RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 ACP6Q9NPH0 428 aa19.34■□□□□ 0.69
PDLIM7-207ENST00000486828 CYP26B1Q9NR63 512 aa19.34■□□□□ 0.69
PDLIM7-207ENST00000486828 SEPT9Q9UHD8 586 aaPredicted RBP19.34■□□□□ 0.69
PDLIM7-207ENST00000486828 RSPH14Q9UHP6 348 aa19.34■□□□□ 0.69
PDLIM7-207ENST00000486828 RRP15Q9Y3B9 282 aaKnown RBP19.34■□□□□ 0.69
PDLIM7-207ENST00000486828 TELO2Q9Y4R8 837 aa19.34■□□□□ 0.69
PDLIM7-207ENST00000486828 NFS1Q9Y697 457 aa19.34■□□□□ 0.69
PDLIM7-207ENST00000486828 FAM187AA6NFU0 413 aa19.33■□□□□ 0.69
PDLIM7-207ENST00000486828 TMEM110-MUSTN1A8MSY1 372 aa19.33■□□□□ 0.69
PDLIM7-207ENST00000486828 TULP1O00294 542 aaPredicted RBP19.33■□□□□ 0.69
PDLIM7-207ENST00000486828 HNRNPDLO14979 420 aaKnown RBP19.33■□□□□ 0.69
PDLIM7-207ENST00000486828 COMTP21964 271 aa19.33■□□□□ 0.69
PDLIM7-207ENST00000486828 FLT3P36888 993 aa19.33■□□□□ 0.69
PDLIM7-207ENST00000486828 ACTR2P61160 394 aa19.33■□□□□ 0.69
PDLIM7-207ENST00000486828 MESDQ14696 234 aa19.33■□□□□ 0.69
PDLIM7-207ENST00000486828 SV2AQ7L0J3 742 aa19.33■□□□□ 0.69
PDLIM7-207ENST00000486828 GPC2Q8N158 579 aa19.33■□□□□ 0.69
PDLIM7-207ENST00000486828 KRT35Q92764 455 aa19.33■□□□□ 0.69
PDLIM7-207ENST00000486828 IFT74Q96LB3 600 aa19.33■□□□□ 0.69
PDLIM7-207ENST00000486828 TEX13BQ9BXU2 312 aa19.33■□□□□ 0.69
PDLIM7-207ENST00000486828 WNT8AQ9H1J5 351 aa19.33■□□□□ 0.69
PDLIM7-207ENST00000486828 DPH5Q9H2P9 285 aa19.33■□□□□ 0.69
PDLIM7-207ENST00000486828 A1CFQ9NQ94 594 aaKnown RBP19.33■□□□□ 0.69
PDLIM7-207ENST00000486828 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.33■□□□□ 0.69
PDLIM7-207ENST00000486828 ARHGAP28Q9P2N2 729 aa19.33■□□□□ 0.69
PDLIM7-207ENST00000486828 GTF3C4Q9UKN8 822 aa19.33■□□□□ 0.69
PDLIM7-207ENST00000486828 GOLGA6L10A6NI86 522 aa19.33■□□□□ 0.68
PDLIM7-207ENST00000486828 SPATA31C2B4DYI2 1134 aa19.33■□□□□ 0.68
PDLIM7-207ENST00000486828 H0YCG3 227 aa19.33■□□□□ 0.68
PDLIM7-207ENST00000486828 ATMINO43313 823 aaPredicted RBP19.33■□□□□ 0.68
PDLIM7-207ENST00000486828 ABCD1P33897 745 aa19.33■□□□□ 0.68
PDLIM7-207ENST00000486828 CTNNA1P35221 906 aaKnown RBP19.33■□□□□ 0.68
PDLIM7-207ENST00000486828 PEX5P50542 639 aa19.33■□□□□ 0.68
PDLIM7-207ENST00000486828 GNPTABQ3T906 1256 aa19.33■□□□□ 0.68
PDLIM7-207ENST00000486828 DUPD1Q68J44 220 aa19.33■□□□□ 0.68
PDLIM7-207ENST00000486828 MIS18BP1Q6P0N0 1132 aa19.33■□□□□ 0.68
PDLIM7-207ENST00000486828 CATSPERGQ6ZRH7 1159 aa19.33■□□□□ 0.68
PDLIM7-207ENST00000486828 TAS1R3Q7RTX0 852 aa19.33■□□□□ 0.68
PDLIM7-207ENST00000486828 TMC3Q7Z5M5 1100 aa19.33■□□□□ 0.68
PDLIM7-207ENST00000486828 ADAT2Q7Z6V5 191 aaKnown RBP19.33■□□□□ 0.68
PDLIM7-207ENST00000486828 ATP8B4Q8TF62 1192 aa19.33■□□□□ 0.68
PDLIM7-207ENST00000486828 CD101Q93033 1021 aa19.33■□□□□ 0.68
PDLIM7-207ENST00000486828 MAF1Q9H063 256 aa19.33■□□□□ 0.68
PDLIM7-207ENST00000486828 TRPC6Q9Y210 931 aa19.33■□□□□ 0.68
PDLIM7-207ENST00000486828 ZC3H11AO75152 810 aaKnown RBP eCLIP19.32■□□□□ 0.68
PDLIM7-207ENST00000486828 GGPS1O95749 300 aa19.32■□□□□ 0.68
PDLIM7-207ENST00000486828 NR1D1P20393 614 aa19.32■□□□□ 0.68
PDLIM7-207ENST00000486828 MARCKSL1P49006 195 aa19.32■□□□□ 0.68
PDLIM7-207ENST00000486828 SP4Q02446 784 aa19.32■□□□□ 0.68
PDLIM7-207ENST00000486828 APOBEC3FQ8IUX4 373 aaKnown RBP19.32■□□□□ 0.68
PDLIM7-207ENST00000486828 ZNF564Q8TBZ8 553 aaPredicted RBP19.32■□□□□ 0.68
PDLIM7-207ENST00000486828 DDX1Q92499 740 aaKnown RBP19.32■□□□□ 0.68
PDLIM7-207ENST00000486828 ZNF653Q96CK0 615 aa19.32■□□□□ 0.68
PDLIM7-207ENST00000486828 BICD1Q96G01 975 aa19.32■□□□□ 0.68
PDLIM7-207ENST00000486828 ERP44Q9BS26 406 aa19.32■□□□□ 0.68
PDLIM7-207ENST00000486828 NUP85Q9BW27 656 aa19.32■□□□□ 0.68
PDLIM7-207ENST00000486828 POLR3FQ9H1D9 316 aaPredicted RBP19.32■□□□□ 0.68
PDLIM7-207ENST00000486828 CHORDC1Q9UHD1 332 aaPredicted RBP19.32■□□□□ 0.68
PDLIM7-207ENST00000486828 LCMT1Q9UIC8 334 aa19.32■□□□□ 0.68
PDLIM7-207ENST00000486828 PHF2O75151 1096 aa19.31■□□□□ 0.68
PDLIM7-207ENST00000486828 MYZAPP0CAP1 466 aa19.31■□□□□ 0.68
PDLIM7-207ENST00000486828 DLATP10515 647 aaKnown RBP19.31■□□□□ 0.68
PDLIM7-207ENST00000486828 COPB2P35606 906 aa19.31■□□□□ 0.68
PDLIM7-207ENST00000486828 GCNT1Q02742 428 aa19.31■□□□□ 0.68
PDLIM7-207ENST00000486828 XKR3Q5GH77 459 aa19.31■□□□□ 0.68
PDLIM7-207ENST00000486828 AADACL2Q6P093 401 aa19.31■□□□□ 0.68
PDLIM7-207ENST00000486828 ENOSF1Q7L5Y1 443 aa19.31■□□□□ 0.68
PDLIM7-207ENST00000486828 UBLCP1Q8WVY7 318 aaPredicted RBP19.31■□□□□ 0.68
PDLIM7-207ENST00000486828 TATDN2Q93075 761 aa19.31■□□□□ 0.68
PDLIM7-207ENST00000486828 FAM213AQ9BRX8 229 aa19.31■□□□□ 0.68
PDLIM7-207ENST00000486828 UVRAGQ9P2Y5 699 aa19.31■□□□□ 0.68
PDLIM7-207ENST00000486828 FZD1Q9UP38 647 aa19.31■□□□□ 0.68
PDLIM7-207ENST00000486828 DOCK5Q9H7D0 1870 aa19.31■□□□□ 0.68
PDLIM7-207ENST00000486828 SUPT20HL2P0C7V6 817 aa19.31■□□□□ 0.68
PDLIM7-207ENST00000486828 CTNNA2P26232 953 aa19.31■□□□□ 0.68
PDLIM7-207ENST00000486828 CHRNA3P32297 505 aa19.31■□□□□ 0.68
PDLIM7-207ENST00000486828 ATP1A2P50993 1020 aa19.31■□□□□ 0.68
PDLIM7-207ENST00000486828 ZNF844Q08AG5 666 aa19.31■□□□□ 0.68
PDLIM7-207ENST00000486828 PDCLQ13371 301 aa19.31■□□□□ 0.68
PDLIM7-207ENST00000486828 SUPT20HL1Q3ZLR7 823 aa19.31■□□□□ 0.68
PDLIM7-207ENST00000486828 SEL1L2Q5TEA6 688 aa19.31■□□□□ 0.68
PDLIM7-207ENST00000486828 ANGEL2Q5VTE6 544 aaKnown RBP19.31■□□□□ 0.68
PDLIM7-207ENST00000486828 PRAMEF18Q5VWM3 479 aa19.31■□□□□ 0.68
PDLIM7-207ENST00000486828 TTC19Q6DKK2 380 aaPredicted RBP19.31■□□□□ 0.68
PDLIM7-207ENST00000486828 JAMLQ86YT9 394 aa19.31■□□□□ 0.68
PDLIM7-207ENST00000486828 FAM81BQ96LP2 452 aa19.31■□□□□ 0.68
PDLIM7-207ENST00000486828 KIAA1586Q9HCI6 787 aa19.31■□□□□ 0.68
PDLIM7-207ENST00000486828 KCNG1Q9UIX4 513 aa19.31■□□□□ 0.68
PDLIM7-207ENST00000486828 MYO1CO00159 1063 aa19.3■□□□□ 0.68
PDLIM7-207ENST00000486828 DDNO94850 711 aaPredicted RBP19.3■□□□□ 0.68
PDLIM7-207ENST00000486828 KCTD19Q17RG1 926 aaPredicted RBP19.3■□□□□ 0.68
PDLIM7-207ENST00000486828 SPDYCQ5MJ68 293 aa19.3■□□□□ 0.68
PDLIM7-207ENST00000486828 ACAD10Q6JQN1 1059 aa19.3■□□□□ 0.68
PDLIM7-207ENST00000486828 C15orf39Q6ZRI6 1047 aa19.3■□□□□ 0.68
PDLIM7-207ENST00000486828 EFCAB13Q8IY85 973 aa19.3■□□□□ 0.68
PDLIM7-207ENST00000486828 OR2W6PQ8NHA6 318 aa19.3■□□□□ 0.68
PDLIM7-207ENST00000486828 BCAS4Q8TDM0 211 aa19.3■□□□□ 0.68
PDLIM7-207ENST00000486828 DHX38Q92620 1227 aaKnown RBP19.3■□□□□ 0.68
PDLIM7-207ENST00000486828 FMO2Q99518 471 aa19.3■□□□□ 0.68
PDLIM7-207ENST00000486828 TRIM31Q9BZY9 425 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms