RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 CTSAP10619 480 aa17.5■□□□□ 0.39
CTDSP1-209ENST00000488627 GRM5P41594 1212 aa17.5■□□□□ 0.39
CTDSP1-209ENST00000488627 RBM10P98175 930 aaKnown RBP17.5■□□□□ 0.39
CTDSP1-209ENST00000488627 XKR4Q5GH76 650 aa17.5■□□□□ 0.39
CTDSP1-209ENST00000488627 ALKAL1Q6UXT8 129 aa17.5■□□□□ 0.39
CTDSP1-209ENST00000488627 ZPBP2Q6X784 338 aa17.5■□□□□ 0.39
CTDSP1-209ENST00000488627 CCDC73Q6ZRK6 1079 aa17.5■□□□□ 0.39
CTDSP1-209ENST00000488627 EP400NLQ6ZTU2 488 aa17.5■□□□□ 0.39
CTDSP1-209ENST00000488627 RNF168Q8IYW5 571 aaPredicted RBP17.5■□□□□ 0.39
CTDSP1-209ENST00000488627 DDX12PQ92771 950 aa17.5■□□□□ 0.39
CTDSP1-209ENST00000488627 DNAJC19Q96DA6 116 aa17.5■□□□□ 0.39
CTDSP1-209ENST00000488627 CDCA3Q99618 268 aaPredicted RBP17.5■□□□□ 0.39
CTDSP1-209ENST00000488627 HAPLN2Q9GZV7 340 aa17.5■□□□□ 0.39
CTDSP1-209ENST00000488627 RCOR1Q9UKL0 485 aa17.5■□□□□ 0.39
CTDSP1-209ENST00000488627 GDAQ9Y2T3 454 aa17.5■□□□□ 0.39
CTDSP1-209ENST00000488627 PRG3Q9Y2Y8 225 aaPredicted RBP17.5■□□□□ 0.39
CTDSP1-209ENST00000488627 IRAK3Q9Y616 596 aa17.5■□□□□ 0.39
CTDSP1-209ENST00000488627 GRXCR2A6NFK2 248 aa17.49■□□□□ 0.39
CTDSP1-209ENST00000488627 MEFVO15553 781 aaPredicted RBP17.49■□□□□ 0.39
CTDSP1-209ENST00000488627 LILRB3O75022 631 aa17.49■□□□□ 0.39
CTDSP1-209ENST00000488627 TOM1L1O75674 476 aa17.49■□□□□ 0.39
CTDSP1-209ENST00000488627 KRT18P05783 430 aaKnown RBP17.49■□□□□ 0.39
CTDSP1-209ENST00000488627 MCF2P10911 925 aa17.49■□□□□ 0.39
CTDSP1-209ENST00000488627 OR1G1P47890 313 aa17.49■□□□□ 0.39
CTDSP1-209ENST00000488627 STRN3Q13033 797 aa17.49■□□□□ 0.39
CTDSP1-209ENST00000488627 SMC1AQ14683 1233 aaKnown RBP17.49■□□□□ 0.39
CTDSP1-209ENST00000488627 E2F4Q16254 413 aa17.49■□□□□ 0.39
CTDSP1-209ENST00000488627 ZNF568Q3ZCX4 644 aa17.49■□□□□ 0.39
CTDSP1-209ENST00000488627 MPZL3Q6UWV2 235 aa17.49■□□□□ 0.39
CTDSP1-209ENST00000488627 TMEM184AQ6ZMB5 413 aa17.49■□□□□ 0.39
CTDSP1-209ENST00000488627 SV2BQ7L1I2 683 aa17.49■□□□□ 0.39
CTDSP1-209ENST00000488627 TAS1R1Q7RTX1 841 aa17.49■□□□□ 0.39
CTDSP1-209ENST00000488627 ZBTB33Q86T24 672 aa17.49■□□□□ 0.39
CTDSP1-209ENST00000488627 AUTS2Q8WXX7 1259 aa17.49■□□□□ 0.39
CTDSP1-209ENST00000488627 NECAB3Q96P71 396 aaPredicted RBP17.49■□□□□ 0.39
CTDSP1-209ENST00000488627 CACNG4Q9UBN1 327 aa17.49■□□□□ 0.39
CTDSP1-209ENST00000488627 TBX20Q9UMR3 447 aa17.49■□□□□ 0.39
CTDSP1-209ENST00000488627 PCDHA7Q9UN72 937 aa17.49■□□□□ 0.39
CTDSP1-209ENST00000488627 PLXNA4Q9HCM2 1894 aa17.48■□□□□ 0.39
CTDSP1-209ENST00000488627 H0YCG3 227 aa17.48■□□□□ 0.39
CTDSP1-209ENST00000488627 PIGRP01833 764 aa17.48■□□□□ 0.39
CTDSP1-209ENST00000488627 THP07101 528 aa17.48■□□□□ 0.39
CTDSP1-209ENST00000488627 NMT1P30419 496 aaKnown RBP17.48■□□□□ 0.39
CTDSP1-209ENST00000488627 STAT6P42226 847 aa17.48■□□□□ 0.39
CTDSP1-209ENST00000488627 GTF2BQ00403 316 aa17.48■□□□□ 0.39
CTDSP1-209ENST00000488627 MCL1Q07820 350 aa17.48■□□□□ 0.39
CTDSP1-209ENST00000488627 PTCRAQ6ISU1 281 aaPredicted RBP17.48■□□□□ 0.39
CTDSP1-209ENST00000488627 DYMQ7RTS9 669 aa17.48■□□□□ 0.39
CTDSP1-209ENST00000488627 APBB1IPQ7Z5R6 666 aaPredicted RBP17.48■□□□□ 0.39
CTDSP1-209ENST00000488627 PDILTQ8N807 584 aa17.48■□□□□ 0.39
CTDSP1-209ENST00000488627 KCNG4Q8TDN1 519 aa17.48■□□□□ 0.39
CTDSP1-209ENST00000488627 CHAMP1Q96JM3 812 aa17.48■□□□□ 0.39
CTDSP1-209ENST00000488627 RPS6KC1Q96S38 1066 aa17.48■□□□□ 0.39
CTDSP1-209ENST00000488627 PAAF1Q9BRP4 392 aa17.48■□□□□ 0.39
CTDSP1-209ENST00000488627 TCHPQ9BT92 498 aa17.48■□□□□ 0.39
CTDSP1-209ENST00000488627 ST6GALNAC4Q9H4F1 302 aa17.48■□□□□ 0.39
CTDSP1-209ENST00000488627 ATG2AQ2TAZ0 1938 aa17.47■□□□□ 0.39
CTDSP1-209ENST00000488627 CUL9Q8IWT3 2517 aa17.47■□□□□ 0.39
CTDSP1-209ENST00000488627 CLASP2O75122 1294 aaKnown RBP17.47■□□□□ 0.39
CTDSP1-209ENST00000488627 TBCAO75347 108 aaKnown RBP17.47■□□□□ 0.39
CTDSP1-209ENST00000488627 IL9P15248 144 aa17.47■□□□□ 0.39
CTDSP1-209ENST00000488627 SCP2P22307 547 aa17.47■□□□□ 0.39
CTDSP1-209ENST00000488627 OSTNP61366 133 aa17.47■□□□□ 0.39
CTDSP1-209ENST00000488627 TUSC3Q13454 348 aa17.47■□□□□ 0.39
CTDSP1-209ENST00000488627 PTPN14Q15678 1187 aa17.47■□□□□ 0.39
CTDSP1-209ENST00000488627 PUS10Q3MIT2 529 aaKnown RBP17.47■□□□□ 0.39
CTDSP1-209ENST00000488627 ZNF720Q7Z2F6 126 aa17.47■□□□□ 0.39
CTDSP1-209ENST00000488627 RABGGTAQ92696 567 aa17.47■□□□□ 0.39
CTDSP1-209ENST00000488627 PPP1R10Q96QC0 940 aaKnown RBP17.47■□□□□ 0.39
CTDSP1-209ENST00000488627 UHRF1Q96T88 793 aaPredicted RBP17.47■□□□□ 0.39
CTDSP1-209ENST00000488627 COLEC11Q9BWP8 271 aa17.47■□□□□ 0.39
CTDSP1-209ENST00000488627 STRA6Q9BX79 667 aa17.47■□□□□ 0.39
CTDSP1-209ENST00000488627 ZHX3Q9H4I2 956 aa17.47■□□□□ 0.39
CTDSP1-209ENST00000488627 STK39Q9UEW8 545 aa17.47■□□□□ 0.39
CTDSP1-209ENST00000488627 CFAP45Q9UL16 551 aa17.47■□□□□ 0.39
CTDSP1-209ENST00000488627 BARX2Q9UMQ3 279 aaPredicted RBP17.47■□□□□ 0.39
CTDSP1-209ENST00000488627 MUC3AQ02505 3323 aa17.46■□□□□ 0.39
CTDSP1-209ENST00000488627 SMIM28A0A1B0GU29 152 aa17.46■□□□□ 0.39
CTDSP1-209ENST00000488627 FRMD3A2A2Y4 597 aa17.46■□□□□ 0.39
CTDSP1-209ENST00000488627 K7ENM7 598 aa17.46■□□□□ 0.39
CTDSP1-209ENST00000488627 SOD2P04179 222 aa17.46■□□□□ 0.39
CTDSP1-209ENST00000488627 IGFBP6P24592 240 aaPredicted RBP17.46■□□□□ 0.39
CTDSP1-209ENST00000488627 NDUFV1P49821 464 aa17.46■□□□□ 0.39
CTDSP1-209ENST00000488627 COASYQ13057 564 aa17.46■□□□□ 0.39
CTDSP1-209ENST00000488627 CLUL1Q15846 466 aa17.46■□□□□ 0.39
CTDSP1-209ENST00000488627 ZC2HC1CQ53FD0 456 aaPredicted RBP17.46■□□□□ 0.39
CTDSP1-209ENST00000488627 GLRA4Q5JXX5 417 aa17.46■□□□□ 0.39
CTDSP1-209ENST00000488627 SLC39A4Q6P5W5 647 aa17.46■□□□□ 0.39
CTDSP1-209ENST00000488627 SFR1Q86XK3 245 aa17.46■□□□□ 0.39
CTDSP1-209ENST00000488627 FAM178BQ8IXR5 827 aa17.46■□□□□ 0.39
CTDSP1-209ENST00000488627 ZMAT2Q96NC0 199 aaKnown RBP17.46■□□□□ 0.39
CTDSP1-209ENST00000488627 ACAP3Q96P50 834 aa17.46■□□□□ 0.39
CTDSP1-209ENST00000488627 CCDC94Q9BW85 323 aaPredicted RBP17.46■□□□□ 0.39
CTDSP1-209ENST00000488627 GPR62Q9BZJ7 368 aa17.46■□□□□ 0.39
CTDSP1-209ENST00000488627 CHST7Q9NS84 486 aa17.46■□□□□ 0.39
CTDSP1-209ENST00000488627 KBTBD4Q9NVX7 518 aa17.46■□□□□ 0.39
CTDSP1-209ENST00000488627 CD207Q9UJ71 328 aa17.46■□□□□ 0.39
CTDSP1-209ENST00000488627 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.45■□□□□ 0.38
CTDSP1-209ENST00000488627 FSD2A1L4K1 749 aa17.45■□□□□ 0.38
CTDSP1-209ENST00000488627 CASTOR2A6NHX0 329 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms