RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 CLDN3O15551 220 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 IQCF3P0C7M6 154 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 GNAT1P11488 350 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 CYP2C9P11712 490 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 ACTN1P12814 892 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 UCHL3P15374 230 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 RFX1P22670 979 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 GCLMP48507 274 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 MXI1P50539 228 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 POLR2FP61218 127 aaKnown RBP9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 POU5F1Q01860 360 aaKnown RBP9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 APBA1Q02410 837 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 PRPF4BQ13523 1007 aaKnown RBP9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 MTF1Q14872 753 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 GNASQ5JWF2 1037 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 ATF7IP2Q5U623 682 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 EEF1DP3Q658K8 133 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 CCSAPQ6IQ19 270 aaPredicted RBP9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 MPZL3Q6UWV2 235 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 RUFY4Q6ZNE9 571 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 C15orf39Q6ZRI6 1047 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 RRAGAQ7L523 313 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 SESTD1Q86VW0 696 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 BRSK2Q8IWQ3 736 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 ZNF710Q8N1W2 664 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 EHBP1Q8NDI1 1231 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 CHP1Q99653 195 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 TMEM117Q9H0C3 514 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 NLRC4Q9NPP4 1024 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 XPNPEP3Q9NQH7 507 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 ZNHIT6Q9NWK9 470 aaKnown RBP9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 MTMR10Q9NXD2 777 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 AIPL1Q9NZN9 384 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 ANKFY1Q9P2R3 1169 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 HDAC6Q9UBN7 1215 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 FHOD1Q9Y613 1164 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 SCN10AQ9Y5Y9 1956 aa9.33□□□□□ -0.92
NUDCD3-209ENST00000487118 EVPLQ92817 2033 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 TREHO43280 583 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 B4GALT5O43286 388 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 ZSCAN12O43309 604 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 GPR32O75388 356 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 PGK1P00558 417 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 ACOT2P49753 483 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 WNT7BP56706 349 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 JAM2P57087 298 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 CETN1Q12798 172 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 MAPK8IP2Q13387 824 aaPredicted RBP9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 PCBP1Q15365 356 aaKnown RBP eCLIP9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 MTFR1Q15390 333 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 SURF1Q15526 300 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 ZBTB41Q5SVQ8 909 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 SFMBT2Q5VUG0 894 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 KRT39Q6A163 491 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 IQCEQ6IPM2 695 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 TOGARAM2Q6ZUX3 1019 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 NYAP1Q6ZVC0 841 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 REXO1L1PQ8IX06 675 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 CCDC170Q8IYT3 715 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 SLAIN1Q8ND83 568 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 RAET1EQ8TD07 263 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 NLRP7Q8WX94 980 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 VTI1AQ96AJ9 217 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 CCDC127Q96BQ5 260 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 ZNF668Q96K58 619 aaPredicted RBP9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 PPP1R13BQ96KQ4 1090 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 CGRRF1Q99675 332 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 CDT1Q9H211 546 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 RBAKQ9NYW8 714 aaPredicted RBP9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 ARHGAP20Q9P2F6 1191 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 APEX2Q9UBZ4 518 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 DDX20Q9UHI6 824 aaKnown RBP9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 GTF2IRD1Q9UHL9 959 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 AJAP1Q9UKB5 411 aaPredicted RBP9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 CPSF3Q9UKF6 684 aaKnown RBP9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 PPP2R2CQ9Y2T4 447 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 ADGRG1Q9Y653 693 aa9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 EPN1Q9Y6I3 576 aaPredicted RBP9.32□□□□□ -0.92
NUDCD3-209ENST00000487118 SSU72P8A0A1W2PR75 194 aa9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 GOLGA6L9A6NEM1 432 aa9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 EIF3CLB5ME19 914 aaKnown RBP9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 TSPAN1O60635 241 aa9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 NDUFA10O95299 355 aa9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 LCA5LO95447 670 aa9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 C4BPAP04003 597 aaKnown RBP9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 SERPING1P05155 500 aa9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 CCDC175P0C221 793 aa9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 MCF2P10911 925 aa9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 DARSP14868 501 aaKnown RBP9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 ARF4P18085 180 aaPredicted RBP9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 CYLC1P35663 651 aaPredicted RBP9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 PRKCIP41743 596 aa9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 MATR3P43243 847 aaKnown RBP eCLIP9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 AP3M2P53677 418 aa9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 ZNF200P98182 395 aaPredicted RBP9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 ASIC2Q16515 512 aa9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 ASTE1Q2TB18 679 aaPredicted RBP9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 NBPF20Q3BBV1 942 aa9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 ZNF568Q3ZCX4 644 aa9.31□□□□□ -0.92
NUDCD3-209ENST00000487118 ZACNQ401N2 412 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms