RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 FAM182AQ5T1J6 154 aa16.86■□□□□ 0.29
BRD9-208ENST00000489816 SEL1L2Q5TEA6 688 aa16.86■□□□□ 0.29
BRD9-208ENST00000489816 DUPD1Q68J44 220 aa16.86■□□□□ 0.29
BRD9-208ENST00000489816 MICALL2Q8IY33 904 aa16.86■□□□□ 0.29
BRD9-208ENST00000489816 C4orf19Q8IY42 314 aa16.86■□□□□ 0.29
BRD9-208ENST00000489816 FBXL13Q8NEE6 735 aa16.86■□□□□ 0.29
BRD9-208ENST00000489816 FAM212AQ96EL1 285 aa16.86■□□□□ 0.29
BRD9-208ENST00000489816 TSPYL1Q9H0U9 437 aa16.86■□□□□ 0.29
BRD9-208ENST00000489816 MLXIPLQ9NP71 852 aa16.86■□□□□ 0.29
BRD9-208ENST00000489816 FAM114A2Q9NRY5 505 aa16.86■□□□□ 0.29
BRD9-208ENST00000489816 HACL1Q9UJ83 578 aa16.86■□□□□ 0.29
BRD9-208ENST00000489816 DBR1Q9UK59 544 aaKnown RBP16.86■□□□□ 0.29
BRD9-208ENST00000489816 RGS20O76081 388 aa16.86■□□□□ 0.29
BRD9-208ENST00000489816 IFNAR2P48551 515 aa16.86■□□□□ 0.29
BRD9-208ENST00000489816 TTC31Q49AM3 519 aaPredicted RBP16.86■□□□□ 0.29
BRD9-208ENST00000489816 TADA2BQ86TJ2 420 aa16.86■□□□□ 0.29
BRD9-208ENST00000489816 OTUD6BQ8N6M0 293 aa16.86■□□□□ 0.29
BRD9-208ENST00000489816 NEK9Q8TD19 979 aa16.86■□□□□ 0.29
BRD9-208ENST00000489816 KAT2BQ92831 832 aa16.86■□□□□ 0.29
BRD9-208ENST00000489816 ACSL3O95573 720 aa16.85■□□□□ 0.29
BRD9-208ENST00000489816 PMS2P54278 862 aa16.85■□□□□ 0.29
BRD9-208ENST00000489816 PPP1R7Q15435 360 aa16.85■□□□□ 0.29
BRD9-208ENST00000489816 ZDHHC24Q6UX98 284 aa16.85■□□□□ 0.29
BRD9-208ENST00000489816 CD302Q8IX05 232 aa16.85■□□□□ 0.29
BRD9-208ENST00000489816 EPS8L3Q8TE67 593 aaKnown RBP16.85■□□□□ 0.29
BRD9-208ENST00000489816 ZNF516Q92618 1163 aa16.85■□□□□ 0.29
BRD9-208ENST00000489816 MOV10L1Q9BXT6 1211 aaKnown RBP16.85■□□□□ 0.29
BRD9-208ENST00000489816 SYNPO2Q9UMS6 1093 aa16.85■□□□□ 0.29
BRD9-208ENST00000489816 CAPN7Q9Y6W3 813 aa16.85■□□□□ 0.29
BRD9-208ENST00000489816 DNAH12Q6ZR08 3092 aa16.85■□□□□ 0.29
BRD9-208ENST00000489816 H0YHG0 523 aa16.85■□□□□ 0.29
BRD9-208ENST00000489816 ERLIN2O94905 339 aa16.85■□□□□ 0.29
BRD9-208ENST00000489816 RRM1P23921 792 aa16.85■□□□□ 0.29
BRD9-208ENST00000489816 PEX5P50542 639 aa16.85■□□□□ 0.29
BRD9-208ENST00000489816 ZNF394Q53GI3 561 aa16.85■□□□□ 0.29
BRD9-208ENST00000489816 SEPT14Q6ZU15 432 aa16.85■□□□□ 0.29
BRD9-208ENST00000489816 DHX37Q8IY37 1157 aaKnown RBP16.85■□□□□ 0.29
BRD9-208ENST00000489816 PSMD1Q99460 953 aa16.85■□□□□ 0.29
BRD9-208ENST00000489816 HERPUD2Q9BSE4 406 aa16.85■□□□□ 0.29
BRD9-208ENST00000489816 KIAA1683Q9H0B3 1180 aa16.85■□□□□ 0.29
BRD9-208ENST00000489816 AZI2Q9H6S1 392 aa16.85■□□□□ 0.29
BRD9-208ENST00000489816 ZDHHC18Q9NUE0 388 aa16.85■□□□□ 0.29
BRD9-208ENST00000489816 LRRIQ4A6NIV6 560 aa16.85■□□□□ 0.29
BRD9-208ENST00000489816 IBSPP21815 317 aaPredicted RBP16.85■□□□□ 0.29
BRD9-208ENST00000489816 MUTP22033 750 aa16.85■□□□□ 0.29
BRD9-208ENST00000489816 RUFY4Q6ZNE9 571 aa16.85■□□□□ 0.29
BRD9-208ENST00000489816 CCDC50Q8IVM0 306 aa16.85■□□□□ 0.29
BRD9-208ENST00000489816 KCTD17Q8N5Z5 321 aa16.85■□□□□ 0.29
BRD9-208ENST00000489816 SHC3Q92529 594 aa16.85■□□□□ 0.29
BRD9-208ENST00000489816 XPNPEP1Q9NQW7 623 aa16.85■□□□□ 0.29
BRD9-208ENST00000489816 KIAA0754O94854 1291 aa16.84■□□□□ 0.29
BRD9-208ENST00000489816 NCKAP1LP55160 1127 aa16.84■□□□□ 0.29
BRD9-208ENST00000489816 NLRP11P59045 1033 aaKnown RBP16.84■□□□□ 0.29
BRD9-208ENST00000489816 PPP2R2AP63151 447 aa16.84■□□□□ 0.29
BRD9-208ENST00000489816 SP2Q02086 613 aa16.84■□□□□ 0.29
BRD9-208ENST00000489816 AGBL3Q8NEM8 1001 aa16.84■□□□□ 0.29
BRD9-208ENST00000489816 MGARPQ8TDB4 240 aa16.84■□□□□ 0.29
BRD9-208ENST00000489816 CHST7Q9NS84 486 aa16.84■□□□□ 0.29
BRD9-208ENST00000489816 PLA2G6O60733 806 aa16.84■□□□□ 0.29
BRD9-208ENST00000489816 PRKCEQ02156 737 aa16.84■□□□□ 0.29
BRD9-208ENST00000489816 ZNF772Q68DY9 489 aaPredicted RBP16.84■□□□□ 0.29
BRD9-208ENST00000489816 RAPGEF5Q92565 580 aa16.84■□□□□ 0.29
BRD9-208ENST00000489816 CYFIP2Q96F07 1278 aa16.84■□□□□ 0.29
BRD9-208ENST00000489816 DDX23Q9BUQ8 820 aaKnown RBP16.84■□□□□ 0.29
BRD9-208ENST00000489816 POLR3FQ9H1D9 316 aaPredicted RBP16.84■□□□□ 0.29
BRD9-208ENST00000489816 EPB41L4BQ9H329 900 aa16.84■□□□□ 0.29
BRD9-208ENST00000489816 GRHL1Q9NZI5 618 aa16.84■□□□□ 0.29
BRD9-208ENST00000489816 PHF2O75151 1096 aa16.83■□□□□ 0.29
BRD9-208ENST00000489816 SCP2P22307 547 aa16.83■□□□□ 0.29
BRD9-208ENST00000489816 MAPK4P31152 587 aa16.83■□□□□ 0.29
BRD9-208ENST00000489816 PTGIRP43119 386 aa16.83■□□□□ 0.29
BRD9-208ENST00000489816 GMPSP49915 693 aaPredicted RBP16.83■□□□□ 0.29
BRD9-208ENST00000489816 LIG4P49917 911 aa16.83■□□□□ 0.29
BRD9-208ENST00000489816 CNTN2Q02246 1040 aa16.83■□□□□ 0.29
BRD9-208ENST00000489816 HP1BP3Q5SSJ5 553 aaPredicted RBP16.83■□□□□ 0.29
BRD9-208ENST00000489816 DENND2CQ68D51 928 aa16.83■□□□□ 0.29
BRD9-208ENST00000489816 VSIG10LQ86VR7 867 aa16.83■□□□□ 0.29
BRD9-208ENST00000489816 LPAR1Q92633 364 aa16.83■□□□□ 0.29
BRD9-208ENST00000489816 NAP1L3Q99457 506 aaPredicted RBP16.83■□□□□ 0.29
BRD9-208ENST00000489816 C11orf70Q9BRQ4 267 aa16.83■□□□□ 0.29
BRD9-208ENST00000489816 PTPRJQ12913 1337 aa16.83■□□□□ 0.29
BRD9-208ENST00000489816 HGSO14964 777 aaPredicted RBP16.83■□□□□ 0.28
BRD9-208ENST00000489816 SPRED3Q2MJR0 410 aa16.83■□□□□ 0.28
BRD9-208ENST00000489816 SLC13A5Q86YT5 568 aaPredicted RBP16.83■□□□□ 0.28
BRD9-208ENST00000489816 MAP4K3Q8IVH8 894 aa16.83■□□□□ 0.28
BRD9-208ENST00000489816 PPM1EQ8WY54 764 aa16.83■□□□□ 0.28
BRD9-208ENST00000489816 ACSF2Q96CM8 615 aaPredicted RBP16.83■□□□□ 0.28
BRD9-208ENST00000489816 CCDC114Q96M63 670 aa16.83■□□□□ 0.28
BRD9-208ENST00000489816 CAMKK2Q96RR4 588 aa16.83■□□□□ 0.28
BRD9-208ENST00000489816 FNBP1Q96RU3 617 aa16.83■□□□□ 0.28
BRD9-208ENST00000489816 ADAM33Q9BZ11 813 aa16.83■□□□□ 0.28
BRD9-208ENST00000489816 ASIC3Q9UHC3 531 aa16.83■□□□□ 0.28
BRD9-208ENST00000489816 SLC12A6Q9UHW9 1150 aa16.83■□□□□ 0.28
BRD9-208ENST00000489816 KRT76Q01546 638 aa16.83■□□□□ 0.28
BRD9-208ENST00000489816 CDR2Q01850 454 aa16.83■□□□□ 0.28
BRD9-208ENST00000489816 CYP24A1Q07973 514 aa16.83■□□□□ 0.28
BRD9-208ENST00000489816 LRRC14Q15048 493 aa16.83■□□□□ 0.28
BRD9-208ENST00000489816 TAS1R3Q7RTX0 852 aa16.83■□□□□ 0.28
BRD9-208ENST00000489816 CDR2LQ86X02 465 aaPredicted RBP16.83■□□□□ 0.28
BRD9-208ENST00000489816 TARS2Q9BW92 718 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms