RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 RSPH3Q86UC2 560 aa5.07□□□□□ -1.6
CD46-216ENST00000490278 DRC7Q8IY82 874 aa5.07□□□□□ -1.6
CD46-216ENST00000490278 NSUN6Q8TEA1 469 aaKnown RBP5.07□□□□□ -1.6
CD46-216ENST00000490278 DIS3LQ8TF46 1054 aaKnown RBP5.07□□□□□ -1.6
CD46-216ENST00000490278 C1GALT1C1Q96EU7 318 aa5.07□□□□□ -1.6
CD46-216ENST00000490278 IL17RAQ96F46 866 aa5.07□□□□□ -1.6
CD46-216ENST00000490278 TEPSINQ96N21 525 aa5.07□□□□□ -1.6
CD46-216ENST00000490278 AJAP1Q9UKB5 411 aaPredicted RBP5.07□□□□□ -1.6
CD46-216ENST00000490278 PCDHB1Q9Y5F3 818 aa5.07□□□□□ -1.6
CD46-216ENST00000490278 MYBBP1AQ9BQG0 1328 aaKnown RBP5.06□□□□□ -1.6
CD46-216ENST00000490278 VSTM5A8MXK1 200 aa5.06□□□□□ -1.6
CD46-216ENST00000490278 PRICKLE3O43900 615 aaPredicted RBP5.06□□□□□ -1.6
CD46-216ENST00000490278 CTNND1O60716 968 aaKnown RBP5.06□□□□□ -1.6
CD46-216ENST00000490278 GPR32O75388 356 aa5.06□□□□□ -1.6
CD46-216ENST00000490278 AMY1AP04745 511 aa5.06□□□□□ -1.6
CD46-216ENST00000490278 SP140Q13342 867 aa5.06□□□□□ -1.6
CD46-216ENST00000490278 GRM7Q14831 915 aa5.06□□□□□ -1.6
CD46-216ENST00000490278 ARHGAP29Q52LW3 1261 aa5.06□□□□□ -1.6
CD46-216ENST00000490278 FAM47AQ5JRC9 791 aa5.06□□□□□ -1.6
CD46-216ENST00000490278 THEMIS2Q5TEJ8 643 aa5.06□□□□□ -1.6
CD46-216ENST00000490278 GLB1LQ6UWU2 654 aa5.06□□□□□ -1.6
CD46-216ENST00000490278 ZGPATQ8N5A5 531 aaKnown RBP5.06□□□□□ -1.6
CD46-216ENST00000490278 CASKIN2Q8WXE0 1202 aa5.06□□□□□ -1.6
CD46-216ENST00000490278 STON2Q8WXE9 905 aa5.06□□□□□ -1.6
CD46-216ENST00000490278 RAB24Q969Q5 203 aa5.06□□□□□ -1.6
CD46-216ENST00000490278 RUNDC1Q96C34 613 aa5.06□□□□□ -1.6
CD46-216ENST00000490278 TMX3Q96JJ7 454 aa5.06□□□□□ -1.6
CD46-216ENST00000490278 CLPTM1LQ96KA5 538 aa5.06□□□□□ -1.6
CD46-216ENST00000490278 OR14A2Q96R54 314 aa5.06□□□□□ -1.6
CD46-216ENST00000490278 ACO2Q99798 780 aaKnown RBP5.06□□□□□ -1.6
CD46-216ENST00000490278 EPC1Q9H2F5 836 aa5.06□□□□□ -1.6
CD46-216ENST00000490278 LDAHQ9H6V9 325 aa5.06□□□□□ -1.6
CD46-216ENST00000490278 KMT5AQ9NQR1 393 aa5.06□□□□□ -1.6
CD46-216ENST00000490278 C1orf112Q9NSG2 853 aa5.06□□□□□ -1.6
CD46-216ENST00000490278 PLA2G3Q9NZ20 509 aa5.06□□□□□ -1.6
CD46-216ENST00000490278 MOCS1Q9NZB8 636 aa5.06□□□□□ -1.6
CD46-216ENST00000490278 ZMYM3Q14202 1370 aa5.05□□□□□ -1.6
CD46-216ENST00000490278 SLC16A6O15403 523 aa5.05□□□□□ -1.6
CD46-216ENST00000490278 HOXA3O43365 443 aaPredicted RBP5.05□□□□□ -1.6
CD46-216ENST00000490278 INHBBP09529 407 aa5.05□□□□□ -1.6
CD46-216ENST00000490278 ALOX15P16050 662 aaPredicted RBP5.05□□□□□ -1.6
CD46-216ENST00000490278 SYN1P17600 705 aa5.05□□□□□ -1.6
CD46-216ENST00000490278 DDCP20711 480 aa5.05□□□□□ -1.6
CD46-216ENST00000490278 FLT3LGP49771 235 aa5.05□□□□□ -1.6
CD46-216ENST00000490278 ATP8B2P98198 1209 aa5.05□□□□□ -1.6
CD46-216ENST00000490278 TARDBPQ13148 414 aaKnown RBP eCLIP5.05□□□□□ -1.6
CD46-216ENST00000490278 MTM1Q13496 603 aa5.05□□□□□ -1.6
CD46-216ENST00000490278 RAB39AQ14964 217 aa5.05□□□□□ -1.6
CD46-216ENST00000490278 MFSD14BQ5SR56 506 aa5.05□□□□□ -1.6
CD46-216ENST00000490278 MFSD5Q6N075 450 aa5.05□□□□□ -1.6
CD46-216ENST00000490278 TCTN3Q6NUS6 607 aa5.05□□□□□ -1.6
CD46-216ENST00000490278 NOL8Q76FK4 1167 aaKnown RBP5.05□□□□□ -1.6
CD46-216ENST00000490278 LIMS2Q7Z4I7 341 aa5.05□□□□□ -1.6
CD46-216ENST00000490278 CIR1Q86X95 450 aaPredicted RBP5.05□□□□□ -1.6
CD46-216ENST00000490278 DENND1CQ8IV53 801 aa5.05□□□□□ -1.6
CD46-216ENST00000490278 CAMKK1Q8N5S9 505 aa5.05□□□□□ -1.6
CD46-216ENST00000490278 FBXO18Q8NFZ0 1043 aa5.05□□□□□ -1.6
CD46-216ENST00000490278 RGMAQ96B86 450 aa5.05□□□□□ -1.6
CD46-216ENST00000490278 BORCS6Q96GS4 357 aa5.05□□□□□ -1.6
CD46-216ENST00000490278 TMEM176AQ96HP8 235 aa5.05□□□□□ -1.6
CD46-216ENST00000490278 MRGPRX4Q96LA9 322 aa5.05□□□□□ -1.6
CD46-216ENST00000490278 ZNF512Q96ME7 567 aaPredicted RBP5.05□□□□□ -1.6
CD46-216ENST00000490278 PRDM11Q9NQV5 511 aa5.05□□□□□ -1.6
CD46-216ENST00000490278 OBP2AQ9NY56 170 aa5.05□□□□□ -1.6
CD46-216ENST00000490278 CALCOCO1Q9P1Z2 691 aa5.05□□□□□ -1.6
CD46-216ENST00000490278 ZFR2Q9UPR6 939 aaKnown RBP5.05□□□□□ -1.6
CD46-216ENST00000490278 ATRNL1Q5VV63 1379 aa5.04□□□□□ -1.6
CD46-216ENST00000490278 H3BML4 177 aa5.04□□□□□ -1.6
CD46-216ENST00000490278 GPR42O15529 346 aa5.04□□□□□ -1.6
CD46-216ENST00000490278 TEX33O43247 280 aa5.04□□□□□ -1.6
CD46-216ENST00000490278 RAD17O75943 681 aa5.04□□□□□ -1.6
CD46-216ENST00000490278 STC2O76061 302 aa5.04□□□□□ -1.6
CD46-216ENST00000490278 FTLP02792 175 aaPredicted RBP5.04□□□□□ -1.6
CD46-216ENST00000490278 PCSK1P29120 753 aa5.04□□□□□ -1.6
CD46-216ENST00000490278 PTH1RQ03431 593 aa5.04□□□□□ -1.6
CD46-216ENST00000490278 GBX1Q14549 363 aa5.04□□□□□ -1.6
CD46-216ENST00000490278 FAM214AQ32MH5 1076 aa5.04□□□□□ -1.6
CD46-216ENST00000490278 FKBP15Q5T1M5 1219 aa5.04□□□□□ -1.6
CD46-216ENST00000490278 DGKHQ86XP1 1220 aa5.04□□□□□ -1.6
CD46-216ENST00000490278 FUKQ8N0W3 1084 aa5.04□□□□□ -1.6
CD46-216ENST00000490278 ZBTB34Q8NCN2 500 aa5.04□□□□□ -1.6
CD46-216ENST00000490278 C3orf20Q8ND61 904 aa5.04□□□□□ -1.6
CD46-216ENST00000490278 IFI44Q8TCB0 444 aa5.04□□□□□ -1.6
CD46-216ENST00000490278 CEP95Q96GE4 821 aa5.04□□□□□ -1.6
CD46-216ENST00000490278 SAMD11Q96NU1 681 aa5.04□□□□□ -1.6
CD46-216ENST00000490278 FAM193BQ96PV7 902 aaPredicted RBP5.04□□□□□ -1.6
CD46-216ENST00000490278 DMRTA2Q96SC8 542 aa5.04□□□□□ -1.6
CD46-216ENST00000490278 MPHOSPH9Q99550 1183 aa5.04□□□□□ -1.6
CD46-216ENST00000490278 PCGF6Q9BYE7 350 aa5.04□□□□□ -1.6
CD46-216ENST00000490278 MAN1C1Q9NR34 630 aa5.04□□□□□ -1.6
CD46-216ENST00000490278 RTEL1Q9NZ71 1219 aa5.04□□□□□ -1.6
CD46-216ENST00000490278 POLHQ9Y253 713 aa5.04□□□□□ -1.6
CD46-216ENST00000490278 ACTL7AQ9Y615 435 aa5.04□□□□□ -1.6
CD46-216ENST00000490278 SLC30A1Q9Y6M5 507 aa5.04□□□□□ -1.6
CD46-216ENST00000490278 B5MCH6 92 aa5.03□□□□□ -1.6
CD46-216ENST00000490278 WNT10BO00744 389 aa5.03□□□□□ -1.6
CD46-216ENST00000490278 FOXS1O43638 330 aa5.03□□□□□ -1.6
CD46-216ENST00000490278 PRC1O43663 620 aa5.03□□□□□ -1.6
CD46-216ENST00000490278 UBXN7O94888 489 aa5.03□□□□□ -1.6
CD46-216ENST00000490278 ALDH2P05091 517 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms