490730 PHOX2BQ99453 314 aa23.09■■□□□ 1.29
SYNE4-205ENST00000490730 PLEKHA4Q9H4M7 779 aa23.09■■□□□ 1.29
SYNE4-205ENST00000490730 FNIP2Q9P278 1114 aa23.09■■□□□ 1.29
SYNE4-205ENST00000490730 MTCL1Q9Y4B5 1905 aaKnown RBP23.09■■□□□ 1.29
SYNE4-205ENST00000490730 CLUHO75153 1309 aa23.08■■□□□ 1.29
SYNE4-205ENST00000490730 K7ERI5 159 aa23.08■■□□□ 1.29
SYNE4-205ENST00000490730 CDC25AP30304 524 aa23.08■■□□□ 1.29
SYNE4-205ENST00000490730 PEX3P56589 373 aa23.08■■□□□ 1.29
SYNE4-205ENST00000490730 GLRA4Q5JXX5 417 aa23.08■■□□□ 1.29
SYNE4-205ENST00000490730 DTHD1Q6ZMT9 781 aa23.08■■□□□ 1.29
SYNE4-205ENST00000490730 APBB1IPQ7Z5R6 666 aaPredicted RBP23.08■■□□□ 1.29
SYNE4-205ENST00000490730 TTPALQ9BTX7 342 aa23.08■■□□□ 1.29
SYNE4-205ENST00000490730 WDR6Q9NNW5 1121 aaKnown RBP23.08■■□□□ 1.29
SYNE4-205ENST00000490730 LAD1O00515 517 aa23.07■■□□□ 1.28
SYNE4-205ENST00000490730 HIP1RO75146 1068 aa23.07■■□□□ 1.28
SYNE4-205ENST00000490730 TDGQ13569 410 aa23.07■■□□□ 1.28
SYNE4-205ENST00000490730 PSMD5Q16401 504 aa23.07■■□□□ 1.28
SYNE4-205ENST00000490730 IL17AQ16552 155 aa23.07■■□□□ 1.28
SYNE4-205ENST00000490730 CYP26C1Q6V0L0 522 aa23.07■■□□□ 1.28
SYNE4-205ENST00000490730 GPR65Q8IYL9 337 aa23.07■■□□□ 1.28
SYNE4-205ENST00000490730 HDAC7Q8WUI4 952 aa23.07■■□□□ 1.28
SYNE4-205ENST00000490730 ZNF707Q96C28 371 aaPredicted RBP23.07■■□□□ 1.28
SYNE4-205ENST00000490730 KCNK12Q9HB15 430 aa23.07■■□□□ 1.28
SYNE4-205ENST00000490730 N4BP1O75113 896 aaKnown RBP23.06■■□□□ 1.28
SYNE4-205ENST00000490730 NPTX2P47972 431 aa23.06■■□□□ 1.28
SYNE4-205ENST00000490730 DMP1Q13316 513 aaPredicted RBP23.06■■□□□ 1.28
SYNE4-205ENST00000490730 RUSC1Q9BVN2 902 aa23.06■■□□□ 1.28
SYNE4-205ENST00000490730 NT5C3AQ9H0P0 336 aa23.06■■□□□ 1.28
SYNE4-205ENST00000490730 FAM86C1Q9NVL1 165 aa23.06■■□□□ 1.28
SYNE4-205ENST00000490730 PHLPP2Q6ZVD8 1323 aa23.06■■□□□ 1.28
SYNE4-205ENST00000490730 TRIP11Q15643 1979 aa23.05■■□□□ 1.28
SYNE4-205ENST00000490730 H3BQV1 296 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms