RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 RECQL4O94761 1208 aa11.2□□□□□ -0.62
NEK4-204ENST00000487068 YARSP54577 528 aaKnown RBP11.2□□□□□ -0.62
NEK4-204ENST00000487068 NCKAP1LP55160 1127 aa11.2□□□□□ -0.62
NEK4-204ENST00000487068 NUCB2P80303 420 aa11.2□□□□□ -0.62
NEK4-204ENST00000487068 UBE3AQ05086 875 aa11.2□□□□□ -0.62
NEK4-204ENST00000487068 BMS1Q14692 1282 aaKnown RBP11.2□□□□□ -0.62
NEK4-204ENST00000487068 NOLC1Q14978 699 aaKnown RBP eCLIP11.2□□□□□ -0.62
NEK4-204ENST00000487068 TCEAL5Q5H9L2 206 aa11.2□□□□□ -0.62
NEK4-204ENST00000487068 NT5DC1Q5TFE4 455 aa11.2□□□□□ -0.62
NEK4-204ENST00000487068 SHC4Q6S5L8 630 aa11.2□□□□□ -0.62
NEK4-204ENST00000487068 MPZL3Q6UWV2 235 aa11.2□□□□□ -0.62
NEK4-204ENST00000487068 HAUS6Q7Z4H7 955 aa11.2□□□□□ -0.62
NEK4-204ENST00000487068 SFR1Q86XK3 245 aa11.2□□□□□ -0.62
NEK4-204ENST00000487068 CEP57L1Q8IYX8 460 aa11.2□□□□□ -0.62
NEK4-204ENST00000487068 IQUBQ8NA54 791 aa11.2□□□□□ -0.62
NEK4-204ENST00000487068 TMEM87AQ8NBN3 555 aa11.2□□□□□ -0.62
NEK4-204ENST00000487068 TMEM161BQ8NDZ6 487 aa11.2□□□□□ -0.62
NEK4-204ENST00000487068 STAMQ92783 540 aa11.2□□□□□ -0.62
NEK4-204ENST00000487068 CHAMP1Q96JM3 812 aa11.2□□□□□ -0.62
NEK4-204ENST00000487068 CCDC94Q9BW85 323 aaPredicted RBP11.2□□□□□ -0.62
NEK4-204ENST00000487068 IGFLR1Q9H665 355 aa11.2□□□□□ -0.62
NEK4-204ENST00000487068 NRDE2Q9H7Z3 1164 aa11.2□□□□□ -0.62
NEK4-204ENST00000487068 MRPL44Q9H9J2 332 aaKnown RBP11.2□□□□□ -0.62
NEK4-204ENST00000487068 TNFSF13BQ9Y275 285 aa11.2□□□□□ -0.62
NEK4-204ENST00000487068 GIT1Q9Y2X7 761 aa11.2□□□□□ -0.62
NEK4-204ENST00000487068 PRG3Q9Y2Y8 225 aaPredicted RBP11.2□□□□□ -0.62
NEK4-204ENST00000487068 MYMKA6NI61 221 aa11.19□□□□□ -0.62
NEK4-204ENST00000487068 POLR2DO15514 142 aaKnown RBP11.19□□□□□ -0.62
NEK4-204ENST00000487068 MAPTP10636 758 aaKnown RBP11.19□□□□□ -0.62
NEK4-204ENST00000487068 GAP43P17677 238 aa11.19□□□□□ -0.62
NEK4-204ENST00000487068 DNAJB1P25685 340 aa11.19□□□□□ -0.62
NEK4-204ENST00000487068 NMT1P30419 496 aaKnown RBP11.19□□□□□ -0.62
NEK4-204ENST00000487068 ABCD1P33897 745 aa11.19□□□□□ -0.62
NEK4-204ENST00000487068 SLC11A1P49279 550 aa11.19□□□□□ -0.62
NEK4-204ENST00000487068 AFF1P51825 1210 aaKnown RBP11.19□□□□□ -0.62
NEK4-204ENST00000487068 ASIC1P78348 528 aa11.19□□□□□ -0.62
NEK4-204ENST00000487068 AMPD3Q01432 767 aa11.19□□□□□ -0.62
NEK4-204ENST00000487068 GRIK3Q13003 919 aa11.19□□□□□ -0.62
NEK4-204ENST00000487068 TAS1R3Q7RTX0 852 aa11.19□□□□□ -0.62
NEK4-204ENST00000487068 TMC7Q7Z402 723 aa11.19□□□□□ -0.62
NEK4-204ENST00000487068 RBM23Q86U06 439 aaKnown RBP11.19□□□□□ -0.62
NEK4-204ENST00000487068 ZNF280BQ86YH2 543 aa11.19□□□□□ -0.62
NEK4-204ENST00000487068 CCDC65Q8IXS2 484 aa11.19□□□□□ -0.62
NEK4-204ENST00000487068 SLC39A11Q8N1S5 342 aa11.19□□□□□ -0.62
NEK4-204ENST00000487068 CEP120Q8N960 986 aa11.19□□□□□ -0.62
NEK4-204ENST00000487068 SPPL3Q8TCT6 385 aa11.19□□□□□ -0.62
NEK4-204ENST00000487068 LEO1Q8WVC0 666 aaPredicted RBP11.19□□□□□ -0.62
NEK4-204ENST00000487068 MRPS27Q92552 414 aaKnown RBP11.19□□□□□ -0.62
NEK4-204ENST00000487068 ACO2Q99798 780 aaKnown RBP11.19□□□□□ -0.62
NEK4-204ENST00000487068 TCF25Q9BQ70 676 aa11.19□□□□□ -0.62
NEK4-204ENST00000487068 PYM1Q9BRP8 204 aaKnown RBP11.19□□□□□ -0.62
NEK4-204ENST00000487068 LRRC27Q9C0I9 530 aa11.19□□□□□ -0.62
NEK4-204ENST00000487068 SCAND2PQ9GZW5 306 aaPredicted RBP11.19□□□□□ -0.62
NEK4-204ENST00000487068 CDT1Q9H211 546 aa11.19□□□□□ -0.62
NEK4-204ENST00000487068 TNMDQ9H2S6 317 aa11.19□□□□□ -0.62
NEK4-204ENST00000487068 CUEDC2Q9H467 287 aa11.19□□□□□ -0.62
NEK4-204ENST00000487068 TOPORSQ9NS56 1045 aaPredicted RBP11.19□□□□□ -0.62
NEK4-204ENST00000487068 CLDND1Q9NY35 253 aa11.19□□□□□ -0.62
NEK4-204ENST00000487068 TBC1D7Q9P0N9 293 aa11.19□□□□□ -0.62
NEK4-204ENST00000487068 FAN1Q9Y2M0 1017 aa11.19□□□□□ -0.62
NEK4-204ENST00000487068 ZDHHC9Q9Y397 364 aa11.19□□□□□ -0.62
NEK4-204ENST00000487068 PCDHGC5Q9Y5F6 944 aa11.19□□□□□ -0.62
NEK4-204ENST00000487068 ZMYM2Q9UBW7 1377 aa11.18□□□□□ -0.62
NEK4-204ENST00000487068 C2orf16Q68DN1 1984 aa11.18□□□□□ -0.62
NEK4-204ENST00000487068 GOLGA6L4A6NEF3 574 aa11.18□□□□□ -0.62
NEK4-204ENST00000487068 FAM86C2PA6NEL3 165 aa11.18□□□□□ -0.62
NEK4-204ENST00000487068 CLDN3O15551 220 aa11.18□□□□□ -0.62
NEK4-204ENST00000487068 DDHD2O94830 711 aa11.18□□□□□ -0.62
NEK4-204ENST00000487068 GCNT3O95395 438 aa11.18□□□□□ -0.62
NEK4-204ENST00000487068 MCF2P10911 925 aa11.18□□□□□ -0.62
NEK4-204ENST00000487068 IRS1P35568 1242 aa11.18□□□□□ -0.62
NEK4-204ENST00000487068 NRIP1P48552 1158 aa11.18□□□□□ -0.62
NEK4-204ENST00000487068 ZNF131P52739 623 aa11.18□□□□□ -0.62
NEK4-204ENST00000487068 HERC4Q5GLZ8 1057 aaPredicted RBP11.18□□□□□ -0.62
NEK4-204ENST00000487068 GLRA4Q5JXX5 417 aa11.18□□□□□ -0.62
NEK4-204ENST00000487068 RESP18Q5W5W9 173 aa11.18□□□□□ -0.62
NEK4-204ENST00000487068 KHSRPQ92945 711 aaKnown RBP eCLIP11.18□□□□□ -0.62
NEK4-204ENST00000487068 MAGEF1Q9HAY2 307 aa11.18□□□□□ -0.62
NEK4-204ENST00000487068 GDPD2Q9HCC8 539 aa11.18□□□□□ -0.62
NEK4-204ENST00000487068 C11orf16Q9NQ32 467 aa11.18□□□□□ -0.62
NEK4-204ENST00000487068 PANK4Q9NVE7 773 aa11.18□□□□□ -0.62
NEK4-204ENST00000487068 SEL1LQ9UBV2 794 aa11.18□□□□□ -0.62
NEK4-204ENST00000487068 TBX20Q9UMR3 447 aa11.18□□□□□ -0.62
NEK4-204ENST00000487068 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.17□□□□□ -0.62
NEK4-204ENST00000487068 A0A1B0GVL5 298 aa11.17□□□□□ -0.62
NEK4-204ENST00000487068 CASTOR2A6NHX0 329 aa11.17□□□□□ -0.62
NEK4-204ENST00000487068 NRP1O14786 923 aa11.17□□□□□ -0.62
NEK4-204ENST00000487068 B4GALT3O60512 393 aa11.17□□□□□ -0.62
NEK4-204ENST00000487068 TOM1L1O75674 476 aa11.17□□□□□ -0.62
NEK4-204ENST00000487068 ALDH2P05091 517 aa11.17□□□□□ -0.62
NEK4-204ENST00000487068 THP07101 528 aa11.17□□□□□ -0.62
NEK4-204ENST00000487068 GALTP07902 379 aa11.17□□□□□ -0.62
NEK4-204ENST00000487068 PFKFB1P16118 471 aa11.17□□□□□ -0.62
NEK4-204ENST00000487068 SCP2P22307 547 aa11.17□□□□□ -0.62
NEK4-204ENST00000487068 KCNA5P22460 613 aa11.17□□□□□ -0.62
NEK4-204ENST00000487068 GRM5P41594 1212 aa11.17□□□□□ -0.62
NEK4-204ENST00000487068 AFMP43652 599 aa11.17□□□□□ -0.62
NEK4-204ENST00000487068 NDUFV1P49821 464 aa11.17□□□□□ -0.62
NEK4-204ENST00000487068 PLCB3Q01970 1234 aa11.17□□□□□ -0.62
NEK4-204ENST00000487068 SMC1AQ14683 1233 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms