RNA–Protein interactions for RNA: ENST00000488918.2

ARHGEF39-204, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 347 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-204ENST00000488918 CES5AQ6NT32 575 aa12.27□□□□□ -0.45
ARHGEF39-204ENST00000488918 ADGRD2Q7Z7M1 963 aa12.27□□□□□ -0.45
ARHGEF39-204ENST00000488918 MRPL43Q8N983 215 aaKnown RBP12.27□□□□□ -0.45
ARHGEF39-204ENST00000488918 IQUBQ8NA54 791 aa12.27□□□□□ -0.45
ARHGEF39-204ENST00000488918 LINC00301Q8NCQ3 95 aa12.27□□□□□ -0.45
ARHGEF39-204ENST00000488918 TARS2Q9BW92 718 aaKnown RBP12.27□□□□□ -0.45
ARHGEF39-204ENST00000488918 MRPL44Q9H9J2 332 aaKnown RBP12.27□□□□□ -0.45
ARHGEF39-204ENST00000488918 ARHGAP28Q9P2N2 729 aa12.27□□□□□ -0.45
ARHGEF39-204ENST00000488918 EXOC7Q9UPT5 735 aa12.27□□□□□ -0.45
ARHGEF39-204ENST00000488918 USP20Q9Y2K6 914 aa12.27□□□□□ -0.45
ARHGEF39-204ENST00000488918 NLRC5Q86WI3 1866 aa12.27□□□□□ -0.45
ARHGEF39-204ENST00000488918 TRAPPC3O43617 180 aa12.26□□□□□ -0.45
ARHGEF39-204ENST00000488918 CTSAP10619 480 aa12.26□□□□□ -0.45
ARHGEF39-204ENST00000488918 BMP1P13497 986 aa12.26□□□□□ -0.45
ARHGEF39-204ENST00000488918 GTF2F1P35269 517 aaKnown RBP eCLIP12.26□□□□□ -0.45
ARHGEF39-204ENST00000488918 GRM5P41594 1212 aa12.26□□□□□ -0.45
ARHGEF39-204ENST00000488918 GLUD2P49448 558 aa12.26□□□□□ -0.45
ARHGEF39-204ENST00000488918 KRT85P78386 507 aa12.26□□□□□ -0.45
ARHGEF39-204ENST00000488918 TUSC3Q13454 348 aa12.26□□□□□ -0.45
ARHGEF39-204ENST00000488918 CAMK1Q14012 370 aa12.26□□□□□ -0.45
ARHGEF39-204ENST00000488918 HSP90AA2PQ14568 343 aaPredicted RBP12.26□□□□□ -0.45
ARHGEF39-204ENST00000488918 DUSP6Q16828 381 aa12.26□□□□□ -0.45
ARHGEF39-204ENST00000488918 USP41Q3LFD5 358 aa12.26□□□□□ -0.45
ARHGEF39-204ENST00000488918 ZPBP2Q6X784 338 aa12.26□□□□□ -0.45
ARHGEF39-204ENST00000488918 CEP57Q86XR8 500 aa12.26□□□□□ -0.45
ARHGEF39-204ENST00000488918 CCDC65Q8IXS2 484 aa12.26□□□□□ -0.45
ARHGEF39-204ENST00000488918 COLGALT2Q8IYK4 626 aa12.26□□□□□ -0.45
ARHGEF39-204ENST00000488918 CEP57L1Q8IYX8 460 aa12.26□□□□□ -0.45
ARHGEF39-204ENST00000488918 SYCP3Q8IZU3 236 aa12.26□□□□□ -0.45
ARHGEF39-204ENST00000488918 TMEM161BQ8NDZ6 487 aa12.26□□□□□ -0.45
ARHGEF39-204ENST00000488918 DDX12PQ92771 950 aa12.26□□□□□ -0.45
ARHGEF39-204ENST00000488918 UROC1Q96N76 676 aa12.26□□□□□ -0.45
ARHGEF39-204ENST00000488918 CUEDC2Q9H467 287 aa12.26□□□□□ -0.45
ARHGEF39-204ENST00000488918 BLOC1S4Q9NUP1 217 aa12.26□□□□□ -0.45
ARHGEF39-204ENST00000488918 SEL1LQ9UBV2 794 aa12.26□□□□□ -0.45
ARHGEF39-204ENST00000488918 ADAM28Q9UKQ2 775 aa12.26□□□□□ -0.45
ARHGEF39-204ENST00000488918 PCDHGC5Q9Y5F6 944 aa12.26□□□□□ -0.45
ARHGEF39-204ENST00000488918 MORC2Q9Y6X9 1032 aaPredicted RBP12.26□□□□□ -0.45
ARHGEF39-204ENST00000488918 SF3B1O75533 1304 aaKnown RBP eCLIP12.26□□□□□ -0.45
ARHGEF39-204ENST00000488918 PRRC2BQ5JSZ5 2229 aaKnown RBP12.26□□□□□ -0.45
ARHGEF39-204ENST00000488918 C2orf71A6NGG8 1288 aa12.25□□□□□ -0.45
ARHGEF39-204ENST00000488918 CASTOR2A6NHX0 329 aa12.25□□□□□ -0.45
ARHGEF39-204ENST00000488918 HIDE1A8MVS5 230 aa12.25□□□□□ -0.45
ARHGEF39-204ENST00000488918 FSCN2O14926 492 aa12.25□□□□□ -0.45
ARHGEF39-204ENST00000488918 INPPL1O15357 1258 aa12.25□□□□□ -0.45
ARHGEF39-204ENST00000488918 LINC01565O15544 149 aa12.25□□□□□ -0.45
ARHGEF39-204ENST00000488918 XPOTO43592 962 aaKnown RBP12.25□□□□□ -0.45
ARHGEF39-204ENST00000488918 SOD2P04179 222 aa12.25□□□□□ -0.45
ARHGEF39-204ENST00000488918 ADH1AP07327 375 aa12.25□□□□□ -0.45
ARHGEF39-204ENST00000488918 MAPTP10636 758 aaKnown RBP12.25□□□□□ -0.45
ARHGEF39-204ENST00000488918 HOXB8P17481 243 aaPredicted RBP12.25□□□□□ -0.45
ARHGEF39-204ENST00000488918 AFF1P51825 1210 aaKnown RBP12.25□□□□□ -0.45
ARHGEF39-204ENST00000488918 MAPK7Q13164 816 aa12.25□□□□□ -0.45
ARHGEF39-204ENST00000488918 SMAD4Q13485 552 aaKnown RBP12.25□□□□□ -0.45
ARHGEF39-204ENST00000488918 ARSHQ5FYA8 562 aa12.25□□□□□ -0.45
ARHGEF39-204ENST00000488918 HERC4Q5GLZ8 1057 aaPredicted RBP12.25□□□□□ -0.45
ARHGEF39-204ENST00000488918 EEF1DP3Q658K8 133 aa12.25□□□□□ -0.45
ARHGEF39-204ENST00000488918 SLFN12LQ6IEE8 588 aa12.25□□□□□ -0.45
ARHGEF39-204ENST00000488918 PDXDC1Q6P996 788 aa12.25□□□□□ -0.45
ARHGEF39-204ENST00000488918 DAW1Q8N136 415 aa12.25□□□□□ -0.45
ARHGEF39-204ENST00000488918 DHX58Q96C10 678 aa12.25□□□□□ -0.45
ARHGEF39-204ENST00000488918 FAM212AQ96EL1 285 aa12.25□□□□□ -0.45
ARHGEF39-204ENST00000488918 CCDC34Q96HJ3 373 aa12.25□□□□□ -0.45
ARHGEF39-204ENST00000488918 SPATA32Q96LK8 384 aa12.25□□□□□ -0.45
ARHGEF39-204ENST00000488918 MSTO1Q9BUK6 570 aa12.25□□□□□ -0.45
ARHGEF39-204ENST00000488918 ZBP1Q9H171 429 aa12.25□□□□□ -0.45
ARHGEF39-204ENST00000488918 CDT1Q9H211 546 aa12.25□□□□□ -0.45
ARHGEF39-204ENST00000488918 DZANK1Q9NVP4 752 aa12.25□□□□□ -0.45
ARHGEF39-204ENST00000488918 BARX2Q9UMQ3 279 aaPredicted RBP12.25□□□□□ -0.45
ARHGEF39-204ENST00000488918 TBX20Q9UMR3 447 aa12.25□□□□□ -0.45
ARHGEF39-204ENST00000488918 PCDHB13Q9Y5F0 798 aa12.25□□□□□ -0.45
ARHGEF39-204ENST00000488918 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.25□□□□□ -0.45
ARHGEF39-204ENST00000488918 GOLGA6L4A6NEF3 574 aa12.24□□□□□ -0.45
ARHGEF39-204ENST00000488918 GRXCR2A6NFK2 248 aa12.24□□□□□ -0.45
ARHGEF39-204ENST00000488918 TTLL13PA6NNM8 815 aa12.24□□□□□ -0.45
ARHGEF39-204ENST00000488918 GCNT3O95395 438 aa12.24□□□□□ -0.45
ARHGEF39-204ENST00000488918 NCKAP1LP55160 1127 aa12.24□□□□□ -0.45
ARHGEF39-204ENST00000488918 PPP2R3AQ06190 1150 aa12.24□□□□□ -0.45
ARHGEF39-204ENST00000488918 DSC1Q08554 894 aa12.24□□□□□ -0.45
ARHGEF39-204ENST00000488918 ALCAMQ13740 583 aa12.24□□□□□ -0.45
ARHGEF39-204ENST00000488918 CTC1Q2NKJ3 1217 aa12.24□□□□□ -0.45
ARHGEF39-204ENST00000488918 FNDC1Q4ZHG4 1894 aaPredicted RBP12.24□□□□□ -0.45
ARHGEF39-204ENST00000488918 GLRA4Q5JXX5 417 aa12.24□□□□□ -0.45
ARHGEF39-204ENST00000488918 USP49Q70CQ1 688 aa12.24□□□□□ -0.45
ARHGEF39-204ENST00000488918 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.24□□□□□ -0.45
ARHGEF39-204ENST00000488918 AUTS2Q8WXX7 1259 aa12.24□□□□□ -0.45
ARHGEF39-204ENST00000488918 DDX27Q96GQ7 796 aaKnown RBP12.24□□□□□ -0.45
ARHGEF39-204ENST00000488918 RPF1Q9H9Y2 349 aaKnown RBP12.24□□□□□ -0.45
ARHGEF39-204ENST00000488918 MAGEF1Q9HAY2 307 aa12.24□□□□□ -0.45
ARHGEF39-204ENST00000488918 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.24□□□□□ -0.45
ARHGEF39-204ENST00000488918 PANK4Q9NVE7 773 aa12.24□□□□□ -0.45
ARHGEF39-204ENST00000488918 MIOSQ9NXC5 875 aa12.24□□□□□ -0.45
ARHGEF39-204ENST00000488918 PRKAG3Q9UGI9 489 aa12.24□□□□□ -0.45
ARHGEF39-204ENST00000488918 NUB1Q9Y5A7 615 aa12.24□□□□□ -0.45
ARHGEF39-204ENST00000488918 CLASP2O75122 1294 aaKnown RBP12.23□□□□□ -0.45
ARHGEF39-204ENST00000488918 TBX10O75333 385 aa12.23□□□□□ -0.45
ARHGEF39-204ENST00000488918 B3GAT3O94766 335 aa12.23□□□□□ -0.45
ARHGEF39-204ENST00000488918 CLTAP09496 248 aa12.23□□□□□ -0.45
ARHGEF39-204ENST00000488918 ZNF131P52739 623 aa12.23□□□□□ -0.45
ARHGEF39-204ENST00000488918 ASIC1P78348 528 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms