RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 VCAM1P19320 739 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 MARK3P27448 753 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 ACOT2P49753 483 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 GMPSP49915 693 aaPredicted RBP8.2□□□□□ -1.1
BEST3-205ENST00000488961 WNT7BP56706 349 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 OSTNP61366 133 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 CNTN2Q02246 1040 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 CKAP4Q07065 602 aaKnown RBP8.2□□□□□ -1.1
BEST3-205ENST00000488961 IFFO1Q0D2I5 559 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 SETDB1Q15047 1291 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 NAB2Q15742 525 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 TKFCQ3LXA3 575 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 HYIQ5T013 277 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 EPM2AIP1Q7L775 607 aaPredicted RBP8.2□□□□□ -1.1
BEST3-205ENST00000488961 HS2ST1Q7LGA3 356 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 PNMA8AQ86V59 439 aaPredicted RBP8.2□□□□□ -1.1
BEST3-205ENST00000488961 TMEM143Q96AN5 459 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 ZBTB45Q96K62 511 aaPredicted RBP8.2□□□□□ -1.1
BEST3-205ENST00000488961 PPANQ9NQ55 473 aaKnown RBP8.2□□□□□ -1.1
BEST3-205ENST00000488961 FRMD4BQ9Y2L6 1034 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 NOC2LQ9Y3T9 749 aaKnown RBP8.2□□□□□ -1.1
BEST3-205ENST00000488961 C2CD2Q9Y426 696 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 QSER1Q2KHR3 1735 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 KRIT1O00522 736 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 HGSO14964 777 aaPredicted RBP8.2□□□□□ -1.1
BEST3-205ENST00000488961 ENTPD3O75355 529 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 CFHP08603 1231 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 ERVK-9P63128 1117 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 CCDC15Q0P6D6 951 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 MKRN3Q13064 507 aaKnown RBP8.2□□□□□ -1.1
BEST3-205ENST00000488961 MAPK7Q13164 816 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 DRP2Q13474 957 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 MTERF2Q49AM1 385 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 CFAP221Q4G0U5 840 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 ZNF394Q53GI3 561 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 ZBTB41Q5SVQ8 909 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 ARHGEF16Q5VV41 709 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 SNRNP48Q6IEG0 339 aaKnown RBP8.2□□□□□ -1.1
BEST3-205ENST00000488961 SWSAP1Q6NVH7 229 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 SEPT14Q6ZU15 432 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 EHBP1Q8NDI1 1231 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 AGAP11Q8TF27 550 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 CHURC1Q8WUH1 139 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 UBLCP1Q8WVY7 318 aaPredicted RBP8.2□□□□□ -1.1
BEST3-205ENST00000488961 JDP2Q8WYK2 163 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 SEMA4DQ92854 862 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 CYFIP2Q96F07 1278 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 FAM20AQ96MK3 541 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 CEP63Q96MT8 703 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 LRRC27Q9C0I9 530 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 DEFB129Q9H1M3 183 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 SLC5A4Q9NY91 659 aa8.2□□□□□ -1.1
BEST3-205ENST00000488961 GREB1LQ9C091 1923 aaPredicted RBP8.2□□□□□ -1.1
BEST3-205ENST00000488961 TLDC2A0PJX2 215 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 F8VZ95 297 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 O00370 1275 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 PDXKO00764 312 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 PPP1R37O75864 691 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 GJB1P08034 283 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 VIL1P09327 827 aaKnown RBP8.19□□□□□ -1.1
BEST3-205ENST00000488961 KRT5P13647 590 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 YWHABP31946 246 aaKnown RBP8.19□□□□□ -1.1
BEST3-205ENST00000488961 PSMC2P35998 433 aaKnown RBP8.19□□□□□ -1.1
BEST3-205ENST00000488961 TUBB4BP68371 445 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 MXRA7P84157 204 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 ORC1Q13415 861 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 XRCC4Q13426 336 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 QPCTQ16769 361 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 ANGEL2Q5VTE6 544 aaKnown RBP8.19□□□□□ -1.1
BEST3-205ENST00000488961 SYTL5Q8TDW5 730 aaPredicted RBP8.19□□□□□ -1.1
BEST3-205ENST00000488961 CLEC4DQ8WXI8 215 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 POMGNT1Q8WZA1 660 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 ACSF2Q96CM8 615 aaPredicted RBP8.19□□□□□ -1.1
BEST3-205ENST00000488961 PWWP2AQ96N64 755 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 RUFY1Q96T51 708 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 MXRA8Q9BRK3 442 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 RANBP17Q9H2T7 1088 aaKnown RBP8.19□□□□□ -1.1
BEST3-205ENST00000488961 CTTNBP2NLQ9P2B4 639 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 ANKFY1Q9P2R3 1169 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 GABBR1Q9UBS5 961 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 PDE4DIPQ5VU43 2346 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 FOSP01100 380 aaPredicted RBP8.19□□□□□ -1.1
BEST3-205ENST00000488961 MMEP08473 750 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 H2AFZP0C0S5 128 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 NAT1P18440 290 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 TNFAIP3P21580 790 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 EIF4BP23588 611 aaKnown RBP8.19□□□□□ -1.1
BEST3-205ENST00000488961 TMOD1P28289 359 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 HNRNPH3P31942 346 aaKnown RBP8.19□□□□□ -1.1
BEST3-205ENST00000488961 STAT1P42224 750 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 SLCO1A2P46721 670 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 POLE2P56282 527 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 NNTQ13423 1086 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 FIGNQ5HY92 759 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 HP1BP3Q5SSJ5 553 aaPredicted RBP8.19□□□□□ -1.1
BEST3-205ENST00000488961 MEI1Q5TIA1 1274 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 DCAF12L1Q5VU92 463 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 TRIM68Q6AZZ1 485 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 H2AFVQ71UI9 128 aa8.19□□□□□ -1.1
BEST3-205ENST00000488961 HAUS6Q7Z4H7 955 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms