RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 C12orf76Q8N812 135 aaPredicted RBP11.43□□□□□ -0.58
TTC28-207ENST00000490475 DEPTORQ8TB45 409 aa11.43□□□□□ -0.58
TTC28-207ENST00000490475 KIFAP3Q92845 792 aa11.43□□□□□ -0.58
TTC28-207ENST00000490475 VN1R3Q9BXE9 311 aa11.43□□□□□ -0.58
TTC28-207ENST00000490475 MFSD1Q9H3U5 465 aa11.43□□□□□ -0.58
TTC28-207ENST00000490475 FZD8Q9H461 694 aa11.43□□□□□ -0.58
TTC28-207ENST00000490475 MAN1C1Q9NR34 630 aa11.43□□□□□ -0.58
TTC28-207ENST00000490475 CHST7Q9NS84 486 aa11.43□□□□□ -0.58
TTC28-207ENST00000490475 ZDHHC7Q9NXF8 308 aa11.43□□□□□ -0.58
TTC28-207ENST00000490475 PARP2Q9UGN5 583 aa11.43□□□□□ -0.58
TTC28-207ENST00000490475 LIMD1Q9UGP4 676 aa11.43□□□□□ -0.58
TTC28-207ENST00000490475 KCNG1Q9UIX4 513 aa11.43□□□□□ -0.58
TTC28-207ENST00000490475 MTMR6Q9Y217 621 aa11.43□□□□□ -0.58
TTC28-207ENST00000490475 WDFY4Q6ZS81 3184 aa11.42□□□□□ -0.58
TTC28-207ENST00000490475 LAD1O00515 517 aa11.42□□□□□ -0.58
TTC28-207ENST00000490475 ACKR2O00590 384 aa11.42□□□□□ -0.58
TTC28-207ENST00000490475 C2CD2LO14523 706 aa11.42□□□□□ -0.58
TTC28-207ENST00000490475 TEX28O15482 410 aa11.42□□□□□ -0.58
TTC28-207ENST00000490475 B4GALT3O60512 393 aa11.42□□□□□ -0.58
TTC28-207ENST00000490475 MED24O75448 989 aa11.42□□□□□ -0.58
TTC28-207ENST00000490475 TADA2AO75478 443 aa11.42□□□□□ -0.58
TTC28-207ENST00000490475 PAPLNO95428 1278 aa11.42□□□□□ -0.58
TTC28-207ENST00000490475 NPTXRO95502 500 aa11.42□□□□□ -0.58
TTC28-207ENST00000490475 BRD1O95696 1058 aa11.42□□□□□ -0.58
TTC28-207ENST00000490475 EFEMP2O95967 443 aa11.42□□□□□ -0.58
TTC28-207ENST00000490475 THP07101 528 aa11.42□□□□□ -0.58
TTC28-207ENST00000490475 SPATA31C1P0DKV0 1188 aa11.42□□□□□ -0.58
TTC28-207ENST00000490475 CYP11B2P19099 503 aa11.42□□□□□ -0.58
TTC28-207ENST00000490475 CLCN5P51795 746 aa11.42□□□□□ -0.58
TTC28-207ENST00000490475 AFF1P51825 1210 aaKnown RBP11.42□□□□□ -0.58
TTC28-207ENST00000490475 RESTQ13127 1097 aa11.42□□□□□ -0.58
TTC28-207ENST00000490475 TUSC3Q13454 348 aa11.42□□□□□ -0.58
TTC28-207ENST00000490475 PRPF4BQ13523 1007 aaKnown RBP11.42□□□□□ -0.58
TTC28-207ENST00000490475 TDGQ13569 410 aa11.42□□□□□ -0.58
TTC28-207ENST00000490475 PDIA5Q14554 519 aa11.42□□□□□ -0.58
TTC28-207ENST00000490475 DCAF4L1Q3SXM0 396 aa11.42□□□□□ -0.58
TTC28-207ENST00000490475 FUT10Q6P4F1 479 aa11.42□□□□□ -0.58
TTC28-207ENST00000490475 RTL10Q7L3V2 364 aa11.42□□□□□ -0.58
TTC28-207ENST00000490475 BRAPQ7Z569 592 aa11.42□□□□□ -0.58
TTC28-207ENST00000490475 KCTD17Q8N5Z5 321 aa11.42□□□□□ -0.58
TTC28-207ENST00000490475 PRSS33Q8NF86 280 aa11.42□□□□□ -0.58
TTC28-207ENST00000490475 ZFP42Q96MM3 310 aa11.42□□□□□ -0.58
TTC28-207ENST00000490475 APOL6Q9BWW8 343 aa11.42□□□□□ -0.58
TTC28-207ENST00000490475 NXF3Q9H4D5 531 aaKnown RBP11.42□□□□□ -0.58
TTC28-207ENST00000490475 WDR6Q9NNW5 1121 aaKnown RBP11.42□□□□□ -0.58
TTC28-207ENST00000490475 MARCH5Q9NX47 278 aa11.42□□□□□ -0.58
TTC28-207ENST00000490475 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.42□□□□□ -0.58
TTC28-207ENST00000490475 LRWD1Q9UFC0 647 aa11.42□□□□□ -0.58
TTC28-207ENST00000490475 HES2Q9Y543 173 aa11.42□□□□□ -0.58
TTC28-207ENST00000490475 ZFP37Q9Y6Q3 630 aaPredicted RBP11.42□□□□□ -0.58
TTC28-207ENST00000490475 CCDC195A0A1B0GUA6 201 aa11.41□□□□□ -0.58
TTC28-207ENST00000490475 GALR2O43603 387 aaPredicted RBP11.41□□□□□ -0.58
TTC28-207ENST00000490475 PRKCBP05771 671 aa11.41□□□□□ -0.58
TTC28-207ENST00000490475 CDC25AP30304 524 aa11.41□□□□□ -0.58
TTC28-207ENST00000490475 FXR2P51116 673 aaKnown RBP eCLIP11.41□□□□□ -0.58
TTC28-207ENST00000490475 HSP90AA2PQ14568 343 aaPredicted RBP11.41□□□□□ -0.58
TTC28-207ENST00000490475 ECM1Q16610 540 aa11.41□□□□□ -0.58
TTC28-207ENST00000490475 FOXD4L5Q5VV16 416 aaPredicted RBP11.41□□□□□ -0.58
TTC28-207ENST00000490475 ASTLQ6HA08 431 aaPredicted RBP11.41□□□□□ -0.58
TTC28-207ENST00000490475 PADI6Q6TGC4 694 aa11.41□□□□□ -0.58
TTC28-207ENST00000490475 DTHD1Q6ZMT9 781 aa11.41□□□□□ -0.58
TTC28-207ENST00000490475 FOXD4L4Q8WXT5 416 aaPredicted RBP11.41□□□□□ -0.58
TTC28-207ENST00000490475 RTP3Q9BQQ7 232 aa11.41□□□□□ -0.58
TTC28-207ENST00000490475 RNF39Q9H2S5 420 aa11.41□□□□□ -0.58
TTC28-207ENST00000490475 PIDD1Q9HB75 910 aa11.41□□□□□ -0.58
TTC28-207ENST00000490475 DUSP12Q9UNI6 340 aa11.41□□□□□ -0.58
TTC28-207ENST00000490475 C2orf16Q68DN1 1984 aa11.41□□□□□ -0.58
TTC28-207ENST00000490475 CLUHO75153 1309 aa11.4□□□□□ -0.58
TTC28-207ENST00000490475 PP2D1A8MPX8 630 aa11.4□□□□□ -0.58
TTC28-207ENST00000490475 B4GALT5O43286 388 aa11.4□□□□□ -0.58
TTC28-207ENST00000490475 TRAPPC3O43617 180 aa11.4□□□□□ -0.58
TTC28-207ENST00000490475 HNRNPA1P09651 372 aaKnown RBP eCLIP11.4□□□□□ -0.58
TTC28-207ENST00000490475 WEE2P0C1S8 567 aa11.4□□□□□ -0.58
TTC28-207ENST00000490475 AKAP5P24588 427 aa11.4□□□□□ -0.58
TTC28-207ENST00000490475 CCT6AP40227 531 aaKnown RBP11.4□□□□□ -0.58
TTC28-207ENST00000490475 PRPHP41219 470 aa11.4□□□□□ -0.58
TTC28-207ENST00000490475 ATP2C1P98194 919 aaPredicted RBP11.4□□□□□ -0.58
TTC28-207ENST00000490475 CEBPZQ03701 1054 aaKnown RBP11.4□□□□□ -0.58
TTC28-207ENST00000490475 TCF15Q12870 199 aa11.4□□□□□ -0.58
TTC28-207ENST00000490475 SF3A1Q15459 793 aaKnown RBP11.4□□□□□ -0.58
TTC28-207ENST00000490475 IER5LQ5T953 404 aa11.4□□□□□ -0.58
TTC28-207ENST00000490475 MAEAQ7L5Y9 396 aa11.4□□□□□ -0.58
TTC28-207ENST00000490475 IGSF22Q8N9C0 903 aa11.4□□□□□ -0.58
TTC28-207ENST00000490475 GSTCDQ8NEC7 633 aa11.4□□□□□ -0.58
TTC28-207ENST00000490475 SMG7Q92540 1137 aaKnown RBP11.4□□□□□ -0.58
TTC28-207ENST00000490475 UROC1Q96N76 676 aa11.4□□□□□ -0.58
TTC28-207ENST00000490475 TTPALQ9BTX7 342 aa11.4□□□□□ -0.58
TTC28-207ENST00000490475 TIPINQ9BVW5 301 aa11.4□□□□□ -0.58
TTC28-207ENST00000490475 C17orf75Q9HAS0 396 aa11.4□□□□□ -0.58
TTC28-207ENST00000490475 KCNK12Q9HB15 430 aa11.4□□□□□ -0.58
TTC28-207ENST00000490475 TOPORSQ9NS56 1045 aaPredicted RBP11.4□□□□□ -0.58
TTC28-207ENST00000490475 MIOSQ9NXC5 875 aa11.4□□□□□ -0.58
TTC28-207ENST00000490475 EPS15L1Q9UBC2 864 aa11.4□□□□□ -0.58
TTC28-207ENST00000490475 FBXL21Q9UKT6 434 aa11.4□□□□□ -0.58
TTC28-207ENST00000490475 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.4□□□□□ -0.58
TTC28-207ENST00000490475 CLIC4Q9Y696 253 aa11.4□□□□□ -0.58
TTC28-207ENST00000490475 VWA3AA6NCI4 1184 aa11.39□□□□□ -0.59
TTC28-207ENST00000490475 K7ERI5 159 aa11.39□□□□□ -0.59
TTC28-207ENST00000490475 ASGR2P07307 311 aa11.39□□□□□ -0.59
TTC28-207ENST00000490475 HOXA9P31269 272 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms