RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 DAW1Q8N136 415 aa9.18□□□□□ -0.94
VTI1A-207ENST00000489357 MMGT1Q8N4V1 131 aa9.18□□□□□ -0.94
VTI1A-207ENST00000489357 ATRIPQ8WXE1 791 aa9.18□□□□□ -0.94
VTI1A-207ENST00000489357 SOCS4Q8WXH5 440 aa9.18□□□□□ -0.94
VTI1A-207ENST00000489357 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.18□□□□□ -0.94
VTI1A-207ENST00000489357 EMID1Q96A84 441 aaPredicted RBP9.18□□□□□ -0.94
VTI1A-207ENST00000489357 ZNF333Q96JL9 665 aa9.18□□□□□ -0.94
VTI1A-207ENST00000489357 TAAR1Q96RJ0 339 aa9.18□□□□□ -0.94
VTI1A-207ENST00000489357 ANKZF1Q9H8Y5 726 aa9.18□□□□□ -0.94
VTI1A-207ENST00000489357 VIPAS39Q9H9C1 493 aa9.18□□□□□ -0.94
VTI1A-207ENST00000489357 NLRC4Q9NPP4 1024 aa9.18□□□□□ -0.94
VTI1A-207ENST00000489357 WRAP73Q9P2S5 460 aaPredicted RBP9.18□□□□□ -0.94
VTI1A-207ENST00000489357 DIS3Q9Y2L1 958 aaKnown RBP9.18□□□□□ -0.94
VTI1A-207ENST00000489357 SAMM50Q9Y512 469 aa9.18□□□□□ -0.94
VTI1A-207ENST00000489357 CENPFP49454 3210 aa9.18□□□□□ -0.94
VTI1A-207ENST00000489357 MAP2K7O14733 419 aa9.17□□□□□ -0.94
VTI1A-207ENST00000489357 ADCY3O60266 1144 aa9.17□□□□□ -0.94
VTI1A-207ENST00000489357 EXOC3O60645 756 aa9.17□□□□□ -0.94
VTI1A-207ENST00000489357 DGAT1O75907 488 aa9.17□□□□□ -0.94
VTI1A-207ENST00000489357 PSAPP07602 524 aa9.17□□□□□ -0.94
VTI1A-207ENST00000489357 NR3C2P08235 984 aa9.17□□□□□ -0.94
VTI1A-207ENST00000489357 ADORA2AP29274 412 aa9.17□□□□□ -0.94
VTI1A-207ENST00000489357 GRK4P32298 578 aa9.17□□□□□ -0.94
VTI1A-207ENST00000489357 GTF2H1P32780 548 aa9.17□□□□□ -0.94
VTI1A-207ENST00000489357 SOX5P35711 763 aa9.17□□□□□ -0.94
VTI1A-207ENST00000489357 UBXN2AP68543 259 aa9.17□□□□□ -0.94
VTI1A-207ENST00000489357 GFPT1Q06210 699 aaPredicted RBP9.17□□□□□ -0.94
VTI1A-207ENST00000489357 KIAA0753Q2KHM9 967 aa9.17□□□□□ -0.94
VTI1A-207ENST00000489357 ZNF792Q3KQV3 632 aa9.17□□□□□ -0.94
VTI1A-207ENST00000489357 CFAP221Q4G0U5 840 aa9.17□□□□□ -0.94
VTI1A-207ENST00000489357 SNRNP48Q6IEG0 339 aaKnown RBP9.17□□□□□ -0.94
VTI1A-207ENST00000489357 SLC30A10Q6XR72 485 aa9.17□□□□□ -0.94
VTI1A-207ENST00000489357 HAUS6Q7Z4H7 955 aa9.17□□□□□ -0.94
VTI1A-207ENST00000489357 EIF1ADQ8N9N8 165 aaKnown RBP9.17□□□□□ -0.94
VTI1A-207ENST00000489357 XXYLT1Q8NBI6 393 aa9.17□□□□□ -0.94
VTI1A-207ENST00000489357 IL31RAQ8NI17 732 aa9.17□□□□□ -0.94
VTI1A-207ENST00000489357 NPLOC4Q8TAT6 608 aa9.17□□□□□ -0.94
VTI1A-207ENST00000489357 SH3TC2Q8TF17 1288 aa9.17□□□□□ -0.94
VTI1A-207ENST00000489357 FGD4Q96M96 766 aa9.17□□□□□ -0.94
VTI1A-207ENST00000489357 OSBPL9Q96SU4 736 aa9.17□□□□□ -0.94
VTI1A-207ENST00000489357 MPHOSPH6Q99547 160 aaKnown RBP9.17□□□□□ -0.94
VTI1A-207ENST00000489357 UBXN6Q9BZV1 441 aa9.17□□□□□ -0.94
VTI1A-207ENST00000489357 KIAA1586Q9HCI6 787 aa9.17□□□□□ -0.94
VTI1A-207ENST00000489357 SIX2Q9NPC8 291 aa9.17□□□□□ -0.94
VTI1A-207ENST00000489357 APEX2Q9UBZ4 518 aa9.17□□□□□ -0.94
VTI1A-207ENST00000489357 TRIM10Q9UDY6 481 aa9.17□□□□□ -0.94
VTI1A-207ENST00000489357 PUF60Q9UHX1 559 aaKnown RBP9.17□□□□□ -0.94
VTI1A-207ENST00000489357 FKBPLQ9UIM3 349 aa9.17□□□□□ -0.94
VTI1A-207ENST00000489357 NENFQ9UMX5 172 aa9.17□□□□□ -0.94
VTI1A-207ENST00000489357 ARID2Q68CP9 1835 aa9.17□□□□□ -0.94
VTI1A-207ENST00000489357 IGSF9BQ9UPX0 1349 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 A0A087X0T9 212 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 SPATA31C2B4DYI2 1134 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 F8VZ95 297 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 FAM228BP0C875 321 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 TAL1P17542 331 aaPredicted RBP9.16□□□□□ -0.94
VTI1A-207ENST00000489357 EIF2AK2P19525 551 aaKnown RBP9.16□□□□□ -0.94
VTI1A-207ENST00000489357 SLC9A1P19634 815 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 TNFRSF8P28908 595 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 RGS2P41220 211 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 CASP4P49662 377 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 HADHBP55084 474 aaKnown RBP9.16□□□□□ -0.94
VTI1A-207ENST00000489357 MYL7Q01449 175 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 PTK2Q05397 1052 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 TRIM32Q13049 653 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 DMP1Q13316 513 aaPredicted RBP9.16□□□□□ -0.94
VTI1A-207ENST00000489357 BAATQ14032 418 aaPredicted RBP9.16□□□□□ -0.94
VTI1A-207ENST00000489357 PLS1Q14651 629 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 TCEAL1Q15170 157 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 LONRF2Q1L5Z9 754 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 ZC2HC1CQ53FD0 456 aaPredicted RBP9.16□□□□□ -0.94
VTI1A-207ENST00000489357 BRDTQ58F21 947 aaPredicted RBP9.16□□□□□ -0.94
VTI1A-207ENST00000489357 BEND6Q5SZJ8 279 aaPredicted RBP9.16□□□□□ -0.94
VTI1A-207ENST00000489357 UTP14CQ5TAP6 766 aaKnown RBP9.16□□□□□ -0.94
VTI1A-207ENST00000489357 OLFML2BQ68BL8 750 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 MAMDC4Q6UXC1 1216 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 NSMFQ6X4W1 530 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 NCAPG2Q86XI2 1143 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 CREG2Q8IUH2 290 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 MAP4K3Q8IVH8 894 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 EXOC8Q8IYI6 725 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 FAM133AQ8N9E0 248 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 CAGE1Q8TC20 777 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 TRIB2Q92519 343 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 APBA2Q99767 749 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 CRACR2AQ9BSW2 395 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 FUT8Q9BYC5 575 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 PRKD2Q9BZL6 878 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 JPH1Q9HDC5 661 aaPredicted RBP9.16□□□□□ -0.94
VTI1A-207ENST00000489357 CYP39A1Q9NYL5 469 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 FLRT1Q9NZU1 646 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 ADAMTS1Q9UHI8 967 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 NAGPAQ9UK23 515 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 L1RE1Q9UN81 338 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 CAPN6Q9Y6Q1 641 aa9.16□□□□□ -0.94
VTI1A-207ENST00000489357 SFI1A8K8P3 1242 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 ENC1O14682 589 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 CLIC2O15247 247 aa9.15□□□□□ -0.94
VTI1A-207ENST00000489357 ZC3H11AO75152 810 aaKnown RBP eCLIP9.15□□□□□ -0.94
VTI1A-207ENST00000489357 MOCS3O95396 460 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms