RNA–Protein interactions for RNA: ENST00000489212.2

LIME1-207, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 559 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-207ENST00000489212 CDT1Q9H211 546 aa23.25■■□□□ 1.31
LIME1-207ENST00000489212 ODF2LQ9ULJ1 636 aa23.25■■□□□ 1.31
LIME1-207ENST00000489212 IRAK3Q9Y616 596 aa23.25■■□□□ 1.31
LIME1-207ENST00000489212 FSD2A1L4K1 749 aa23.24■■□□□ 1.31
LIME1-207ENST00000489212 PROZP22891 400 aa23.24■■□□□ 1.31
LIME1-207ENST00000489212 DDIT3P35638 169 aa23.24■■□□□ 1.31
LIME1-207ENST00000489212 PKP1Q13835 747 aa23.24■■□□□ 1.31
LIME1-207ENST00000489212 PTPN14Q15678 1187 aa23.24■■□□□ 1.31
LIME1-207ENST00000489212 NAB2Q15742 525 aa23.24■■□□□ 1.31
LIME1-207ENST00000489212 RNF168Q8IYW5 571 aaPredicted RBP23.24■■□□□ 1.31
LIME1-207ENST00000489212 LINC00301Q8NCQ3 95 aa23.24■■□□□ 1.31
LIME1-207ENST00000489212 RABGGTAQ92696 567 aa23.24■■□□□ 1.31
LIME1-207ENST00000489212 TFIP11Q9UBB9 837 aaKnown RBP23.24■■□□□ 1.31
LIME1-207ENST00000489212 HCFC2Q9Y5Z7 792 aa23.24■■□□□ 1.31
LIME1-207ENST00000489212 ZNF131P52739 623 aa23.23■■□□□ 1.31
LIME1-207ENST00000489212 SMTNP53814 917 aa23.23■■□□□ 1.31
LIME1-207ENST00000489212 NCKAP1LP55160 1127 aa23.23■■□□□ 1.31
LIME1-207ENST00000489212 BMS1Q14692 1282 aaKnown RBP23.23■■□□□ 1.31
LIME1-207ENST00000489212 ZNF568Q3ZCX4 644 aa23.23■■□□□ 1.31
LIME1-207ENST00000489212 ZBTB33Q86T24 672 aa23.23■■□□□ 1.31
LIME1-207ENST00000489212 KRI1Q8N9T8 703 aaKnown RBP23.23■■□□□ 1.31
LIME1-207ENST00000489212 ZBTB45Q96K62 511 aaPredicted RBP23.23■■□□□ 1.31
LIME1-207ENST00000489212 PAAF1Q9BRP4 392 aa23.23■■□□□ 1.31
LIME1-207ENST00000489212 LARSQ9P2J5 1176 aaKnown RBP23.23■■□□□ 1.31
LIME1-207ENST00000489212 KCNG1Q9UIX4 513 aa23.23■■□□□ 1.31
LIME1-207ENST00000489212 FAM50BQ9Y247 325 aa23.23■■□□□ 1.31
LIME1-207ENST00000489212 LILRB3O75022 631 aa23.22■■□□□ 1.31
LIME1-207ENST00000489212 SOD2P04179 222 aa23.22■■□□□ 1.31
LIME1-207ENST00000489212 ZSCAN22P10073 491 aaPredicted RBP23.22■■□□□ 1.31
LIME1-207ENST00000489212 TUSC3Q13454 348 aa23.22■■□□□ 1.31
LIME1-207ENST00000489212 STK38Q15208 465 aa23.22■■□□□ 1.31
LIME1-207ENST00000489212 ANKRD54Q6NXT1 300 aa23.22■■□□□ 1.31
LIME1-207ENST00000489212 SYCE2Q6PIF2 218 aa23.22■■□□□ 1.31
LIME1-207ENST00000489212 HERC2P3Q9BVR0 1158 aa23.22■■□□□ 1.31
LIME1-207ENST00000489212 STK39Q9UEW8 545 aa23.22■■□□□ 1.31
LIME1-207ENST00000489212 CCDC39Q9UFE4 941 aa23.22■■□□□ 1.31
LIME1-207ENST00000489212 A0A087X0B3 334 aa23.21■■□□□ 1.31
LIME1-207ENST00000489212 CASTOR2A6NHX0 329 aa23.21■■□□□ 1.31
LIME1-207ENST00000489212 NR1I2O75469 434 aa23.21■■□□□ 1.31
LIME1-207ENST00000489212 FAM13AO94988 1023 aa23.21■■□□□ 1.31
LIME1-207ENST00000489212 THP07101 528 aa23.21■■□□□ 1.31
LIME1-207ENST00000489212 GRM5P41594 1212 aa23.21■■□□□ 1.31
LIME1-207ENST00000489212 OSTNP61366 133 aa23.21■■□□□ 1.31
LIME1-207ENST00000489212 ZP2Q05996 745 aa23.21■■□□□ 1.31
LIME1-207ENST00000489212 STRN3Q13033 797 aa23.21■■□□□ 1.31
LIME1-207ENST00000489212 RRAGBQ5VZM2 374 aa23.21■■□□□ 1.31
LIME1-207ENST00000489212 MPZL3Q6UWV2 235 aa23.21■■□□□ 1.31
LIME1-207ENST00000489212 HAUS6Q7Z4H7 955 aa23.21■■□□□ 1.31
LIME1-207ENST00000489212 APBB1IPQ7Z5R6 666 aaPredicted RBP23.21■■□□□ 1.31
LIME1-207ENST00000489212 MYCT1Q8N699 235 aa23.21■■□□□ 1.31
LIME1-207ENST00000489212 KHSRPQ92945 711 aaKnown RBP eCLIP23.21■■□□□ 1.31
LIME1-207ENST00000489212 KCNN1Q92952 543 aa23.21■■□□□ 1.31
LIME1-207ENST00000489212 ZNF396Q96N95 335 aaPredicted RBP23.21■■□□□ 1.31
LIME1-207ENST00000489212 FIZ1Q96SL8 496 aa23.21■■□□□ 1.31
LIME1-207ENST00000489212 COLEC11Q9BWP8 271 aa23.21■■□□□ 1.31
LIME1-207ENST00000489212 GPR62Q9BZJ7 368 aa23.21■■□□□ 1.31
LIME1-207ENST00000489212 S1PR5Q9H228 398 aa23.21■■□□□ 1.31
LIME1-207ENST00000489212 PARVGQ9HBI0 331 aa23.21■■□□□ 1.31
LIME1-207ENST00000489212 STK17AQ9UEE5 414 aa23.21■■□□□ 1.31
LIME1-207ENST00000489212 DAXXQ9UER7 740 aaPredicted RBP23.21■■□□□ 1.31
LIME1-207ENST00000489212 USP15Q9Y4E8 981 aaPredicted RBP23.21■■□□□ 1.31
LIME1-207ENST00000489212 BRD1O95696 1058 aa23.2■■□□□ 1.3
LIME1-207ENST00000489212 F13A1P00488 732 aa23.2■■□□□ 1.3
LIME1-207ENST00000489212 KRT18P05783 430 aaKnown RBP23.2■■□□□ 1.3
LIME1-207ENST00000489212 MCF2P10911 925 aa23.2■■□□□ 1.3
LIME1-207ENST00000489212 FOXD4L6Q3SYB3 417 aaPredicted RBP23.2■■□□□ 1.3
LIME1-207ENST00000489212 GLRA4Q5JXX5 417 aa23.2■■□□□ 1.3
LIME1-207ENST00000489212 FOXD4L3Q6VB84 417 aaPredicted RBP23.2■■□□□ 1.3
LIME1-207ENST00000489212 GJD3Q8N144 294 aa23.2■■□□□ 1.3
LIME1-207ENST00000489212 TCHPQ9BT92 498 aa23.2■■□□□ 1.3
LIME1-207ENST00000489212 APOL5Q9BWW9 433 aa23.2■■□□□ 1.3
LIME1-207ENST00000489212 PANK2Q9BZ23 570 aa23.2■■□□□ 1.3
LIME1-207ENST00000489212 PRKAG3Q9UGI9 489 aa23.2■■□□□ 1.3
LIME1-207ENST00000489212 C2CD2LO14523 706 aa23.19■■□□□ 1.3
LIME1-207ENST00000489212 SPTLC2O15270 562 aa23.19■■□□□ 1.3
LIME1-207ENST00000489212 MEFVO15553 781 aaPredicted RBP23.19■■□□□ 1.3
LIME1-207ENST00000489212 TOM1L1O75674 476 aa23.19■■□□□ 1.3
LIME1-207ENST00000489212 CNPP09543 421 aaKnown RBP23.19■■□□□ 1.3
LIME1-207ENST00000489212 SRGAP2BP0DMP2 458 aa23.19■■□□□ 1.3
LIME1-207ENST00000489212 HARSP12081 509 aaKnown RBP23.19■■□□□ 1.3
LIME1-207ENST00000489212 EPCAMP16422 314 aa23.19■■□□□ 1.3
LIME1-207ENST00000489212 TXLNAP40222 546 aa23.19■■□□□ 1.3
LIME1-207ENST00000489212 HSP90AA2PQ14568 343 aaPredicted RBP23.19■■□□□ 1.3
LIME1-207ENST00000489212 KIAA0319Q5VV43 1072 aa23.19■■□□□ 1.3
LIME1-207ENST00000489212 FUT10Q6P4F1 479 aa23.19■■□□□ 1.3
LIME1-207ENST00000489212 ALKAL1Q6UXT8 129 aa23.19■■□□□ 1.3
LIME1-207ENST00000489212 ZPBP2Q6X784 338 aa23.19■■□□□ 1.3
LIME1-207ENST00000489212 ADHFE1Q8IWW8 467 aa23.19■■□□□ 1.3
LIME1-207ENST00000489212 SLC22A17Q8WUG5 538 aa23.19■■□□□ 1.3
LIME1-207ENST00000489212 SUSD6Q92537 303 aa23.19■■□□□ 1.3
LIME1-207ENST00000489212 CASP10Q92851 521 aa23.19■■□□□ 1.3
LIME1-207ENST00000489212 B3GALT6Q96L58 329 aa23.19■■□□□ 1.3
LIME1-207ENST00000489212 KLHL5Q96PQ7 755 aa23.19■■□□□ 1.3
LIME1-207ENST00000489212 PPP1R10Q96QC0 940 aaKnown RBP23.19■■□□□ 1.3
LIME1-207ENST00000489212 CCDC94Q9BW85 323 aaPredicted RBP23.19■■□□□ 1.3
LIME1-207ENST00000489212 HAPLN2Q9GZV7 340 aa23.19■■□□□ 1.3
LIME1-207ENST00000489212 ZHX3Q9H4I2 956 aa23.19■■□□□ 1.3
LIME1-207ENST00000489212 MRPL17Q9NRX2 175 aaKnown RBP23.19■■□□□ 1.3
LIME1-207ENST00000489212 ANKFY1Q9P2R3 1169 aa23.19■■□□□ 1.3
LIME1-207ENST00000489212 ADAM28Q9UKQ2 775 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms