RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 ANO9A1A5B4 782 aa10.11□□□□□ -0.79
SUPT20H-220ENST00000490716 LINC01565O15544 149 aa10.11□□□□□ -0.79
SUPT20H-220ENST00000490716 POU2F2P09086 479 aa10.11□□□□□ -0.79
SUPT20H-220ENST00000490716 CTSAP10619 480 aa10.11□□□□□ -0.79
SUPT20H-220ENST00000490716 LRPAP1P30533 357 aa10.11□□□□□ -0.79
SUPT20H-220ENST00000490716 PEX3P56589 373 aa10.11□□□□□ -0.79
SUPT20H-220ENST00000490716 PTPN14Q15678 1187 aa10.11□□□□□ -0.79
SUPT20H-220ENST00000490716 SMRP1Q8NCR6 262 aa10.11□□□□□ -0.79
SUPT20H-220ENST00000490716 BORCS6Q96GS4 357 aa10.11□□□□□ -0.79
SUPT20H-220ENST00000490716 ZBTB45Q96K62 511 aaPredicted RBP10.11□□□□□ -0.79
SUPT20H-220ENST00000490716 MYO16Q9Y6X6 1858 aa10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 SFI1A8K8P3 1242 aa10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 HIDE1A8MVS5 230 aa10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 ANKRD63C9JTQ0 380 aa10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 ZSCAN20P17040 1043 aaPredicted RBP10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 DSG1Q02413 1049 aa10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 GRIK3Q13003 919 aa10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 ZBTB41Q5SVQ8 909 aa10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 L1TD1Q5T7N2 865 aaKnown RBP10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 ATF7IP2Q5U623 682 aa10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 MPZL3Q6UWV2 235 aa10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 CEP120Q8N960 986 aa10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 POF1BQ8WVV4 589 aa10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 FOXD4L1Q9NU39 408 aa10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 COG5Q9UP83 839 aa10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 NRP1O14786 923 aa10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 TOM1L1O75674 476 aa10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 VNN2O95498 520 aa10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 CLCN4P51793 760 aa10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 PRPF4BQ13523 1007 aaKnown RBP10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 C12orf56Q8IXR9 622 aa10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 TMEM130Q8N3G9 435 aa10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 ZSWIM2Q8NEG5 633 aa10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 PGBD4Q96DM1 585 aa10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 SLC16A4O15374 487 aa10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 TGFB1I1O43294 461 aa10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 FGFR3P22607 806 aa10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 MLH1P40692 756 aa10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 NFIL3Q16649 462 aa10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 MAPK6Q16659 721 aa10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 FAM117BQ6P1L5 589 aa10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 CDCA3Q99618 268 aaPredicted RBP10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 KANSL3Q9P2N6 904 aa10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 STK39Q9UEW8 545 aa10.1□□□□□ -0.79
SUPT20H-220ENST00000490716 TIGD5Q53EQ6 642 aa10.09□□□□□ -0.79
SUPT20H-220ENST00000490716 HAUS6Q7Z4H7 955 aa10.09□□□□□ -0.79
SUPT20H-220ENST00000490716 GPBP1Q86WP2 473 aa10.09□□□□□ -0.79
SUPT20H-220ENST00000490716 FMR1NBQ8N0W7 255 aaPredicted RBP10.09□□□□□ -0.79
SUPT20H-220ENST00000490716 KCTD10Q9H3F6 313 aa10.09□□□□□ -0.79
SUPT20H-220ENST00000490716 TLR9Q9NR96 1032 aa10.09□□□□□ -0.79
SUPT20H-220ENST00000490716 DMAC2Q9NW81 257 aa10.09□□□□□ -0.79
SUPT20H-220ENST00000490716 FNIP2Q9P278 1114 aa10.09□□□□□ -0.79
SUPT20H-220ENST00000490716 TFIP11Q9UBB9 837 aaKnown RBP10.09□□□□□ -0.79
SUPT20H-220ENST00000490716 GRXCR2A6NFK2 248 aa10.09□□□□□ -0.79
SUPT20H-220ENST00000490716 CLASP2O75122 1294 aaKnown RBP10.09□□□□□ -0.79
SUPT20H-220ENST00000490716 RECQL4O94761 1208 aa10.09□□□□□ -0.79
SUPT20H-220ENST00000490716 CTNNB1P35222 781 aa10.09□□□□□ -0.79
SUPT20H-220ENST00000490716 PBX3P40426 434 aa10.09□□□□□ -0.79
SUPT20H-220ENST00000490716 ENOX2Q16206 610 aaKnown RBP10.09□□□□□ -0.79
SUPT20H-220ENST00000490716 SYCE2Q6PIF2 218 aa10.09□□□□□ -0.79
SUPT20H-220ENST00000490716 POTEHQ6S545 545 aa10.09□□□□□ -0.79
SUPT20H-220ENST00000490716 GAS2L1Q99501 681 aaPredicted RBP10.09□□□□□ -0.79
SUPT20H-220ENST00000490716 PLEKHA5Q9HAU0 1116 aa10.09□□□□□ -0.79
SUPT20H-220ENST00000490716 PARVGQ9HBI0 331 aa10.09□□□□□ -0.79
SUPT20H-220ENST00000490716 SNTG2Q9NY99 539 aa10.09□□□□□ -0.79
SUPT20H-220ENST00000490716 DOCK6Q96HP0 2047 aa10.09□□□□□ -0.79
SUPT20H-220ENST00000490716 AKAP5P24588 427 aa10.09□□□□□ -0.79
SUPT20H-220ENST00000490716 DPYDQ12882 1025 aa10.09□□□□□ -0.79
SUPT20H-220ENST00000490716 DMP1Q13316 513 aaPredicted RBP10.09□□□□□ -0.79
SUPT20H-220ENST00000490716 KIAA0895Q8NCT3 520 aa10.09□□□□□ -0.79
SUPT20H-220ENST00000490716 ZNF396Q96N95 335 aaPredicted RBP10.09□□□□□ -0.79
SUPT20H-220ENST00000490716 GAD1Q99259 594 aa10.09□□□□□ -0.79
SUPT20H-220ENST00000490716 PLIN2Q99541 437 aa10.09□□□□□ -0.79
SUPT20H-220ENST00000490716 TARS2Q9BW92 718 aaKnown RBP10.09□□□□□ -0.79
SUPT20H-220ENST00000490716 COL25A1Q9BXS0 654 aaPredicted RBP10.09□□□□□ -0.79
SUPT20H-220ENST00000490716 SMIM28A0A1B0GU29 152 aa10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 LOC730098B7Z3J9 87 aa10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 M0QZQ0 153 aa10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 EIF3DO15371 548 aaKnown RBP eCLIP10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 TRAK2O60296 914 aa10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 CYP3A5P20815 502 aa10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 ZCWPW2Q504Y3 356 aa10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 BEST2Q8NFU1 509 aa10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 MRPL4Q9BYD3 311 aaKnown RBP10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 KMT5AQ9NQR1 393 aa10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 UBE4BO95155 1302 aa10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 LRRIQ4A6NIV6 560 aa10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 TISP43B9A030 160 aa10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 SOD2P04179 222 aa10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 SLFN14P0C7P3 912 aa10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 NMT1P30419 496 aaKnown RBP10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 ABCD1P33897 745 aa10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 PPM1AP35813 382 aa10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 TNFSF9P41273 254 aa10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 CACNB1Q02641 598 aaPredicted RBP10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 GNL2Q13823 731 aaKnown RBP10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 ZC2HC1CQ53FD0 456 aaPredicted RBP10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 TWF2Q6IBS0 349 aaKnown RBP10.08□□□□□ -0.8
SUPT20H-220ENST00000490716 RSPO2Q6UXX9 243 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms