RNA–Protein interactions for RNA: ENST00000487602.5

RBM28-206, Transcript of RNA binding motif protein 28, humanhuman

TSL 5

Gene RBM28, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-206ENST00000487602 PAWRQ96IZ0 340 aaKnown RBP8.71□□□□□ -1.02
RBM28-206ENST00000487602 ERGIC2Q96RQ1 377 aa8.71□□□□□ -1.02
RBM28-206ENST00000487602 ADPGKQ9BRR6 497 aa8.71□□□□□ -1.02
RBM28-206ENST00000487602 C11orf49Q9H6J7 331 aa8.71□□□□□ -1.02
RBM28-206ENST00000487602 CHST12Q9NRB3 414 aa8.71□□□□□ -1.02
RBM28-206ENST00000487602 AGPAT5Q9NUQ2 364 aa8.71□□□□□ -1.02
RBM28-206ENST00000487602 CPSF3Q9UKF6 684 aaKnown RBP8.71□□□□□ -1.02
RBM28-206ENST00000487602 DCDC2CA8MYV0 355 aa8.7□□□□□ -1.02
RBM28-206ENST00000487602 STX10O60499 249 aa8.7□□□□□ -1.02
RBM28-206ENST00000487602 PQBP1O60828 265 aaKnown RBP8.7□□□□□ -1.02
RBM28-206ENST00000487602 NPTXRO95502 500 aa8.7□□□□□ -1.02
RBM28-206ENST00000487602 CLTAP09496 248 aa8.7□□□□□ -1.02
RBM28-206ENST00000487602 STAG3L1P0CL83 205 aa8.7□□□□□ -1.02
RBM28-206ENST00000487602 GHRP10912 638 aa8.7□□□□□ -1.02
RBM28-206ENST00000487602 SELPP16109 830 aa8.7□□□□□ -1.02
RBM28-206ENST00000487602 GTF2H1P32780 548 aa8.7□□□□□ -1.02
RBM28-206ENST00000487602 DEKP35659 375 aaKnown RBP8.7□□□□□ -1.02
RBM28-206ENST00000487602 TNFSF9P41273 254 aa8.7□□□□□ -1.02
RBM28-206ENST00000487602 GRM5P41594 1212 aa8.7□□□□□ -1.02
RBM28-206ENST00000487602 DLG4P78352 724 aa8.7□□□□□ -1.02
RBM28-206ENST00000487602 TLE2Q04725 743 aa8.7□□□□□ -1.02
RBM28-206ENST00000487602 NFX1Q12986 1120 aaKnown RBP8.7□□□□□ -1.02
RBM28-206ENST00000487602 LPIN1Q14693 890 aa8.7□□□□□ -1.02
RBM28-206ENST00000487602 SURF1Q15526 300 aa8.7□□□□□ -1.02
RBM28-206ENST00000487602 PTPN21Q16825 1174 aa8.7□□□□□ -1.02
RBM28-206ENST00000487602 TRIM60Q495X7 471 aa8.7□□□□□ -1.02
RBM28-206ENST00000487602 SEZ6Q53EL9 994 aa8.7□□□□□ -1.02
RBM28-206ENST00000487602 DCAF17Q5H9S7 520 aaPredicted RBP8.7□□□□□ -1.02
RBM28-206ENST00000487602 UBXN11Q5T124 520 aa8.7□□□□□ -1.02
RBM28-206ENST00000487602 SLC27A1Q6PCB7 646 aa8.7□□□□□ -1.02
RBM28-206ENST00000487602 TMC6Q7Z403 805 aa8.7□□□□□ -1.02
RBM28-206ENST00000487602 NECAB2Q7Z6G3 386 aa8.7□□□□□ -1.02
RBM28-206ENST00000487602 USP37Q86T82 979 aa8.7□□□□□ -1.02
RBM28-206ENST00000487602 BRSK2Q8IWQ3 736 aa8.7□□□□□ -1.02
RBM28-206ENST00000487602 DRC7Q8IY82 874 aa8.7□□□□□ -1.02
RBM28-206ENST00000487602 FNBP1Q96RU3 617 aa8.7□□□□□ -1.02
RBM28-206ENST00000487602 OSBPL7Q9BZF2 842 aa8.7□□□□□ -1.02
RBM28-206ENST00000487602 AGO3Q9H9G7 860 aaKnown RBP8.7□□□□□ -1.02
RBM28-206ENST00000487602 RPF1Q9H9Y2 349 aaKnown RBP8.7□□□□□ -1.02
RBM28-206ENST00000487602 ERVK-5Q9HDB9 667 aa8.7□□□□□ -1.02
RBM28-206ENST00000487602 PIN4Q9Y237 131 aaKnown RBP8.7□□□□□ -1.02
RBM28-206ENST00000487602 GTPBP10A4D1E9 387 aaKnown RBP8.69□□□□□ -1.02
RBM28-206ENST00000487602 LRRIQ3A6PVS8 624 aaPredicted RBP8.69□□□□□ -1.02
RBM28-206ENST00000487602 PMM2O15305 246 aa8.69□□□□□ -1.02
RBM28-206ENST00000487602 P4HA2O15460 535 aa8.69□□□□□ -1.02
RBM28-206ENST00000487602 N4BP1O75113 896 aaKnown RBP8.69□□□□□ -1.02
RBM28-206ENST00000487602 TRIM49P0CI25 452 aa8.69□□□□□ -1.02
RBM28-206ENST00000487602 TRIM49CP0CI26 452 aa8.69□□□□□ -1.02
RBM28-206ENST00000487602 ZSCAN20P17040 1043 aaPredicted RBP8.69□□□□□ -1.02
RBM28-206ENST00000487602 CD52P31358 61 aa8.69□□□□□ -1.02
RBM28-206ENST00000487602 FMO5P49326 533 aa8.69□□□□□ -1.02
RBM28-206ENST00000487602 OSTNP61366 133 aa8.69□□□□□ -1.02
RBM28-206ENST00000487602 CLDN10P78369 228 aa8.69□□□□□ -1.02
RBM28-206ENST00000487602 PPP3CAQ08209 521 aa8.69□□□□□ -1.02
RBM28-206ENST00000487602 FAAP100Q0VG06 881 aa8.69□□□□□ -1.02
RBM28-206ENST00000487602 KCNMA1Q12791 1236 aa8.69□□□□□ -1.02
RBM28-206ENST00000487602 PAK2Q13177 524 aa8.69□□□□□ -1.02
RBM28-206ENST00000487602 DSC3Q14574 896 aa8.69□□□□□ -1.02
RBM28-206ENST00000487602 MBTPS1Q14703 1052 aa8.69□□□□□ -1.02
RBM28-206ENST00000487602 ENOX2Q16206 610 aaKnown RBP8.69□□□□□ -1.02
RBM28-206ENST00000487602 SPECC1LQ69YQ0 1117 aa8.69□□□□□ -1.02
RBM28-206ENST00000487602 LRRC8DQ7L1W4 858 aa8.69□□□□□ -1.02
RBM28-206ENST00000487602 TMEM192Q8IY95 271 aa8.69□□□□□ -1.02
RBM28-206ENST00000487602 CEP120Q8N960 986 aa8.69□□□□□ -1.02
RBM28-206ENST00000487602 SPC24Q8NBT2 197 aa8.69□□□□□ -1.02
RBM28-206ENST00000487602 CCDC127Q96BQ5 260 aa8.69□□□□□ -1.02
RBM28-206ENST00000487602 ACAP3Q96P50 834 aa8.69□□□□□ -1.02
RBM28-206ENST00000487602 POP1Q99575 1024 aaKnown RBP8.69□□□□□ -1.02
RBM28-206ENST00000487602 EIF2AQ9BY44 585 aaKnown RBP8.69□□□□□ -1.02
RBM28-206ENST00000487602 TMEM117Q9H0C3 514 aa8.69□□□□□ -1.02
RBM28-206ENST00000487602 PDE11AQ9HCR9 933 aa8.69□□□□□ -1.02
RBM28-206ENST00000487602 RBAKQ9NYW8 714 aaPredicted RBP8.69□□□□□ -1.02
RBM28-206ENST00000487602 IMPACTQ9P2X3 320 aa8.69□□□□□ -1.02
RBM28-206ENST00000487602 PADI3Q9ULW8 664 aa8.69□□□□□ -1.02
RBM28-206ENST00000487602 ATP11BQ9Y2G3 1177 aa8.69□□□□□ -1.02
RBM28-206ENST00000487602 SIK3Q9Y2K2 1263 aa8.69□□□□□ -1.02
RBM28-206ENST00000487602 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.69□□□□□ -1.029e-8■■■■□ 20.2
RBM28-206ENST00000487602 ITIH6Q6UXX5 1313 aa8.69□□□□□ -1.02
RBM28-206ENST00000487602 BRCA2P51587 3418 aa8.68□□□□□ -1.02
RBM28-206ENST00000487602 LACTBL1A8MY62 500 aa8.68□□□□□ -1.02
RBM28-206ENST00000487602 IL18RAPO95256 599 aa8.68□□□□□ -1.02
RBM28-206ENST00000487602 DLATP10515 647 aaKnown RBP8.68□□□□□ -1.02
RBM28-206ENST00000487602 TNNI1P19237 187 aa8.68□□□□□ -1.02
RBM28-206ENST00000487602 EN2P19622 333 aaPredicted RBP8.68□□□□□ -1.02
RBM28-206ENST00000487602 GCLMP48507 274 aa8.68□□□□□ -1.02
RBM28-206ENST00000487602 AP3M2P53677 418 aa8.68□□□□□ -1.02
RBM28-206ENST00000487602 WNT7BP56706 349 aa8.68□□□□□ -1.02
RBM28-206ENST00000487602 TBX2Q13207 712 aaPredicted RBP8.68□□□□□ -1.02
RBM28-206ENST00000487602 SYCP1Q15431 976 aa8.68□□□□□ -1.02
RBM28-206ENST00000487602 EXOC3L4Q17RC7 722 aa8.68□□□□□ -1.02
RBM28-206ENST00000487602 LRRC26Q2I0M4 334 aa8.68□□□□□ -1.02
RBM28-206ENST00000487602 SLC10A6Q3KNW5 377 aa8.68□□□□□ -1.02
RBM28-206ENST00000487602 KRT39Q6A163 491 aa8.68□□□□□ -1.02
RBM28-206ENST00000487602 TWF2Q6IBS0 349 aaKnown RBP8.68□□□□□ -1.02
RBM28-206ENST00000487602 GBP6Q6ZN66 633 aa8.68□□□□□ -1.02
RBM28-206ENST00000487602 FAM43BQ6ZT52 329 aaPredicted RBP8.68□□□□□ -1.02
RBM28-206ENST00000487602 CD302Q8IX05 232 aa8.68□□□□□ -1.02
RBM28-206ENST00000487602 SMG8Q8ND04 991 aaKnown RBP8.68□□□□□ -1.02
RBM28-206ENST00000487602 EHBP1Q8NDI1 1231 aa8.68□□□□□ -1.02
RBM28-206ENST00000487602 ZNF516Q92618 1163 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms