RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 A0A0A6YYJ9 748 aa4.33□□□□□ -1.72
CD46-215ENST00000488596 GRID2IPA4D2P6 1211 aa4.33□□□□□ -1.72
CD46-215ENST00000488596 DAPK3O43293 454 aa4.33□□□□□ -1.72
CD46-215ENST00000488596 AKAP10O43572 662 aa4.33□□□□□ -1.72
CD46-215ENST00000488596 XPOTO43592 962 aaKnown RBP4.33□□□□□ -1.72
CD46-215ENST00000488596 OPHN1O60890 802 aa4.33□□□□□ -1.72
CD46-215ENST00000488596 IPO13O94829 963 aaKnown RBP4.33□□□□□ -1.72
CD46-215ENST00000488596 PARNO95453 639 aaKnown RBP4.33□□□□□ -1.72
CD46-215ENST00000488596 ABHD16AO95870 558 aa4.33□□□□□ -1.72
CD46-215ENST00000488596 CFBP00751 764 aa4.33□□□□□ -1.72
CD46-215ENST00000488596 FBLP22087 321 aaKnown RBP4.33□□□□□ -1.72
CD46-215ENST00000488596 PTPAQ15257 358 aa4.33□□□□□ -1.72
CD46-215ENST00000488596 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.33□□□□□ -1.72
CD46-215ENST00000488596 LY6G5CQ5SRR4 150 aa4.33□□□□□ -1.72
CD46-215ENST00000488596 KCNK18Q7Z418 384 aa4.33□□□□□ -1.72
CD46-215ENST00000488596 SLC41A1Q8IVJ1 513 aa4.33□□□□□ -1.72
CD46-215ENST00000488596 SYNE4Q8N205 404 aa4.33□□□□□ -1.72
CD46-215ENST00000488596 PPM1NQ8N819 430 aa4.33□□□□□ -1.72
CD46-215ENST00000488596 CPT1CQ8TCG5 803 aa4.33□□□□□ -1.72
CD46-215ENST00000488596 GAB3Q8WWW8 586 aa4.33□□□□□ -1.72
CD46-215ENST00000488596 JADE3Q92613 823 aa4.33□□□□□ -1.72
CD46-215ENST00000488596 CHMP4CQ96CF2 233 aa4.33□□□□□ -1.72
CD46-215ENST00000488596 IP6K2Q9UHH9 426 aa4.33□□□□□ -1.72
CD46-215ENST00000488596 SORCS3Q9UPU3 1222 aa4.33□□□□□ -1.72
CD46-215ENST00000488596 SPEF1Q9Y4P9 236 aa4.33□□□□□ -1.72
CD46-215ENST00000488596 A0A0A6YYK5 440 aaPredicted RBP4.32□□□□□ -1.72
CD46-215ENST00000488596 KLHL33A6NCF5 533 aa4.32□□□□□ -1.72
CD46-215ENST00000488596 TRIM75PA6NK02 468 aa4.32□□□□□ -1.72
CD46-215ENST00000488596 MARCH6O60337 910 aa4.32□□□□□ -1.72
CD46-215ENST00000488596 GNAT2P19087 354 aa4.32□□□□□ -1.72
CD46-215ENST00000488596 EPHB1P54762 984 aa4.32□□□□□ -1.72
CD46-215ENST00000488596 NPEPPSP55786 919 aa4.32□□□□□ -1.72
CD46-215ENST00000488596 PPARAQ07869 468 aa4.32□□□□□ -1.72
CD46-215ENST00000488596 FAM214AQ32MH5 1076 aa4.32□□□□□ -1.72
CD46-215ENST00000488596 KCNV1Q6PIU1 500 aa4.32□□□□□ -1.72
CD46-215ENST00000488596 LRRC55Q6ZSA7 311 aa4.32□□□□□ -1.72
CD46-215ENST00000488596 FMNL3Q8IVF7 1028 aa4.32□□□□□ -1.72
CD46-215ENST00000488596 TSR2Q969E8 191 aaKnown RBP4.32□□□□□ -1.72
CD46-215ENST00000488596 SOX7Q9BT81 388 aa4.32□□□□□ -1.72
CD46-215ENST00000488596 PITHD1Q9GZP4 211 aaPredicted RBP4.32□□□□□ -1.72
CD46-215ENST00000488596 ZNF768Q9H5H4 540 aaKnown RBP4.32□□□□□ -1.72
CD46-215ENST00000488596 RIOX1Q9H6W3 641 aa4.32□□□□□ -1.72
CD46-215ENST00000488596 C14orf93Q9H972 538 aaKnown RBP4.32□□□□□ -1.72
CD46-215ENST00000488596 ING3Q9NXR8 418 aa4.32□□□□□ -1.72
CD46-215ENST00000488596 ZIM2Q9NZV7 527 aa4.32□□□□□ -1.72
CD46-215ENST00000488596 ZNHIT2Q9UHR6 403 aa4.32□□□□□ -1.72
CD46-215ENST00000488596 EVLQ9UI08 416 aaPredicted RBP4.32□□□□□ -1.72
CD46-215ENST00000488596 LUC7L2Q9Y383 392 aaKnown RBP4.32□□□□□ -1.72
CD46-215ENST00000488596 PCDHB6Q9Y5E3 794 aa4.32□□□□□ -1.72
CD46-215ENST00000488596 GPR45Q9Y5Y3 372 aa4.32□□□□□ -1.72
CD46-215ENST00000488596 SCAF4O95104 1147 aaKnown RBP4.31□□□□□ -1.72
CD46-215ENST00000488596 SNUPNO95149 360 aaKnown RBP4.31□□□□□ -1.72
CD46-215ENST00000488596 ZSCAN20P17040 1043 aaPredicted RBP4.31□□□□□ -1.72
CD46-215ENST00000488596 MTNR1BP49286 362 aa4.31□□□□□ -1.72
CD46-215ENST00000488596 MRPS9P82933 396 aaKnown RBP4.31□□□□□ -1.72
CD46-215ENST00000488596 NFE2Q16621 373 aaPredicted RBP4.31□□□□□ -1.72
CD46-215ENST00000488596 MUM1Q2TAK8 710 aa4.31□□□□□ -1.72
CD46-215ENST00000488596 DCAF17Q5H9S7 520 aaPredicted RBP4.31□□□□□ -1.72
CD46-215ENST00000488596 APBB1IPQ7Z5R6 666 aaPredicted RBP4.31□□□□□ -1.72
CD46-215ENST00000488596 PRIMA1Q86XR5 153 aa4.31□□□□□ -1.72
CD46-215ENST00000488596 CDYL2Q8N8U2 506 aa4.31□□□□□ -1.72
CD46-215ENST00000488596 OR14C36Q8NHC7 312 aa4.31□□□□□ -1.72
CD46-215ENST00000488596 TSPEARQ8WU66 669 aa4.31□□□□□ -1.72
CD46-215ENST00000488596 AUTS2Q8WXX7 1259 aa4.31□□□□□ -1.72
CD46-215ENST00000488596 RAX2Q96IS3 184 aa4.31□□□□□ -1.72
CD46-215ENST00000488596 RTFDC1Q9BY42 306 aaPredicted RBP4.31□□□□□ -1.72
CD46-215ENST00000488596 SLC13A1Q9BZW2 595 aa4.31□□□□□ -1.72
CD46-215ENST00000488596 ENKD1Q9H0I2 346 aa4.31□□□□□ -1.72
CD46-215ENST00000488596 WNT8AQ9H1J5 351 aa4.31□□□□□ -1.72
CD46-215ENST00000488596 SYNPO2LQ9H987 977 aa4.31□□□□□ -1.72
CD46-215ENST00000488596 IFT122Q9HBG6 1241 aa4.31□□□□□ -1.72
CD46-215ENST00000488596 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.31□□□□□ -1.72
CD46-215ENST00000488596 TCEAL9Q9UHQ7 104 aa4.31□□□□□ -1.72
CD46-215ENST00000488596 ZNF180Q9UJW8 692 aa4.31□□□□□ -1.72
CD46-215ENST00000488596 NOB1Q9ULX3 412 aaKnown RBP4.31□□□□□ -1.72
CD46-215ENST00000488596 MRFAP1Q9Y605 127 aa4.31□□□□□ -1.72
CD46-215ENST00000488596 AHRRA9YTQ3 701 aa4.3□□□□□ -1.72
CD46-215ENST00000488596 MAFGO15525 162 aa4.3□□□□□ -1.72
CD46-215ENST00000488596 MTSS1O43312 755 aa4.3□□□□□ -1.72
CD46-215ENST00000488596 HOXA3O43365 443 aaPredicted RBP4.3□□□□□ -1.72
CD46-215ENST00000488596 B3GALT2O43825 422 aa4.3□□□□□ -1.72
CD46-215ENST00000488596 AGXTP21549 392 aa4.3□□□□□ -1.72
CD46-215ENST00000488596 C5AR1P21730 350 aa4.3□□□□□ -1.72
CD46-215ENST00000488596 FAM189BP81408 668 aa4.3□□□□□ -1.72
CD46-215ENST00000488596 CD69Q07108 199 aa4.3□□□□□ -1.72
CD46-215ENST00000488596 MGAT5Q09328 741 aa4.3□□□□□ -1.72
CD46-215ENST00000488596 HECTD2Q5U5R9 776 aa4.3□□□□□ -1.72
CD46-215ENST00000488596 EFCAB2Q5VUJ9 269 aa4.3□□□□□ -1.72
CD46-215ENST00000488596 OLFML1Q6UWY5 402 aa4.3□□□□□ -1.72
CD46-215ENST00000488596 CPA6Q8N4T0 437 aa4.3□□□□□ -1.72
CD46-215ENST00000488596 JPH3Q8WXH2 748 aaPredicted RBP4.3□□□□□ -1.72
CD46-215ENST00000488596 ZNF764Q96H86 408 aaPredicted RBP4.3□□□□□ -1.72
CD46-215ENST00000488596 HIST1H2AHQ96KK5 128 aa4.3□□□□□ -1.72
CD46-215ENST00000488596 TEKT5Q96M29 485 aa4.3□□□□□ -1.72
CD46-215ENST00000488596 BBC3Q96PG8 261 aaPredicted RBP4.3□□□□□ -1.72
CD46-215ENST00000488596 HIST1H2AJQ99878 128 aa4.3□□□□□ -1.72
CD46-215ENST00000488596 FDXACB1Q9BRP7 624 aaPredicted RBP4.3□□□□□ -1.72
CD46-215ENST00000488596 CPEB1Q9BZB8 566 aaKnown RBP4.3□□□□□ -1.72
CD46-215ENST00000488596 PTGFRNQ9P2B2 879 aa4.3□□□□□ -1.72
CD46-215ENST00000488596 CHPF2Q9P2E5 772 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms