RNA–Protein interactions for RNA: ENST00000487002.1

FDPS-212, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 2,017 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-212ENST00000487002 ARL8AQ96BM9 186 aa18.23■□□□□ 0.51
FDPS-212ENST00000487002 BICD1Q96G01 975 aa18.23■□□□□ 0.51
FDPS-212ENST00000487002 GPRC5DQ9NZD1 345 aa18.23■□□□□ 0.51
FDPS-212ENST00000487002 MAFBQ9Y5Q3 323 aaPredicted RBP18.23■□□□□ 0.51
FDPS-212ENST00000487002 STYXL1Q9Y6J8 313 aa18.23■□□□□ 0.51
FDPS-212ENST00000487002 FAM187AA6NFU0 413 aa18.22■□□□□ 0.51
FDPS-212ENST00000487002 TTI1O43156 1089 aa18.22■□□□□ 0.51
FDPS-212ENST00000487002 PIGRP01833 764 aa18.22■□□□□ 0.51
FDPS-212ENST00000487002 SOX10P56693 466 aa18.22■□□□□ 0.51
FDPS-212ENST00000487002 EMC10Q5UCC4 262 aa18.22■□□□□ 0.51
FDPS-212ENST00000487002 EFCAB13Q8IY85 973 aa18.22■□□□□ 0.51
FDPS-212ENST00000487002 TRPM4Q8TD43 1214 aa18.22■□□□□ 0.51
FDPS-212ENST00000487002 ALG3Q92685 438 aa18.22■□□□□ 0.51
FDPS-212ENST00000487002 GGA3Q9NZ52 723 aa18.22■□□□□ 0.51
FDPS-212ENST00000487002 PPP1R1BQ9UD71 204 aaPredicted RBP18.22■□□□□ 0.51
FDPS-212ENST00000487002 MMEP08473 750 aa18.22■□□□□ 0.51
FDPS-212ENST00000487002 POLGP54098 1239 aaPredicted RBP18.22■□□□□ 0.51
FDPS-212ENST00000487002 SPDYCQ5MJ68 293 aa18.22■□□□□ 0.51
FDPS-212ENST00000487002 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.22■□□□□ 0.51
FDPS-212ENST00000487002 POP1Q99575 1024 aaKnown RBP18.22■□□□□ 0.51
FDPS-212ENST00000487002 CAPS2Q9BXY5 557 aa18.22■□□□□ 0.51
FDPS-212ENST00000487002 TOPORSQ9NS56 1045 aaPredicted RBP18.22■□□□□ 0.51
FDPS-212ENST00000487002 FBXO40Q9UH90 709 aa18.22■□□□□ 0.51
FDPS-212ENST00000487002 LRRC37A2A6NM11 1700 aa18.21■□□□□ 0.51
FDPS-212ENST00000487002 KRT14P02533 472 aa18.21■□□□□ 0.51
FDPS-212ENST00000487002 OATP04181 439 aa18.21■□□□□ 0.51
FDPS-212ENST00000487002 CTNNA2P26232 953 aa18.21■□□□□ 0.51
FDPS-212ENST00000487002 LIG4P49917 911 aa18.21■□□□□ 0.51
FDPS-212ENST00000487002 STRN3Q13033 797 aa18.21■□□□□ 0.51
FDPS-212ENST00000487002 PSMD6Q15008 389 aa18.21■□□□□ 0.51
FDPS-212ENST00000487002 MTERF2Q49AM1 385 aa18.21■□□□□ 0.51
FDPS-212ENST00000487002 PRAMEF18Q5VWM3 479 aa18.21■□□□□ 0.51
FDPS-212ENST00000487002 ZNF677Q86XU0 584 aa18.21■□□□□ 0.51
FDPS-212ENST00000487002 ZNF564Q8TBZ8 553 aaPredicted RBP18.21■□□□□ 0.51
FDPS-212ENST00000487002 DDX1Q92499 740 aaKnown RBP18.21■□□□□ 0.51
FDPS-212ENST00000487002 CD101Q93033 1021 aa18.21■□□□□ 0.51
FDPS-212ENST00000487002 ZNF302Q9NR11 478 aa18.21■□□□□ 0.51
FDPS-212ENST00000487002 C1orf112Q9NSG2 853 aa18.21■□□□□ 0.51
FDPS-212ENST00000487002 HMGB1P1B2RPK0 211 aaPredicted RBP18.2■□□□□ 0.5
FDPS-212ENST00000487002 DAPK3O43293 454 aa18.2■□□□□ 0.5
FDPS-212ENST00000487002 PPFIA4O75335 1185 aa18.2■□□□□ 0.5
FDPS-212ENST00000487002 DLATP10515 647 aaKnown RBP18.2■□□□□ 0.5
FDPS-212ENST00000487002 HSD17B3P37058 310 aa18.2■□□□□ 0.5
FDPS-212ENST00000487002 NAMPTP43490 491 aa18.2■□□□□ 0.5
FDPS-212ENST00000487002 DR1Q01658 176 aa18.2■□□□□ 0.5
FDPS-212ENST00000487002 SEL1L2Q5TEA6 688 aa18.2■□□□□ 0.5
FDPS-212ENST00000487002 DHX38Q92620 1227 aaKnown RBP18.2■□□□□ 0.5
FDPS-212ENST00000487002 ZNF653Q96CK0 615 aa18.2■□□□□ 0.5
FDPS-212ENST00000487002 FAM213AQ9BRX8 229 aa18.2■□□□□ 0.5
FDPS-212ENST00000487002 PORCNQ9H237 461 aa18.2■□□□□ 0.5
FDPS-212ENST00000487002 DHX33Q9H6R0 707 aaKnown RBP18.2■□□□□ 0.5
FDPS-212ENST00000487002 RASAL2Q9UJF2 1139 aa18.2■□□□□ 0.5
FDPS-212ENST00000487002 TRPC6Q9Y210 931 aa18.2■□□□□ 0.5
FDPS-212ENST00000487002 PLAAQ9Y263 795 aa18.2■□□□□ 0.5
FDPS-212ENST00000487002 OTOFQ9HC10 1997 aa18.2■□□□□ 0.5
FDPS-212ENST00000487002 PHF2O75151 1096 aa18.2■□□□□ 0.5
FDPS-212ENST00000487002 COMTP21964 271 aa18.2■□□□□ 0.5
FDPS-212ENST00000487002 CHRNA3P32297 505 aa18.2■□□□□ 0.5
FDPS-212ENST00000487002 CTNNA1P35221 906 aaKnown RBP18.2■□□□□ 0.5
FDPS-212ENST00000487002 PEX5P50542 639 aa18.2■□□□□ 0.5
FDPS-212ENST00000487002 SP4Q02446 784 aa18.2■□□□□ 0.5
FDPS-212ENST00000487002 SLFN12LQ6IEE8 588 aa18.2■□□□□ 0.5
FDPS-212ENST00000487002 ACAD10Q6JQN1 1059 aa18.2■□□□□ 0.5
FDPS-212ENST00000487002 KDM7AQ6ZMT4 941 aa18.2■□□□□ 0.5
FDPS-212ENST00000487002 PSPC1Q8WXF1 523 aaKnown RBP18.2■□□□□ 0.5
FDPS-212ENST00000487002 ATP6V1G3Q96LB4 118 aa18.2■□□□□ 0.5
FDPS-212ENST00000487002 RUNDC3BQ96NL0 473 aa18.2■□□□□ 0.5
FDPS-212ENST00000487002 NUP85Q9BW27 656 aa18.2■□□□□ 0.5
FDPS-212ENST00000487002 NIFKQ9BYG3 293 aaKnown RBP18.2■□□□□ 0.5
FDPS-212ENST00000487002 NEUROG2Q9H2A3 272 aa18.2■□□□□ 0.5
FDPS-212ENST00000487002 FZD1Q9UP38 647 aa18.2■□□□□ 0.5
FDPS-212ENST00000487002 TELO2Q9Y4R8 837 aa18.2■□□□□ 0.5
FDPS-212ENST00000487002 IGKV6D-21A0A0A0MT36 114 aa18.19■□□□□ 0.5
FDPS-212ENST00000487002 GOLGA6L10A6NI86 522 aa18.19■□□□□ 0.5
FDPS-212ENST00000487002 GBP1P32455 592 aa18.19■□□□□ 0.5
FDPS-212ENST00000487002 RFC5P40937 340 aa18.19■□□□□ 0.5
FDPS-212ENST00000487002 DRG2P55039 364 aaKnown RBP18.19■□□□□ 0.5
FDPS-212ENST00000487002 CLEC16AQ2KHT3 1053 aa18.19■□□□□ 0.5
FDPS-212ENST00000487002 DDX42Q86XP3 938 aaKnown RBP eCLIP18.19■□□□□ 0.5
FDPS-212ENST00000487002 GPC2Q8N158 579 aa18.19■□□□□ 0.5
FDPS-212ENST00000487002 SGIP1Q9BQI5 828 aa18.19■□□□□ 0.5
FDPS-212ENST00000487002 LDHAP00338 332 aaKnown RBP18.18■□□□□ 0.5
FDPS-212ENST00000487002 ARL2P36404 184 aa18.18■□□□□ 0.5
FDPS-212ENST00000487002 IRAK1P51617 712 aa18.18■□□□□ 0.5
FDPS-212ENST00000487002 BPIFB4P59827 614 aa18.18■□□□□ 0.5
FDPS-212ENST00000487002 SP2Q02086 613 aa18.18■□□□□ 0.5
FDPS-212ENST00000487002 ZNF211Q13398 564 aaPredicted RBP18.18■□□□□ 0.5
FDPS-212ENST00000487002 MESDQ14696 234 aa18.18■□□□□ 0.5
FDPS-212ENST00000487002 ZACNQ401N2 412 aa18.18■□□□□ 0.5
FDPS-212ENST00000487002 DUPD1Q68J44 220 aa18.18■□□□□ 0.5
FDPS-212ENST00000487002 LBX2Q6XYB7 198 aa18.18■□□□□ 0.5
FDPS-212ENST00000487002 TMC3Q7Z5M5 1100 aa18.18■□□□□ 0.5
FDPS-212ENST00000487002 CCDC125Q86Z20 511 aa18.18■□□□□ 0.5
FDPS-212ENST00000487002 KRT35Q92764 455 aa18.18■□□□□ 0.5
FDPS-212ENST00000487002 TRIM11Q96F44 468 aa18.18■□□□□ 0.5
FDPS-212ENST00000487002 ERP44Q9BS26 406 aa18.18■□□□□ 0.5
FDPS-212ENST00000487002 CELF4Q9BZC1 486 aaKnown RBP18.18■□□□□ 0.5
FDPS-212ENST00000487002 NR2E1Q9Y466 385 aa18.18■□□□□ 0.5
FDPS-212ENST00000487002 EIF3HO15372 352 aaKnown RBP eCLIP18.18■□□□□ 0.5
FDPS-212ENST00000487002 GRIN3BO60391 1043 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms