RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 WDR11Q9BZH6 1224 aa5.66□□□□□ -1.5
CCDC66-221ENST00000487739 RIOX1Q9H6W3 641 aa5.66□□□□□ -1.5
CCDC66-221ENST00000487739 NEMP1O14524 444 aa5.65□□□□□ -1.5
CCDC66-221ENST00000487739 PJA2O43164 708 aa5.65□□□□□ -1.5
CCDC66-221ENST00000487739 CANXP27824 592 aaKnown RBP5.65□□□□□ -1.5
CCDC66-221ENST00000487739 MXRA7P84157 204 aa5.65□□□□□ -1.5
CCDC66-221ENST00000487739 GUCY1B3Q02153 619 aa5.65□□□□□ -1.5
CCDC66-221ENST00000487739 PDCD4Q53EL6 469 aaKnown RBP5.65□□□□□ -1.5
CCDC66-221ENST00000487739 MFSD14BQ5SR56 506 aa5.65□□□□□ -1.5
CCDC66-221ENST00000487739 GJC2Q5T442 439 aaPredicted RBP5.65□□□□□ -1.5
CCDC66-221ENST00000487739 DDX46Q7L014 1031 aaKnown RBP5.65□□□□□ -1.5
CCDC66-221ENST00000487739 RNF180Q86T96 592 aa5.65□□□□□ -1.5
CCDC66-221ENST00000487739 TEX101Q9BY14 249 aa5.65□□□□□ -1.5
CCDC66-221ENST00000487739 DPP7Q9UHL4 492 aa5.65□□□□□ -1.5
CCDC66-221ENST00000487739 ZAR1LA6NP61 321 aa5.64□□□□□ -1.51
CCDC66-221ENST00000487739 ZNF185O15231 689 aa5.64□□□□□ -1.51
CCDC66-221ENST00000487739 DDX6P26196 483 aaKnown RBP eCLIP5.64□□□□□ -1.51
CCDC66-221ENST00000487739 PTPN7P35236 360 aa5.64□□□□□ -1.51
CCDC66-221ENST00000487739 ID4P47928 161 aa5.64□□□□□ -1.51
CCDC66-221ENST00000487739 FAM47AQ5JRC9 791 aa5.64□□□□□ -1.51
CCDC66-221ENST00000487739 OLFML1Q6UWY5 402 aa5.64□□□□□ -1.51
CCDC66-221ENST00000487739 PRIMA1Q86XR5 153 aa5.64□□□□□ -1.51
CCDC66-221ENST00000487739 CMTR2Q8IYT2 770 aaKnown RBP5.64□□□□□ -1.51
CCDC66-221ENST00000487739 COQ10AQ96MF6 247 aa5.64□□□□□ -1.51
CCDC66-221ENST00000487739 DKK2Q9UBU2 259 aa5.64□□□□□ -1.51
CCDC66-221ENST00000487739 EDARQ9UNE0 448 aa5.64□□□□□ -1.51
CCDC66-221ENST00000487739 USP15Q9Y4E8 981 aaPredicted RBP5.64□□□□□ -1.51
CCDC66-221ENST00000487739 FPGT-TNNI3KV9GXZ4 949 aa5.64□□□□□ -1.51
CCDC66-221ENST00000487739 ADCY6O43306 1168 aa5.63□□□□□ -1.51
CCDC66-221ENST00000487739 AKR1B10O60218 316 aa5.63□□□□□ -1.51
CCDC66-221ENST00000487739 SNRPA1P09661 255 aaKnown RBP5.63□□□□□ -1.51
CCDC66-221ENST00000487739 FBLP22087 321 aaKnown RBP5.63□□□□□ -1.51
CCDC66-221ENST00000487739 GYS2P54840 703 aa5.63□□□□□ -1.51
CCDC66-221ENST00000487739 CLRN1P58418 232 aa5.63□□□□□ -1.51
CCDC66-221ENST00000487739 BLOC1S1P78537 153 aa5.63□□□□□ -1.51
CCDC66-221ENST00000487739 MRPS9P82933 396 aaKnown RBP5.63□□□□□ -1.51
CCDC66-221ENST00000487739 CDK17Q00537 523 aa5.63□□□□□ -1.51
CCDC66-221ENST00000487739 STRN3Q13033 797 aa5.63□□□□□ -1.51
CCDC66-221ENST00000487739 ATXN7L2Q5T6C5 722 aaPredicted RBP5.63□□□□□ -1.51
CCDC66-221ENST00000487739 FAM102AQ5T9C2 384 aaPredicted RBP5.63□□□□□ -1.51
CCDC66-221ENST00000487739 STRIP1Q5VSL9 837 aa5.63□□□□□ -1.51
CCDC66-221ENST00000487739 ARMC6Q6NXE6 501 aa5.63□□□□□ -1.51
CCDC66-221ENST00000487739 FAM180AQ6UWF9 173 aa5.63□□□□□ -1.51
CCDC66-221ENST00000487739 NOP9Q86U38 636 aaKnown RBP5.63□□□□□ -1.51
CCDC66-221ENST00000487739 THNSL2Q86YJ6 484 aa5.63□□□□□ -1.51
CCDC66-221ENST00000487739 AUTS2Q8WXX7 1259 aa5.63□□□□□ -1.51
CCDC66-221ENST00000487739 SYBUQ9NX95 663 aa5.63□□□□□ -1.51
CCDC66-221ENST00000487739 UNC119BA6NIH7 251 aa5.62□□□□□ -1.51
CCDC66-221ENST00000487739 MARCH11A6NNE9 402 aa5.62□□□□□ -1.51
CCDC66-221ENST00000487739 CXorf49A8MYA2 514 aaPredicted RBP5.62□□□□□ -1.51
CCDC66-221ENST00000487739 HKR1P10072 659 aa5.62□□□□□ -1.51
CCDC66-221ENST00000487739 CHN2P52757 468 aa5.62□□□□□ -1.51
CCDC66-221ENST00000487739 ABHD17BQ5VST6 288 aa5.62□□□□□ -1.51
CCDC66-221ENST00000487739 ZNF572Q7Z3I7 529 aaPredicted RBP5.62□□□□□ -1.51
CCDC66-221ENST00000487739 TRMT2AQ8IZ69 625 aaKnown RBP5.62□□□□□ -1.51
CCDC66-221ENST00000487739 GPR156Q8NFN8 814 aa5.62□□□□□ -1.51
CCDC66-221ENST00000487739 OR7D4Q8NG98 312 aa5.62□□□□□ -1.51
CCDC66-221ENST00000487739 SLC35B2Q8TB61 432 aa5.62□□□□□ -1.51
CCDC66-221ENST00000487739 RIN2Q8WYP3 895 aaPredicted RBP5.62□□□□□ -1.51
CCDC66-221ENST00000487739 CAVIN3Q969G5 261 aa5.62□□□□□ -1.51
CCDC66-221ENST00000487739 BCO1Q9HAY6 547 aa5.62□□□□□ -1.51
CCDC66-221ENST00000487739 ATP11BQ9Y2G3 1177 aa5.62□□□□□ -1.51
CCDC66-221ENST00000487739 TBX22Q9Y458 520 aa5.62□□□□□ -1.51
CCDC66-221ENST00000487739 PIPSLA2A3N6 862 aa5.61□□□□□ -1.51
CCDC66-221ENST00000487739 DRGXA6NNA5 263 aa5.61□□□□□ -1.51
CCDC66-221ENST00000487739 MTHFD2P13995 350 aa5.61□□□□□ -1.51
CCDC66-221ENST00000487739 ECHS1P30084 290 aa5.61□□□□□ -1.51
CCDC66-221ENST00000487739 ADSLP30566 484 aaPredicted RBP5.61□□□□□ -1.51
CCDC66-221ENST00000487739 SOX5P35711 763 aa5.61□□□□□ -1.51
CCDC66-221ENST00000487739 CCT2P78371 535 aaKnown RBP5.61□□□□□ -1.51
CCDC66-221ENST00000487739 TP53BP2Q13625 1128 aa5.61□□□□□ -1.51
CCDC66-221ENST00000487739 RRP12Q5JTH9 1297 aaKnown RBP5.61□□□□□ -1.51
CCDC66-221ENST00000487739 AGAP9Q5VTM2 703 aa5.61□□□□□ -1.51
CCDC66-221ENST00000487739 METRNLQ641Q3 311 aa5.61□□□□□ -1.51
CCDC66-221ENST00000487739 RHOT2Q8IXI1 618 aa5.61□□□□□ -1.51
CCDC66-221ENST00000487739 REPS2Q8NFH8 660 aa5.61□□□□□ -1.51
CCDC66-221ENST00000487739 TSPEARQ8WU66 669 aa5.61□□□□□ -1.51
CCDC66-221ENST00000487739 LINC00476Q8WZB0 136 aa5.61□□□□□ -1.51
CCDC66-221ENST00000487739 NEU1Q99519 415 aa5.61□□□□□ -1.51
CCDC66-221ENST00000487739 ADAM2Q99965 735 aa5.61□□□□□ -1.51
CCDC66-221ENST00000487739 QRSL1Q9H0R6 528 aaKnown RBP5.61□□□□□ -1.51
CCDC66-221ENST00000487739 SYNPO2LQ9H987 977 aa5.61□□□□□ -1.51
CCDC66-221ENST00000487739 PTGFRNQ9P2B2 879 aa5.61□□□□□ -1.51
CCDC66-221ENST00000487739 MAP3K2Q9Y2U5 619 aa5.61□□□□□ -1.51
CCDC66-221ENST00000487739 KIAA0355O15063 1070 aa5.6□□□□□ -1.51
CCDC66-221ENST00000487739 CFIP05156 583 aa5.6□□□□□ -1.51
CCDC66-221ENST00000487739 SEC24CP53992 1094 aa5.6□□□□□ -1.51
CCDC66-221ENST00000487739 RESTQ13127 1097 aa5.6□□□□□ -1.51
CCDC66-221ENST00000487739 SP140Q13342 867 aa5.6□□□□□ -1.51
CCDC66-221ENST00000487739 ADRM1Q16186 407 aa5.6□□□□□ -1.51
CCDC66-221ENST00000487739 MUM1Q2TAK8 710 aa5.6□□□□□ -1.51
CCDC66-221ENST00000487739 ADGRG3Q86Y34 549 aa5.6□□□□□ -1.51
CCDC66-221ENST00000487739 DRC7Q8IY82 874 aa5.6□□□□□ -1.51
CCDC66-221ENST00000487739 OR56A1Q8NGH5 318 aa5.6□□□□□ -1.51
CCDC66-221ENST00000487739 FATE1Q969F0 183 aa5.6□□□□□ -1.51
CCDC66-221ENST00000487739 VOPP1Q96AW1 172 aa5.6□□□□□ -1.51
CCDC66-221ENST00000487739 ZNF764Q96H86 408 aaPredicted RBP5.6□□□□□ -1.51
CCDC66-221ENST00000487739 PHACTR3Q96KR7 559 aa5.6□□□□□ -1.51
CCDC66-221ENST00000487739 UHRF1Q96T88 793 aaPredicted RBP5.6□□□□□ -1.51
CCDC66-221ENST00000487739 REXO4Q9GZR2 422 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms