RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 EIF2AQ9BY44 585 aaKnown RBP13.96□□□□□ -0.17
HDAC6-229ENST00000486665 IFIH1Q9BYX4 1025 aaKnown RBP13.96□□□□□ -0.17
HDAC6-229ENST00000486665 CDT1Q9H211 546 aa13.96□□□□□ -0.17
HDAC6-229ENST00000486665 CBX8Q9HC52 389 aa13.96□□□□□ -0.17
HDAC6-229ENST00000486665 CHST12Q9NRB3 414 aa13.96□□□□□ -0.17
HDAC6-229ENST00000486665 ANKFY1Q9P2R3 1169 aa13.96□□□□□ -0.17
HDAC6-229ENST00000486665 GOLGA8IPA6NC78 632 aa13.95□□□□□ -0.18
HDAC6-229ENST00000486665 GOLGA8JA6NMD2 632 aa13.95□□□□□ -0.18
HDAC6-229ENST00000486665 N4BP3O15049 544 aa13.95□□□□□ -0.18
HDAC6-229ENST00000486665 CLDN3O15551 220 aa13.95□□□□□ -0.18
HDAC6-229ENST00000486665 PARNO95453 639 aaKnown RBP13.95□□□□□ -0.18
HDAC6-229ENST00000486665 NPTXRO95502 500 aa13.95□□□□□ -0.18
HDAC6-229ENST00000486665 HARSP12081 509 aaKnown RBP13.95□□□□□ -0.18
HDAC6-229ENST00000486665 GARTP22102 1010 aa13.95□□□□□ -0.18
HDAC6-229ENST00000486665 RFC2P35250 354 aa13.95□□□□□ -0.18
HDAC6-229ENST00000486665 MATR3P43243 847 aaKnown RBP eCLIP13.95□□□□□ -0.18
HDAC6-229ENST00000486665 ZNF165P49910 485 aa13.95□□□□□ -0.18
HDAC6-229ENST00000486665 CYP2J2P51589 502 aa13.95□□□□□ -0.18
HDAC6-229ENST00000486665 KCNQ1P51787 676 aa13.95□□□□□ -0.18
HDAC6-229ENST00000486665 LRRC63Q05C16 580 aa13.95□□□□□ -0.18
HDAC6-229ENST00000486665 MCL1Q07820 350 aa13.95□□□□□ -0.18
HDAC6-229ENST00000486665 ADAM9Q13443 819 aa13.95□□□□□ -0.18
HDAC6-229ENST00000486665 NCAPHQ15003 741 aa13.95□□□□□ -0.18
HDAC6-229ENST00000486665 NFIL3Q16649 462 aa13.95□□□□□ -0.18
HDAC6-229ENST00000486665 SEZ6Q53EL9 994 aa13.95□□□□□ -0.18
HDAC6-229ENST00000486665 ZBTB41Q5SVQ8 909 aa13.95□□□□□ -0.18
HDAC6-229ENST00000486665 SLFN12LQ6IEE8 588 aa13.95□□□□□ -0.18
HDAC6-229ENST00000486665 ARMCX5Q6P1M9 558 aa13.95□□□□□ -0.18
HDAC6-229ENST00000486665 NOTUMQ6P988 496 aa13.95□□□□□ -0.18
HDAC6-229ENST00000486665 TMCO2Q7Z6W1 182 aaPredicted RBP13.95□□□□□ -0.18
HDAC6-229ENST00000486665 DHX40Q8IX18 779 aaKnown RBP13.95□□□□□ -0.18
HDAC6-229ENST00000486665 ZC3H3Q8IXZ2 948 aaKnown RBP13.95□□□□□ -0.18
HDAC6-229ENST00000486665 AOPEPQ8N6M6 819 aa13.95□□□□□ -0.18
HDAC6-229ENST00000486665 GOLGA5Q8TBA6 731 aa13.95□□□□□ -0.18
HDAC6-229ENST00000486665 LINC01599Q8WXQ3 324 aa13.95□□□□□ -0.18
HDAC6-229ENST00000486665 SEPT8Q92599 483 aa13.95□□□□□ -0.18
HDAC6-229ENST00000486665 TSG101Q99816 390 aa13.95□□□□□ -0.18
HDAC6-229ENST00000486665 BPIFA3Q9BQP9 254 aa13.95□□□□□ -0.18
HDAC6-229ENST00000486665 ANP32EQ9BTT0 268 aa13.95□□□□□ -0.18
HDAC6-229ENST00000486665 NAT10Q9H0A0 1025 aaKnown RBP13.95□□□□□ -0.18
HDAC6-229ENST00000486665 HSPBP1Q9NZL4 362 aa13.95□□□□□ -0.18
HDAC6-229ENST00000486665 CGNQ9P2M7 1197 aaKnown RBP13.95□□□□□ -0.18
HDAC6-229ENST00000486665 MTCH2Q9Y6C9 303 aa13.95□□□□□ -0.18
HDAC6-229ENST00000486665 BICDL2A1A5D9 508 aa13.94□□□□□ -0.18
HDAC6-229ENST00000486665 ENPP3O14638 875 aa13.94□□□□□ -0.18
HDAC6-229ENST00000486665 FAM189A1O60320 539 aa13.94□□□□□ -0.18
HDAC6-229ENST00000486665 MCF2P10911 925 aa13.94□□□□□ -0.18
HDAC6-229ENST00000486665 BMP1P13497 986 aa13.94□□□□□ -0.18
HDAC6-229ENST00000486665 ZSCAN20P17040 1043 aaPredicted RBP13.94□□□□□ -0.18
HDAC6-229ENST00000486665 CASP4P49662 377 aa13.94□□□□□ -0.18
HDAC6-229ENST00000486665 EDRF1Q3B7T1 1238 aa13.94□□□□□ -0.18
HDAC6-229ENST00000486665 ZNF568Q3ZCX4 644 aa13.94□□□□□ -0.18
HDAC6-229ENST00000486665 SPATA1Q5VX52 437 aa13.94□□□□□ -0.18
HDAC6-229ENST00000486665 TWF2Q6IBS0 349 aaKnown RBP13.94□□□□□ -0.18
HDAC6-229ENST00000486665 SLC27A1Q6PCB7 646 aa13.94□□□□□ -0.18
HDAC6-229ENST00000486665 FOXR2Q6PJQ5 311 aa13.94□□□□□ -0.18
HDAC6-229ENST00000486665 CRELD2Q6UXH1 353 aaPredicted RBP13.94□□□□□ -0.18
HDAC6-229ENST00000486665 LRRC55Q6ZSA7 311 aa13.94□□□□□ -0.18
HDAC6-229ENST00000486665 SLC9A9Q8IVB4 645 aa13.94□□□□□ -0.18
HDAC6-229ENST00000486665 CEP120Q8N960 986 aa13.94□□□□□ -0.18
HDAC6-229ENST00000486665 TMEM174Q8WUU8 243 aa13.94□□□□□ -0.18
HDAC6-229ENST00000486665 SAAL1Q96ER3 474 aa13.94□□□□□ -0.18
HDAC6-229ENST00000486665 CCDC51Q96ER9 411 aa13.94□□□□□ -0.18
HDAC6-229ENST00000486665 ADAM2Q99965 735 aa13.94□□□□□ -0.18
HDAC6-229ENST00000486665 MSTO1Q9BUK6 570 aa13.94□□□□□ -0.18
HDAC6-229ENST00000486665 SRRTQ9BXP5 876 aaKnown RBP13.94□□□□□ -0.18
HDAC6-229ENST00000486665 AGO2Q9UKV8 859 aaKnown RBP13.94□□□□□ -0.18
HDAC6-229ENST00000486665 NR2F2P24468 414 aa13.93□□□□□ -0.18
HDAC6-229ENST00000486665 TNFSF9P41273 254 aa13.93□□□□□ -0.18
HDAC6-229ENST00000486665 ACOT2P49753 483 aa13.93□□□□□ -0.18
HDAC6-229ENST00000486665 FKBP3Q00688 224 aaKnown RBP13.93□□□□□ -0.18
HDAC6-229ENST00000486665 TAP1Q03518 808 aa13.93□□□□□ -0.18
HDAC6-229ENST00000486665 MYBPC2Q14324 1141 aa13.93□□□□□ -0.18
HDAC6-229ENST00000486665 NOLC1Q14978 699 aaKnown RBP eCLIP13.93□□□□□ -0.18
HDAC6-229ENST00000486665 LUZP1Q86V48 1076 aa13.93□□□□□ -0.18
HDAC6-229ENST00000486665 IRF2BP1Q8IU81 584 aa13.93□□□□□ -0.18
HDAC6-229ENST00000486665 TMEM192Q8IY95 271 aa13.93□□□□□ -0.18
HDAC6-229ENST00000486665 THNSL1Q8IYQ7 743 aa13.93□□□□□ -0.18
HDAC6-229ENST00000486665 CSGALNACT2Q8N6G5 542 aa13.93□□□□□ -0.18
HDAC6-229ENST00000486665 XXYLT1Q8NBI6 393 aa13.93□□□□□ -0.18
HDAC6-229ENST00000486665 RDH13Q8NBN7 331 aa13.93□□□□□ -0.18
HDAC6-229ENST00000486665 SMG8Q8ND04 991 aaKnown RBP13.93□□□□□ -0.18
HDAC6-229ENST00000486665 FAM213AQ9BRX8 229 aa13.93□□□□□ -0.18
HDAC6-229ENST00000486665 RBSNQ9H1K0 784 aa13.93□□□□□ -0.18
HDAC6-229ENST00000486665 HSD3B7Q9H2F3 369 aa13.93□□□□□ -0.18
HDAC6-229ENST00000486665 RNF39Q9H2S5 420 aa13.93□□□□□ -0.18
HDAC6-229ENST00000486665 RGS18Q9NS28 235 aa13.93□□□□□ -0.18
HDAC6-229ENST00000486665 SAMSN1Q9NSI8 373 aaKnown RBP13.93□□□□□ -0.18
HDAC6-229ENST00000486665 FANCLQ9NW38 375 aa13.93□□□□□ -0.18
HDAC6-229ENST00000486665 NFE2L3Q9Y4A8 694 aa13.93□□□□□ -0.18
HDAC6-229ENST00000486665 HES2Q9Y543 173 aa13.93□□□□□ -0.18
HDAC6-229ENST00000486665 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.92□□□□□ -0.18
HDAC6-229ENST00000486665 LCHNA4D1U4 455 aa13.92□□□□□ -0.18
HDAC6-229ENST00000486665 CETN3O15182 167 aa13.92□□□□□ -0.18
HDAC6-229ENST00000486665 OGTO15294 1046 aa13.92□□□□□ -0.18
HDAC6-229ENST00000486665 MEFVO15553 781 aaPredicted RBP13.92□□□□□ -0.18
HDAC6-229ENST00000486665 EXTL3O43909 919 aa13.92□□□□□ -0.18
HDAC6-229ENST00000486665 EXOC3O60645 756 aa13.92□□□□□ -0.18
HDAC6-229ENST00000486665 AKAP3O75969 853 aa13.92□□□□□ -0.18
HDAC6-229ENST00000486665 CAVIN2O95810 425 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms