RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 CACNA2D4Q7Z3S7 1137 aa6.62□□□□□ -1.35
COL4A3-206ENST00000487633 MRPL10Q7Z7H8 261 aaKnown RBP6.62□□□□□ -1.35
COL4A3-206ENST00000487633 RAB11FIP4Q86YS3 637 aa6.62□□□□□ -1.35
COL4A3-206ENST00000487633 HS6ST3Q8IZP7 471 aa6.62□□□□□ -1.35
COL4A3-206ENST00000487633 ZNF843Q8N446 348 aa6.62□□□□□ -1.35
COL4A3-206ENST00000487633 SRBD1Q8N5C6 995 aaKnown RBP6.62□□□□□ -1.35
COL4A3-206ENST00000487633 PNPLA1Q8N8W4 532 aa6.62□□□□□ -1.35
COL4A3-206ENST00000487633 LNX1Q8TBB1 728 aaPredicted RBP6.62□□□□□ -1.35
COL4A3-206ENST00000487633 NLRP7Q8WX94 980 aa6.62□□□□□ -1.35
COL4A3-206ENST00000487633 DNASE1L2Q92874 299 aa6.62□□□□□ -1.35
COL4A3-206ENST00000487633 CDHR1Q96JP9 859 aa6.62□□□□□ -1.35
COL4A3-206ENST00000487633 ZFYVE19Q96K21 471 aa6.62□□□□□ -1.35
COL4A3-206ENST00000487633 ZC3H10Q96K80 434 aaKnown RBP6.62□□□□□ -1.35
COL4A3-206ENST00000487633 GAD1Q99259 594 aa6.62□□□□□ -1.35
COL4A3-206ENST00000487633 EIF2AQ9BY44 585 aaKnown RBP6.62□□□□□ -1.35
COL4A3-206ENST00000487633 RSAD1Q9HA92 442 aa6.62□□□□□ -1.35
COL4A3-206ENST00000487633 LY9Q9HBG7 655 aa6.62□□□□□ -1.35
COL4A3-206ENST00000487633 VPS45Q9NRW7 570 aa6.62□□□□□ -1.35
COL4A3-206ENST00000487633 FNIP2Q9P278 1114 aa6.62□□□□□ -1.35
COL4A3-206ENST00000487633 GABBR1Q9UBS5 961 aa6.62□□□□□ -1.35
COL4A3-206ENST00000487633 MRPS17Q9Y2R5 130 aaKnown RBP6.62□□□□□ -1.35
COL4A3-206ENST00000487633 ATMQ13315 3056 aa6.62□□□□□ -1.35
COL4A3-206ENST00000487633 PCDH15Q96QU1 1955 aa6.62□□□□□ -1.35
COL4A3-206ENST00000487633 ARID2Q68CP9 1835 aa6.62□□□□□ -1.35
COL4A3-206ENST00000487633 IGLV3-22A0A075B6J6 115 aa6.61□□□□□ -1.35
COL4A3-206ENST00000487633 BCLAF3A2AJT9 711 aaKnown RBP6.61□□□□□ -1.35
COL4A3-206ENST00000487633 MAN2B1O00754 1011 aa6.61□□□□□ -1.35
COL4A3-206ENST00000487633 EDIL3O43854 480 aa6.61□□□□□ -1.35
COL4A3-206ENST00000487633 FOXD2O60548 495 aaPredicted RBP6.61□□□□□ -1.35
COL4A3-206ENST00000487633 STBD1O95210 358 aa6.61□□□□□ -1.35
COL4A3-206ENST00000487633 CAVIN2O95810 425 aa6.61□□□□□ -1.35
COL4A3-206ENST00000487633 RXRAP19793 462 aa6.61□□□□□ -1.35
COL4A3-206ENST00000487633 BCKDHBP21953 392 aa6.61□□□□□ -1.35
COL4A3-206ENST00000487633 MLH1P40692 756 aa6.61□□□□□ -1.35
COL4A3-206ENST00000487633 SIM1P81133 766 aaPredicted RBP6.61□□□□□ -1.35
COL4A3-206ENST00000487633 SRSF1Q07955 248 aaKnown RBP eCLIP6.61□□□□□ -1.35
COL4A3-206ENST00000487633 C19orf57Q0VDD7 668 aa6.61□□□□□ -1.35
COL4A3-206ENST00000487633 CCINQ13939 588 aa6.61□□□□□ -1.35
COL4A3-206ENST00000487633 PON2Q15165 354 aa6.61□□□□□ -1.35
COL4A3-206ENST00000487633 CKAP2LQ8IYA6 745 aa6.61□□□□□ -1.35
COL4A3-206ENST00000487633 OR2I1PQ8NGU4 316 aa6.61□□□□□ -1.35
COL4A3-206ENST00000487633 SLC39A7Q92504 469 aa6.61□□□□□ -1.35
COL4A3-206ENST00000487633 ELSPBP1Q96BH3 223 aa6.61□□□□□ -1.35
COL4A3-206ENST00000487633 LOXL4Q96JB6 756 aa6.61□□□□□ -1.35
COL4A3-206ENST00000487633 CAMK1GQ96NX5 476 aa6.61□□□□□ -1.35
COL4A3-206ENST00000487633 HHIPQ96QV1 700 aa6.61□□□□□ -1.35
COL4A3-206ENST00000487633 SDF4Q9BRK5 362 aa6.61□□□□□ -1.35
COL4A3-206ENST00000487633 MKNK1Q9BUB5 465 aa6.61□□□□□ -1.35
COL4A3-206ENST00000487633 TRMT61BQ9BVS5 477 aaKnown RBP6.61□□□□□ -1.35
COL4A3-206ENST00000487633 RNF41Q9H4P4 317 aaPredicted RBP6.61□□□□□ -1.35
COL4A3-206ENST00000487633 IFT122Q9HBG6 1241 aa6.61□□□□□ -1.35
COL4A3-206ENST00000487633 FBRSL1Q9HCM7 1045 aaKnown RBP6.61□□□□□ -1.35
COL4A3-206ENST00000487633 DACT1Q9NYF0 836 aa6.61□□□□□ -1.35
COL4A3-206ENST00000487633 GTSE1Q9NYZ3 720 aa6.61□□□□□ -1.35
COL4A3-206ENST00000487633 MRPS23Q9Y3D9 190 aaKnown RBP6.61□□□□□ -1.35
COL4A3-206ENST00000487633 MGAQ8IWI9 3026 aa6.61□□□□□ -1.35
COL4A3-206ENST00000487633 USP9XQ93008 2570 aaPredicted RBP6.61□□□□□ -1.35
COL4A3-206ENST00000487633 TEP1Q99973 2627 aaKnown RBP6.6□□□□□ -1.35
COL4A3-206ENST00000487633 WDR27A2RRH5 827 aa6.6□□□□□ -1.35
COL4A3-206ENST00000487633 ARL5CA6NH57 179 aa6.6□□□□□ -1.35
COL4A3-206ENST00000487633 EIF4E1BA6NMX2 242 aaKnown RBP6.6□□□□□ -1.35
COL4A3-206ENST00000487633 MEIS1O00470 390 aa6.6□□□□□ -1.35
COL4A3-206ENST00000487633 MAFGO15525 162 aa6.6□□□□□ -1.35
COL4A3-206ENST00000487633 CCDC192P0DO97 292 aa6.6□□□□□ -1.35
COL4A3-206ENST00000487633 PCP11498 1178 aaKnown RBP6.6□□□□□ -1.35
COL4A3-206ENST00000487633 KRT10P13645 584 aa6.6□□□□□ -1.35
COL4A3-206ENST00000487633 MX1P20591 662 aa6.6□□□□□ -1.35
COL4A3-206ENST00000487633 SLC26A2P50443 739 aa6.6□□□□□ -1.35
COL4A3-206ENST00000487633 ANTXR2P58335 489 aa6.6□□□□□ -1.35
COL4A3-206ENST00000487633 TNK2Q07912 1038 aa6.6□□□□□ -1.35
COL4A3-206ENST00000487633 PPP2R5DQ14738 602 aa6.6□□□□□ -1.35
COL4A3-206ENST00000487633 TARBP2Q15633 366 aaKnown RBP6.6□□□□□ -1.35
COL4A3-206ENST00000487633 CEP55Q53EZ4 464 aa6.6□□□□□ -1.35
COL4A3-206ENST00000487633 AXDND1Q5T1B0 1012 aaPredicted RBP6.6□□□□□ -1.35
COL4A3-206ENST00000487633 STXBP5Q5T5C0 1151 aa6.6□□□□□ -1.35
COL4A3-206ENST00000487633 DAB2IPQ5VWQ8 1189 aa6.6□□□□□ -1.35
COL4A3-206ENST00000487633 RAB44Q7Z6P3 723 aaPredicted RBP6.6□□□□□ -1.35
COL4A3-206ENST00000487633 PIP4P1Q86T03 277 aa6.6□□□□□ -1.35
COL4A3-206ENST00000487633 CDR2LQ86X02 465 aaPredicted RBP6.6□□□□□ -1.35
COL4A3-206ENST00000487633 FRMD1Q8N878 549 aa6.6□□□□□ -1.35
COL4A3-206ENST00000487633 ZNF579Q8NAF0 562 aaKnown RBP6.6□□□□□ -1.35
COL4A3-206ENST00000487633 CUL5Q93034 780 aa6.6□□□□□ -1.35
COL4A3-206ENST00000487633 GPATCH3Q96I76 525 aa6.6□□□□□ -1.35
COL4A3-206ENST00000487633 SCLT1Q96NL6 688 aa6.6□□□□□ -1.35
COL4A3-206ENST00000487633 ASB16Q96NS5 453 aa6.6□□□□□ -1.35
COL4A3-206ENST00000487633 FAM193BQ96PV7 902 aaPredicted RBP6.6□□□□□ -1.35
COL4A3-206ENST00000487633 MAP7D2Q96T17 732 aa6.6□□□□□ -1.35
COL4A3-206ENST00000487633 FZD8Q9H461 694 aa6.6□□□□□ -1.35
COL4A3-206ENST00000487633 PSTPIP2Q9H939 334 aa6.6□□□□□ -1.35
COL4A3-206ENST00000487633 TMEM9BQ9NQ34 198 aa6.6□□□□□ -1.35
COL4A3-206ENST00000487633 TMEM74BQ9NUR3 256 aa6.6□□□□□ -1.35
COL4A3-206ENST00000487633 MBD1Q9UIS9 605 aaPredicted RBP6.6□□□□□ -1.35
COL4A3-206ENST00000487633 DDX19BQ9UMR2 479 aa6.6□□□□□ -1.35
COL4A3-206ENST00000487633 IPPQ9Y573 584 aa6.6□□□□□ -1.35
COL4A3-206ENST00000487633 PCDHGA5Q9Y5G8 931 aa6.6□□□□□ -1.35
COL4A3-206ENST00000487633 PIEZO2Q9H5I5 2752 aa6.6□□□□□ -1.35
COL4A3-206ENST00000487633 NUP210Q8TEM1 1887 aaPredicted RBP6.6□□□□□ -1.35
COL4A3-206ENST00000487633 GOLGA4Q13439 2230 aaKnown RBP6.6□□□□□ -1.35
COL4A3-206ENST00000487633 ATXN2Q99700 1313 aaKnown RBP6.59□□□□□ -1.35
COL4A3-206ENST00000487633 OTOL1A6NHN0 477 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms