RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 TTC28Q96AY4 2481 aa26.04■■□□□ 1.76
RNF38-208ENST00000488058 C2CD2LO14523 706 aa26.04■■□□□ 1.76
RNF38-208ENST00000488058 FAM13AO94988 1023 aa26.04■■□□□ 1.76
RNF38-208ENST00000488058 OSTNP61366 133 aa26.04■■□□□ 1.76
RNF38-208ENST00000488058 STK38Q15208 465 aa26.04■■□□□ 1.76
RNF38-208ENST00000488058 SMAD2Q15796 467 aaKnown RBP26.04■■□□□ 1.76
RNF38-208ENST00000488058 GJD3Q8N144 294 aa26.04■■□□□ 1.76
RNF38-208ENST00000488058 SMRP1Q8NCR6 262 aa26.04■■□□□ 1.76
RNF38-208ENST00000488058 CASP10Q92851 521 aa26.04■■□□□ 1.76
RNF38-208ENST00000488058 CDT1Q9H211 546 aa26.04■■□□□ 1.76
RNF38-208ENST00000488058 CXCL16Q9H2A7 254 aa26.04■■□□□ 1.76
RNF38-208ENST00000488058 STK39Q9UEW8 545 aa26.04■■□□□ 1.76
RNF38-208ENST00000488058 ODF2LQ9ULJ1 636 aa26.04■■□□□ 1.76
RNF38-208ENST00000488058 HCFC2Q9Y5Z7 792 aa26.04■■□□□ 1.76
RNF38-208ENST00000488058 CASTOR2A6NHX0 329 aa26.03■■□□□ 1.76
RNF38-208ENST00000488058 PTGESO14684 152 aa26.03■■□□□ 1.76
RNF38-208ENST00000488058 URODP06132 367 aa26.03■■□□□ 1.76
RNF38-208ENST00000488058 THP07101 528 aa26.03■■□□□ 1.76
RNF38-208ENST00000488058 TUSC3Q13454 348 aa26.03■■□□□ 1.76
RNF38-208ENST00000488058 KCNC3Q14003 757 aa26.03■■□□□ 1.76
RNF38-208ENST00000488058 SLC39A14Q15043 492 aa26.03■■□□□ 1.76
RNF38-208ENST00000488058 PTPN14Q15678 1187 aa26.03■■□□□ 1.76
RNF38-208ENST00000488058 ANKRD54Q6NXT1 300 aa26.03■■□□□ 1.76
RNF38-208ENST00000488058 MYCT1Q8N699 235 aa26.03■■□□□ 1.76
RNF38-208ENST00000488058 CEP120Q8N960 986 aa26.03■■□□□ 1.76
RNF38-208ENST00000488058 TMEM161BQ8NDZ6 487 aa26.03■■□□□ 1.76
RNF38-208ENST00000488058 NTPCRQ9BSD7 190 aaKnown RBP26.03■■□□□ 1.76
RNF38-208ENST00000488058 HERC2P3Q9BVR0 1158 aa26.03■■□□□ 1.76
RNF38-208ENST00000488058 MRPL17Q9NRX2 175 aaKnown RBP26.03■■□□□ 1.76
RNF38-208ENST00000488058 USP15Q9Y4E8 981 aaPredicted RBP26.03■■□□□ 1.76
RNF38-208ENST00000488058 SOD2P04179 222 aa26.02■■□□□ 1.76
RNF38-208ENST00000488058 GLRA4Q5JXX5 417 aa26.02■■□□□ 1.76
RNF38-208ENST00000488058 TMEM184AQ6ZMB5 413 aa26.02■■□□□ 1.76
RNF38-208ENST00000488058 KRI1Q8N9T8 703 aaKnown RBP26.02■■□□□ 1.76
RNF38-208ENST00000488058 ZNF396Q96N95 335 aaPredicted RBP26.02■■□□□ 1.76
RNF38-208ENST00000488058 CCDC94Q9BW85 323 aaPredicted RBP26.02■■□□□ 1.76
RNF38-208ENST00000488058 EMILIN2Q9BXX0 1053 aa26.02■■□□□ 1.76
RNF38-208ENST00000488058 ANKFY1Q9P2R3 1169 aa26.02■■□□□ 1.76
RNF38-208ENST00000488058 TFIP11Q9UBB9 837 aaKnown RBP26.02■■□□□ 1.76
RNF38-208ENST00000488058 PRKAG3Q9UGI9 489 aa26.02■■□□□ 1.76
RNF38-208ENST00000488058 IRAK3Q9Y616 596 aa26.02■■□□□ 1.76
RNF38-208ENST00000488058 TBCAO75347 108 aaKnown RBP26.01■■□□□ 1.75
RNF38-208ENST00000488058 MAPTP10636 758 aaKnown RBP26.01■■□□□ 1.75
RNF38-208ENST00000488058 MATR3P43243 847 aaKnown RBP eCLIP26.01■■□□□ 1.75
RNF38-208ENST00000488058 YARSP54577 528 aaKnown RBP26.01■■□□□ 1.75
RNF38-208ENST00000488058 ZP2Q05996 745 aa26.01■■□□□ 1.75
RNF38-208ENST00000488058 FOXD4L6Q3SYB3 417 aaPredicted RBP26.01■■□□□ 1.75
RNF38-208ENST00000488058 RRAGBQ5VZM2 374 aa26.01■■□□□ 1.75
RNF38-208ENST00000488058 MPZL3Q6UWV2 235 aa26.01■■□□□ 1.75
RNF38-208ENST00000488058 FOXD4L3Q6VB84 417 aaPredicted RBP26.01■■□□□ 1.75
RNF38-208ENST00000488058 TAS1R1Q7RTX1 841 aa26.01■■□□□ 1.75
RNF38-208ENST00000488058 ADHFE1Q8IWW8 467 aa26.01■■□□□ 1.75
RNF38-208ENST00000488058 HASPINQ8TF76 798 aa26.01■■□□□ 1.75
RNF38-208ENST00000488058 BICD1Q96G01 975 aa26.01■■□□□ 1.75
RNF38-208ENST00000488058 PAAF1Q9BRP4 392 aa26.01■■□□□ 1.75
RNF38-208ENST00000488058 PTPRHQ9HD43 1115 aa26.01■■□□□ 1.75
RNF38-208ENST00000488058 TRIP11Q15643 1979 aa26■■□□□ 1.75
RNF38-208ENST00000488058 H0YCG3 227 aa26■■□□□ 1.75
RNF38-208ENST00000488058 K7ENM7 598 aa26■■□□□ 1.75
RNF38-208ENST00000488058 TADA2AO75478 443 aa26■■□□□ 1.75
RNF38-208ENST00000488058 KLRC2P26717 231 aa26■■□□□ 1.75
RNF38-208ENST00000488058 DDIT3P35638 169 aa26■■□□□ 1.75
RNF38-208ENST00000488058 GRM5P41594 1212 aa26■■□□□ 1.75
RNF38-208ENST00000488058 NASPP49321 788 aaPredicted RBP26■■□□□ 1.75
RNF38-208ENST00000488058 GLUD2P49448 558 aa26■■□□□ 1.75
RNF38-208ENST00000488058 NCKAP1LP55160 1127 aa26■■□□□ 1.75
RNF38-208ENST00000488058 HSP90AA2PQ14568 343 aaPredicted RBP26■■□□□ 1.75
RNF38-208ENST00000488058 KIAA1841Q6NSI8 718 aa26■■□□□ 1.75
RNF38-208ENST00000488058 FUT10Q6P4F1 479 aa26■■□□□ 1.75
RNF38-208ENST00000488058 HAUS6Q7Z4H7 955 aa26■■□□□ 1.75
RNF38-208ENST00000488058 ZBTB45Q96K62 511 aaPredicted RBP26■■□□□ 1.75
RNF38-208ENST00000488058 KLHL5Q96PQ7 755 aa26■■□□□ 1.75
RNF38-208ENST00000488058 PARVGQ9HBI0 331 aa26■■□□□ 1.75
RNF38-208ENST00000488058 STK17AQ9UEE5 414 aa26■■□□□ 1.75
RNF38-208ENST00000488058 ADAM28Q9UKQ2 775 aa26■■□□□ 1.75
RNF38-208ENST00000488058 MCF2P10911 925 aa25.99■■□□□ 1.75
RNF38-208ENST00000488058 EPCAMP16422 314 aa25.99■■□□□ 1.75
RNF38-208ENST00000488058 SYCE2Q6PIF2 218 aa25.99■■□□□ 1.75
RNF38-208ENST00000488058 B3GALT6Q96L58 329 aa25.99■■□□□ 1.75
RNF38-208ENST00000488058 TOPORSQ9NS56 1045 aaPredicted RBP25.99■■□□□ 1.75
RNF38-208ENST00000488058 DAXXQ9UER7 740 aaPredicted RBP25.99■■□□□ 1.75
RNF38-208ENST00000488058 SSX2IPQ9Y2D8 614 aa25.99■■□□□ 1.75
RNF38-208ENST00000488058 SPDYE4A6NLX3 237 aa25.98■■□□□ 1.75
RNF38-208ENST00000488058 CNPP09543 421 aaKnown RBP25.98■■□□□ 1.75
RNF38-208ENST00000488058 ZSCAN22P10073 491 aaPredicted RBP25.98■■□□□ 1.75
RNF38-208ENST00000488058 PROZP22891 400 aa25.98■■□□□ 1.75
RNF38-208ENST00000488058 TPRNQ4KMQ1 711 aa25.98■■□□□ 1.75
RNF38-208ENST00000488058 DYMQ7RTS9 669 aa25.98■■□□□ 1.75
RNF38-208ENST00000488058 LINC00301Q8NCQ3 95 aa25.98■■□□□ 1.75
RNF38-208ENST00000488058 KHSRPQ92945 711 aaKnown RBP eCLIP25.98■■□□□ 1.75
RNF38-208ENST00000488058 POP1Q99575 1024 aaKnown RBP25.98■■□□□ 1.75
RNF38-208ENST00000488058 PANK2Q9BZ23 570 aa25.98■■□□□ 1.75
RNF38-208ENST00000488058 GPR62Q9BZJ7 368 aa25.98■■□□□ 1.75
RNF38-208ENST00000488058 SPTLC2O15270 562 aa25.97■■□□□ 1.75
RNF38-208ENST00000488058 TRAK2O60296 914 aa25.97■■□□□ 1.75
RNF38-208ENST00000488058 TOM1L1O75674 476 aa25.97■■□□□ 1.75
RNF38-208ENST00000488058 F13A1P00488 732 aa25.97■■□□□ 1.75
RNF38-208ENST00000488058 HOXB8P17481 243 aaPredicted RBP25.97■■□□□ 1.75
RNF38-208ENST00000488058 NOLC1Q14978 699 aaKnown RBP eCLIP25.97■■□□□ 1.75
RNF38-208ENST00000488058 PPFIBP1Q86W92 1011 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms