RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 LRRC53A6NM62 1247 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 RNF225M0QZC1 329 aaPredicted RBP7.5□□□□□ -1.21
PDAP1-203ENST00000488214 CABYRO75952 493 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 NPTXRO95502 500 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 CXCL8P10145 99 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 MCF2P10911 925 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 DARSP14868 501 aaKnown RBP7.5□□□□□ -1.21
PDAP1-203ENST00000488214 TNNI1P19237 187 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 SLC9A1P19634 815 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 PROZP22891 400 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 PON1P27169 355 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 PIK3CAP42336 1068 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 ACLYP53396 1101 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 ZBED6P86452 979 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 CDC42EP1Q00587 391 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 BIRC3Q13489 604 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 ITGA7Q13683 1181 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 PSMD6Q15008 389 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 SNX17Q15036 470 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 PTGISQ16647 500 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 DCAF4L1Q3SXM0 396 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 C1orf220Q5T0J3 134 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 PDXDC1Q6P996 788 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 RRAGAQ7L523 313 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 APBB1IPQ7Z5R6 666 aaPredicted RBP7.5□□□□□ -1.21
PDAP1-203ENST00000488214 SESTD1Q86VW0 696 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 TMEM139Q8IV31 216 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 CEP120Q8N960 986 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 TMC2Q8TDI7 906 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 PARD3BQ8TEW8 1205 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 WNT8BQ93098 351 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 FAM212AQ96EL1 285 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 MFSD14AQ96MC6 490 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 GLT1D1Q96MS3 346 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 SPAG5Q96R06 1193 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 POP1Q99575 1024 aaKnown RBP7.5□□□□□ -1.21
PDAP1-203ENST00000488214 DNAJC7Q99615 494 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 CGRRF1Q99675 332 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 ADPGKQ9BRR6 497 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 TMEM8AQ9HCN3 771 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 PDE11AQ9HCR9 933 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.5□□□□□ -1.212e-32■■■■■ 127.8
PDAP1-203ENST00000488214 STARD7Q9NQZ5 370 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 TRMT13Q9NUP7 481 aaKnown RBP7.5□□□□□ -1.21
PDAP1-203ENST00000488214 AJAP1Q9UKB5 411 aaPredicted RBP7.5□□□□□ -1.21
PDAP1-203ENST00000488214 PIN4Q9Y237 131 aaKnown RBP7.5□□□□□ -1.21
PDAP1-203ENST00000488214 CDY2AQ9Y6F7 541 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 PTPRJQ12913 1337 aa7.5□□□□□ -1.21
PDAP1-203ENST00000488214 A0A0U1RQG5 324 aaPredicted RBP7.49□□□□□ -1.21
PDAP1-203ENST00000488214 RBAK-RBAKDNI3L0D1 243 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 P4HA2O15460 535 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 ARHGAP6O43182 974 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 FAM189A1O60320 539 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 NOL4O94818 638 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 CCL5P13501 91 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 UCHL3P15374 230 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 EIF4BP23588 611 aaKnown RBP7.49□□□□□ -1.21
PDAP1-203ENST00000488214 THPOP40225 353 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 ENPEPQ07075 957 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 NCBP1Q09161 790 aaKnown RBP7.49□□□□□ -1.21
PDAP1-203ENST00000488214 MTFR1Q15390 333 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 ASIC2Q16515 512 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 EPC2Q52LR7 807 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 TDRD12Q587J7 1177 aaKnown RBP7.49□□□□□ -1.21
PDAP1-203ENST00000488214 KLHDC7AQ5VTJ3 777 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 E4F1Q66K89 784 aaPredicted RBP7.49□□□□□ -1.21
PDAP1-203ENST00000488214 LHX8Q68G74 356 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 KRT39Q6A163 491 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 IQCEQ6IPM2 695 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 NOTUMQ6P988 496 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 GJB7Q6PEY0 223 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 CRELD2Q6UXH1 353 aaPredicted RBP7.49□□□□□ -1.21
PDAP1-203ENST00000488214 CYP26C1Q6V0L0 522 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 SERINC5Q86VE9 423 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 ARRDC4Q8NCT1 418 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 OR8K1Q8NGG5 319 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 TMEM40Q8WWA1 233 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 BAP1Q92560 729 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 DEFB118Q96PH6 123 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 TSEN34Q9BSV6 310 aaKnown RBP7.49□□□□□ -1.21
PDAP1-203ENST00000488214 DESI2Q9BSY9 194 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 NAA15Q9BXJ9 866 aaKnown RBP7.49□□□□□ -1.21
PDAP1-203ENST00000488214 MTMR12Q9C0I1 747 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 TMEM117Q9H0C3 514 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 RNF208Q9H0X6 261 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 RPF1Q9H9Y2 349 aaKnown RBP7.49□□□□□ -1.21
PDAP1-203ENST00000488214 CDHR5Q9HBB8 845 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 PTPRHQ9HD43 1115 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 SIX2Q9NPC8 291 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 PLCB1Q9NQ66 1216 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 ZNHIT6Q9NWK9 470 aaKnown RBP7.49□□□□□ -1.21
PDAP1-203ENST00000488214 APEX2Q9UBZ4 518 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 CPSF3Q9UKF6 684 aaKnown RBP7.49□□□□□ -1.21
PDAP1-203ENST00000488214 GRIN2DO15399 1336 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 SCN5AQ14524 2016 aa7.49□□□□□ -1.21
PDAP1-203ENST00000488214 DNM1LO00429 736 aa7.48□□□□□ -1.21
PDAP1-203ENST00000488214 PHACTR2O75167 634 aa7.48□□□□□ -1.21
PDAP1-203ENST00000488214 LRRN2O75325 713 aa7.48□□□□□ -1.21
PDAP1-203ENST00000488214 IL18RAPO95256 599 aa7.48□□□□□ -1.21
PDAP1-203ENST00000488214 RPLP2P05387 115 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms