RNA–Protein interactions for RNA: ENST00000486556.1

TRADD-202, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2 BASIC

Gene TRADD, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-202ENST00000486556 RCCD1A6NED2 376 aa23.41■■□□□ 1.34
TRADD-202ENST00000486556 ABLIM1O14639 778 aa23.41■■□□□ 1.34
TRADD-202ENST00000486556 ZEB2O60315 1214 aa23.41■■□□□ 1.34
TRADD-202ENST00000486556 MFAP3P55082 362 aa23.41■■□□□ 1.34
TRADD-202ENST00000486556 BMS1Q14692 1282 aaKnown RBP23.41■■□□□ 1.34
TRADD-202ENST00000486556 SURF1Q15526 300 aa23.41■■□□□ 1.34
TRADD-202ENST00000486556 ZACNQ401N2 412 aa23.41■■□□□ 1.34
TRADD-202ENST00000486556 KAT2BQ92831 832 aa23.41■■□□□ 1.34
TRADD-202ENST00000486556 SEMA4DQ92854 862 aa23.41■■□□□ 1.34
TRADD-202ENST00000486556 A0A087WZ62 844 aa23.4■■□□□ 1.34
TRADD-202ENST00000486556 A0A087X0T9 212 aa23.4■■□□□ 1.34
TRADD-202ENST00000486556 FAM189A1O60320 539 aa23.4■■□□□ 1.34
TRADD-202ENST00000486556 C4BPAP04003 597 aaKnown RBP23.4■■□□□ 1.34
TRADD-202ENST00000486556 FAM228BP0C875 321 aa23.4■■□□□ 1.34
TRADD-202ENST00000486556 TUBB2AQ13885 445 aa23.4■■□□□ 1.34
TRADD-202ENST00000486556 ARHGAP44Q17R89 818 aa23.4■■□□□ 1.34
TRADD-202ENST00000486556 KIAA0753Q2KHM9 967 aa23.4■■□□□ 1.34
TRADD-202ENST00000486556 MFSD14CQ5VZR4 134 aa23.4■■□□□ 1.34
TRADD-202ENST00000486556 ZNF410Q86VK4 478 aa23.4■■□□□ 1.34
TRADD-202ENST00000486556 GPIHBP1Q8IV16 184 aa23.4■■□□□ 1.34
TRADD-202ENST00000486556 BRSK2Q8IWQ3 736 aa23.4■■□□□ 1.34
TRADD-202ENST00000486556 KIAA0319LQ8IZA0 1049 aa23.4■■□□□ 1.34
TRADD-202ENST00000486556 TAS1R2Q8TE23 839 aa23.4■■□□□ 1.34
TRADD-202ENST00000486556 ZNF516Q92618 1163 aa23.4■■□□□ 1.34
TRADD-202ENST00000486556 NT5C1BQ96P26 610 aa23.4■■□□□ 1.34
TRADD-202ENST00000486556 FDXACB1Q9BRP7 624 aaPredicted RBP23.4■■□□□ 1.34
TRADD-202ENST00000486556 TUBB2BQ9BVA1 445 aa23.4■■□□□ 1.34
TRADD-202ENST00000486556 PDE11AQ9HCR9 933 aa23.4■■□□□ 1.34
TRADD-202ENST00000486556 TOPORSQ9NS56 1045 aaPredicted RBP23.4■■□□□ 1.34
TRADD-202ENST00000486556 CNTNAP2Q9UHC6 1331 aa23.4■■□□□ 1.34
TRADD-202ENST00000486556 EVPLQ92817 2033 aa23.4■■□□□ 1.34
TRADD-202ENST00000486556 TULP1O00294 542 aaPredicted RBP23.4■■□□□ 1.34
TRADD-202ENST00000486556 FOXN3O00409 490 aaPredicted RBP23.4■■□□□ 1.34
TRADD-202ENST00000486556 DUSP11O75319 330 aaKnown RBP23.4■■□□□ 1.34
TRADD-202ENST00000486556 URI1O94763 535 aaPredicted RBP23.4■■□□□ 1.34
TRADD-202ENST00000486556 ENOX2Q16206 610 aaKnown RBP23.4■■□□□ 1.34
TRADD-202ENST00000486556 NFRKBQ6P4R8 1299 aa23.4■■□□□ 1.34
TRADD-202ENST00000486556 ARHGEF19Q8IW93 802 aa23.4■■□□□ 1.34
TRADD-202ENST00000486556 SLC35F6Q8N357 371 aa23.4■■□□□ 1.34
TRADD-202ENST00000486556 CGRRF1Q99675 332 aa23.4■■□□□ 1.34
TRADD-202ENST00000486556 KATNAL1Q9BW62 490 aa23.4■■□□□ 1.34
TRADD-202ENST00000486556 MINDY3Q9H8M7 445 aa23.4■■□□□ 1.34
TRADD-202ENST00000486556 SETD4Q9NVD3 440 aa23.4■■□□□ 1.34
TRADD-202ENST00000486556 TRIM10Q9UDY6 481 aa23.4■■□□□ 1.34
TRADD-202ENST00000486556 CTAGE9A4FU28 777 aa23.39■■□□□ 1.33
TRADD-202ENST00000486556 HAS3O00219 553 aa23.39■■□□□ 1.33
TRADD-202ENST00000486556 MFSD10Q14728 455 aa23.39■■□□□ 1.33
TRADD-202ENST00000486556 KIF22Q14807 665 aa23.39■■□□□ 1.33
TRADD-202ENST00000486556 ENOSF1Q7L5Y1 443 aa23.39■■□□□ 1.33
TRADD-202ENST00000486556 SRGAP1Q7Z6B7 1085 aa23.39■■□□□ 1.33
TRADD-202ENST00000486556 ZBTB33Q86T24 672 aa23.39■■□□□ 1.33
TRADD-202ENST00000486556 CPSF3Q9UKF6 684 aaKnown RBP23.39■■□□□ 1.33
TRADD-202ENST00000486556 MGAMO43451 1857 aa23.39■■□□□ 1.33
TRADD-202ENST00000486556 KPNA6O60684 536 aa23.38■■□□□ 1.33
TRADD-202ENST00000486556 LRRN2O75325 713 aa23.38■■□□□ 1.33
TRADD-202ENST00000486556 VTNP04004 478 aa23.38■■□□□ 1.33
TRADD-202ENST00000486556 SMIM10L2AP0DMW4 78 aa23.38■■□□□ 1.33
TRADD-202ENST00000486556 SMIM10L2BP0DMW5 78 aa23.38■■□□□ 1.33
TRADD-202ENST00000486556 POU5F1Q01860 360 aaKnown RBP23.38■■□□□ 1.33
TRADD-202ENST00000486556 ZBTB41Q5SVQ8 909 aa23.38■■□□□ 1.33
TRADD-202ENST00000486556 RNF10Q8N5U6 811 aaKnown RBP23.38■■□□□ 1.33
TRADD-202ENST00000486556 LMBR1Q8WVP7 490 aa23.38■■□□□ 1.33
TRADD-202ENST00000486556 SECISBP2LQ93073 1101 aaKnown RBP23.38■■□□□ 1.33
TRADD-202ENST00000486556 ZNF668Q96K58 619 aaPredicted RBP23.38■■□□□ 1.33
TRADD-202ENST00000486556 CAPNS2Q96L46 248 aa23.38■■□□□ 1.33
TRADD-202ENST00000486556 TFR2Q9UP52 801 aa23.38■■□□□ 1.33
TRADD-202ENST00000486556 ATP8B3O60423 1300 aa23.38■■□□□ 1.33
TRADD-202ENST00000486556 SMIM35A0A1B0GVV1 85 aa23.38■■□□□ 1.33
TRADD-202ENST00000486556 MBLAC1A4D2B0 266 aaPredicted RBP23.38■■□□□ 1.33
TRADD-202ENST00000486556 IQCF3P0C7M6 154 aa23.38■■□□□ 1.33
TRADD-202ENST00000486556 YY1P25490 414 aa23.38■■□□□ 1.33
TRADD-202ENST00000486556 FLT3LGP49771 235 aa23.38■■□□□ 1.33
TRADD-202ENST00000486556 PSEN2P49810 448 aa23.38■■□□□ 1.33
TRADD-202ENST00000486556 NAB2Q15742 525 aa23.38■■□□□ 1.33
TRADD-202ENST00000486556 TMEM132AQ24JP5 1023 aa23.38■■□□□ 1.33
TRADD-202ENST00000486556 PPM1KQ8N3J5 372 aa23.38■■□□□ 1.33
TRADD-202ENST00000486556 HELQQ8TDG4 1101 aa23.38■■□□□ 1.33
TRADD-202ENST00000486556 NLRP7Q8WX94 980 aa23.38■■□□□ 1.33
TRADD-202ENST00000486556 ARHGAP39Q9C0H5 1083 aa23.38■■□□□ 1.33
TRADD-202ENST00000486556 CREBZFQ9NS37 354 aa23.38■■□□□ 1.33
TRADD-202ENST00000486556 NAGPAQ9UK23 515 aa23.38■■□□□ 1.33
TRADD-202ENST00000486556 HARSP12081 509 aaKnown RBP23.37■■□□□ 1.33
TRADD-202ENST00000486556 GCNT1Q02742 428 aa23.37■■□□□ 1.33
TRADD-202ENST00000486556 FSCN1Q16658 493 aaKnown RBP23.37■■□□□ 1.33
TRADD-202ENST00000486556 AMHR2Q16671 573 aa23.37■■□□□ 1.33
TRADD-202ENST00000486556 WDR44Q5JSH3 913 aa23.37■■□□□ 1.33
TRADD-202ENST00000486556 WDR49Q8IV35 697 aa23.37■■□□□ 1.33
TRADD-202ENST00000486556 NAPGQ99747 312 aaPredicted RBP23.37■■□□□ 1.33
TRADD-202ENST00000486556 GABRQQ9UN88 632 aa23.37■■□□□ 1.33
TRADD-202ENST00000486556 DUSP10Q9Y6W6 482 aa23.37■■□□□ 1.33
TRADD-202ENST00000486556 B4GALT5O43286 388 aa23.36■■□□□ 1.33
TRADD-202ENST00000486556 CTIFO43310 598 aaKnown RBP23.36■■□□□ 1.33
TRADD-202ENST00000486556 AOC2O75106 756 aa23.36■■□□□ 1.33
TRADD-202ENST00000486556 SLU7O95391 586 aaKnown RBP23.36■■□□□ 1.33
TRADD-202ENST00000486556 MYL3P08590 195 aa23.36■■□□□ 1.33
TRADD-202ENST00000486556 PNMA6AP0CW24 399 aaPredicted RBP23.36■■□□□ 1.33
TRADD-202ENST00000486556 CYBAP13498 195 aa23.36■■□□□ 1.33
TRADD-202ENST00000486556 WNT7BP56706 349 aa23.36■■□□□ 1.33
TRADD-202ENST00000486556 KYAT1Q16773 422 aa23.36■■□□□ 1.33
TRADD-202ENST00000486556 ZNF568Q3ZCX4 644 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms