RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 UGT8Q16880 541 aa6.08□□□□□ -1.44
SMC4-219ENST00000487747 STRA8Q7Z7C7 330 aa6.08□□□□□ -1.44
SMC4-219ENST00000487747 PLXDC1Q8IUK5 500 aa6.08□□□□□ -1.44
SMC4-219ENST00000487747 UBR7Q8N806 425 aa6.08□□□□□ -1.44
SMC4-219ENST00000487747 ASB10Q8WXI3 467 aa6.08□□□□□ -1.44
SMC4-219ENST00000487747 PHACTR3Q96KR7 559 aa6.08□□□□□ -1.44
SMC4-219ENST00000487747 DRGXA6NNA5 263 aa6.07□□□□□ -1.44
SMC4-219ENST00000487747 ZAR1LA6NP61 321 aa6.07□□□□□ -1.44
SMC4-219ENST00000487747 ADSLP30566 484 aaPredicted RBP6.07□□□□□ -1.44
SMC4-219ENST00000487747 BMPR1AP36894 532 aa6.07□□□□□ -1.44
SMC4-219ENST00000487747 PLA2G5P39877 138 aa6.07□□□□□ -1.44
SMC4-219ENST00000487747 IL12RB1P42701 662 aa6.07□□□□□ -1.44
SMC4-219ENST00000487747 CHN2P52757 468 aa6.07□□□□□ -1.44
SMC4-219ENST00000487747 FSCN1Q16658 493 aaKnown RBP6.07□□□□□ -1.44
SMC4-219ENST00000487747 Q6ZVL8 140 aa6.07□□□□□ -1.44
SMC4-219ENST00000487747 HDGFL2Q7Z4V5 671 aaPredicted RBP6.07□□□□□ -1.44
SMC4-219ENST00000487747 VOPP1Q96AW1 172 aa6.07□□□□□ -1.44
SMC4-219ENST00000487747 BBC3Q96PG8 261 aaPredicted RBP6.07□□□□□ -1.44
SMC4-219ENST00000487747 RPTORQ8N122 1335 aa6.06□□□□□ -1.44
SMC4-219ENST00000487747 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.06□□□□□ -1.44
SMC4-219ENST00000487747 MARCH11A6NNE9 402 aa6.06□□□□□ -1.44
SMC4-219ENST00000487747 SPDEFO95238 335 aa6.06□□□□□ -1.44
SMC4-219ENST00000487747 GASTP01350 101 aa6.06□□□□□ -1.44
SMC4-219ENST00000487747 RBP3P10745 1247 aa6.06□□□□□ -1.44
SMC4-219ENST00000487747 TYRP1P17643 537 aa6.06□□□□□ -1.44
SMC4-219ENST00000487747 DDX6P26196 483 aaKnown RBP eCLIP6.06□□□□□ -1.44
SMC4-219ENST00000487747 CRHR1P34998 444 aa6.06□□□□□ -1.44
SMC4-219ENST00000487747 PTH2RP49190 550 aa6.06□□□□□ -1.44
SMC4-219ENST00000487747 GUCY1B3Q02153 619 aa6.06□□□□□ -1.44
SMC4-219ENST00000487747 DHCR24Q15392 516 aa6.06□□□□□ -1.44
SMC4-219ENST00000487747 MST1LQ2TV78 715 aa6.06□□□□□ -1.44
SMC4-219ENST00000487747 RNF180Q86T96 592 aa6.06□□□□□ -1.44
SMC4-219ENST00000487747 PRIMA1Q86XR5 153 aa6.06□□□□□ -1.44
SMC4-219ENST00000487747 TRMT2AQ8IZ69 625 aaKnown RBP6.06□□□□□ -1.44
SMC4-219ENST00000487747 LCORLQ8N3X6 602 aa6.06□□□□□ -1.44
SMC4-219ENST00000487747 TSPEARQ8WU66 669 aa6.06□□□□□ -1.44
SMC4-219ENST00000487747 TGFBRAP1Q8WUH2 860 aa6.06□□□□□ -1.44
SMC4-219ENST00000487747 ZNF480Q8WV37 535 aa6.06□□□□□ -1.44
SMC4-219ENST00000487747 RIN2Q8WYP3 895 aaPredicted RBP6.06□□□□□ -1.44
SMC4-219ENST00000487747 LINC00476Q8WZB0 136 aa6.06□□□□□ -1.44
SMC4-219ENST00000487747 USP7Q93009 1102 aa6.06□□□□□ -1.44
SMC4-219ENST00000487747 VTA1Q9NP79 307 aa6.06□□□□□ -1.44
SMC4-219ENST00000487747 MAPRE3Q9UPY8 281 aa6.06□□□□□ -1.44
SMC4-219ENST00000487747 ATRNL1Q5VV63 1379 aa6.06□□□□□ -1.44
SMC4-219ENST00000487747 PIPSLA2A3N6 862 aa6.05□□□□□ -1.44
SMC4-219ENST00000487747 CXorf49A8MYA2 514 aaPredicted RBP6.05□□□□□ -1.44
SMC4-219ENST00000487747 DIRC3C9JPN6 131 aa6.05□□□□□ -1.44
SMC4-219ENST00000487747 ELANEP08246 267 aa6.05□□□□□ -1.44
SMC4-219ENST00000487747 ENPP1P22413 925 aa6.05□□□□□ -1.44
SMC4-219ENST00000487747 PTPN7P35236 360 aa6.05□□□□□ -1.44
SMC4-219ENST00000487747 FLT3LGP49771 235 aa6.05□□□□□ -1.44
SMC4-219ENST00000487747 SEC24CP53992 1094 aa6.05□□□□□ -1.44
SMC4-219ENST00000487747 USP14P54578 494 aa6.05□□□□□ -1.44
SMC4-219ENST00000487747 GYS2P54840 703 aa6.05□□□□□ -1.44
SMC4-219ENST00000487747 TAP1Q03518 808 aa6.05□□□□□ -1.44
SMC4-219ENST00000487747 STRN3Q13033 797 aa6.05□□□□□ -1.44
SMC4-219ENST00000487747 RESTQ13127 1097 aa6.05□□□□□ -1.44
SMC4-219ENST00000487747 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.05□□□□□ -1.444e-9■■■■■ 118.1
SMC4-219ENST00000487747 FAM47AQ5JRC9 791 aa6.05□□□□□ -1.44
SMC4-219ENST00000487747 THNSL2Q86YJ6 484 aa6.05□□□□□ -1.44
SMC4-219ENST00000487747 SUPT20HQ8NEM7 779 aa6.05□□□□□ -1.44
SMC4-219ENST00000487747 ZNF764Q96H86 408 aaPredicted RBP6.05□□□□□ -1.44
SMC4-219ENST00000487747 R3HDMLQ9H3Y0 253 aa6.05□□□□□ -1.44
SMC4-219ENST00000487747 CCDC78A2IDD5 438 aa6.04□□□□□ -1.44
SMC4-219ENST00000487747 ENPP3O14638 875 aa6.04□□□□□ -1.44
SMC4-219ENST00000487747 AKR1B10O60218 316 aa6.04□□□□□ -1.44
SMC4-219ENST00000487747 FBLP22087 321 aaKnown RBP6.04□□□□□ -1.44
SMC4-219ENST00000487747 MGAT1P26572 445 aa6.04□□□□□ -1.44
SMC4-219ENST00000487747 CCDC142Q17RM4 750 aa6.04□□□□□ -1.44
SMC4-219ENST00000487747 AGAP9Q5VTM2 703 aa6.04□□□□□ -1.44
SMC4-219ENST00000487747 ADGRG3Q86Y34 549 aa6.04□□□□□ -1.44
SMC4-219ENST00000487747 IFT22Q9H7X7 185 aa6.04□□□□□ -1.44
SMC4-219ENST00000487747 ALG13Q9NP73 1137 aaKnown RBP6.04□□□□□ -1.44
SMC4-219ENST00000487747 PTGFRNQ9P2B2 879 aa6.04□□□□□ -1.44
SMC4-219ENST00000487747 FPGT-TNNI3KV9GXZ4 949 aa6.04□□□□□ -1.44
SMC4-219ENST00000487747 SALL3Q9BXA9 1300 aa6.03□□□□□ -1.44
SMC4-219ENST00000487747 EGR2P11161 476 aaPredicted RBP6.03□□□□□ -1.44
SMC4-219ENST00000487747 ALOX15P16050 662 aaPredicted RBP6.03□□□□□ -1.44
SMC4-219ENST00000487747 CLRN1P58418 232 aa6.03□□□□□ -1.44
SMC4-219ENST00000487747 RAP2BP61225 183 aa6.03□□□□□ -1.44
SMC4-219ENST00000487747 SCAPQ12770 1279 aa6.03□□□□□ -1.44
SMC4-219ENST00000487747 ATXN7L2Q5T6C5 722 aaPredicted RBP6.03□□□□□ -1.44
SMC4-219ENST00000487747 PDZD4Q76G19 769 aaPredicted RBP6.03□□□□□ -1.44
SMC4-219ENST00000487747 ZNF572Q7Z3I7 529 aaPredicted RBP6.03□□□□□ -1.44
SMC4-219ENST00000487747 GPR156Q8NFN8 814 aa6.03□□□□□ -1.44
SMC4-219ENST00000487747 ZFP28Q8NHY6 868 aa6.03□□□□□ -1.44
SMC4-219ENST00000487747 STON2Q8WXE9 905 aa6.03□□□□□ -1.44
SMC4-219ENST00000487747 CAVIN3Q969G5 261 aa6.03□□□□□ -1.44
SMC4-219ENST00000487747 TTC1Q99614 292 aa6.03□□□□□ -1.44
SMC4-219ENST00000487747 QRSL1Q9H0R6 528 aaKnown RBP6.03□□□□□ -1.44
SMC4-219ENST00000487747 DMRT3Q9NQL9 472 aa6.03□□□□□ -1.44
SMC4-219ENST00000487747 CFIP05156 583 aa6.02□□□□□ -1.45
SMC4-219ENST00000487747 SESN3P58005 492 aa6.02□□□□□ -1.45
SMC4-219ENST00000487747 ADRM1Q16186 407 aa6.02□□□□□ -1.45
SMC4-219ENST00000487747 TSHZ3Q63HK5 1081 aa6.02□□□□□ -1.45
SMC4-219ENST00000487747 B3GNTL1Q67FW5 361 aaPredicted RBP6.02□□□□□ -1.45
SMC4-219ENST00000487747 MED25Q71SY5 747 aa6.02□□□□□ -1.45
SMC4-219ENST00000487747 DDX46Q7L014 1031 aaKnown RBP6.02□□□□□ -1.45
SMC4-219ENST00000487747 OR7D4Q8NG98 312 aa6.02□□□□□ -1.45
SMC4-219ENST00000487747 OR56A1Q8NGH5 318 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms