RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 MRPL10Q7Z7H8 261 aaKnown RBP10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 DDX53Q86TM3 631 aaKnown RBP10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 C4orf19Q8IY42 314 aa10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 PIGOQ8TEQ8 1089 aa10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 CASP10Q92851 521 aa10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 TRIM44Q96DX7 344 aaPredicted RBP10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 B3GALT6Q96L58 329 aa10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 EIF2AK1Q9BQI3 630 aaKnown RBP10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 TRAIPQ9BWF2 469 aa10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 APOL6Q9BWW8 343 aa10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 CXCL16Q9H2A7 254 aa10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 TMEM60Q9H2L4 133 aa10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 ADAM7Q9H2U9 754 aa10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 POLD4Q9HCU8 107 aa10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 FAM86C1Q9NVL1 165 aa10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 MARCH5Q9NX47 278 aa10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 FBXO2Q9UK22 296 aaPredicted RBP10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 USP20Q9Y2K6 914 aa10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 BOLA1Q9Y3E2 137 aa10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 ZNF318Q5VUA4 2279 aa10.38□□□□□ -0.75
TMEM39A-208ENST00000486159 A0A1B0GVL5 298 aa10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 C2CD2LO14523 706 aa10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 NRP1O14786 923 aa10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 B4GALT5O43286 388 aa10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 MARCH6O60337 910 aa10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 TSPAN1O60635 241 aa10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 LILRB3O75022 631 aa10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 CNPP09543 421 aaKnown RBP10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 CTSAP10619 480 aa10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 ATP2B1P20020 1258 aa10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 MARCKSP29966 332 aaPredicted RBP10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 TXKP42681 527 aa10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 PLXNA3P51805 1871 aa10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 ATP2C1P98194 919 aaPredicted RBP10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 RNASELQ05823 741 aaKnown RBP10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 PTPN14Q15678 1187 aa10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 PTPN21Q16825 1174 aa10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 TPRNQ4KMQ1 711 aa10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 SHC4Q6S5L8 630 aa10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 GLB1LQ6UWU2 654 aa10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 BMP8AQ7Z5Y6 402 aa10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 ZNF710Q8N1W2 664 aa10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 KREMEN2Q8NCW0 462 aa10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 PSPC1Q8WXF1 523 aaKnown RBP10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 SLC7A3Q8WY07 619 aa10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 MFSD14AQ96MC6 490 aa10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 ZFP42Q96MM3 310 aa10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 KLHL5Q96PQ7 755 aa10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 GAD1Q99259 594 aa10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 TMEM121BQ9BXQ6 578 aaPredicted RBP10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 MRPL9Q9BYD2 267 aaKnown RBP10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 RSAD1Q9HA92 442 aa10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 GPRC5CQ9NQ84 441 aa10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 KIAA1468Q9P260 1216 aa10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 LIMD1Q9UGP4 676 aa10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 KCNH3Q9ULD8 1083 aa10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 PRG3Q9Y2Y8 225 aaPredicted RBP10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 IPPQ9Y573 584 aa10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 PCDHB6Q9Y5E3 794 aa10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 C2orf16Q68DN1 1984 aa10.37□□□□□ -0.75
TMEM39A-208ENST00000486159 POTEMA6NI47 508 aa10.36□□□□□ -0.75
TMEM39A-208ENST00000486159 HOXB8P17481 243 aaPredicted RBP10.36□□□□□ -0.75
TMEM39A-208ENST00000486159 AKAP5P24588 427 aa10.36□□□□□ -0.75
TMEM39A-208ENST00000486159 IGFBP6P24592 240 aaPredicted RBP10.36□□□□□ -0.75
TMEM39A-208ENST00000486159 SCNN1GP51170 649 aa10.36□□□□□ -0.75
TMEM39A-208ENST00000486159 CDC42EP1Q00587 391 aa10.36□□□□□ -0.75
TMEM39A-208ENST00000486159 SIGLEC14Q08ET2 396 aa10.36□□□□□ -0.75
TMEM39A-208ENST00000486159 CAPSQ13938 189 aa10.36□□□□□ -0.75
TMEM39A-208ENST00000486159 AMHR2Q16671 573 aa10.36□□□□□ -0.75
TMEM39A-208ENST00000486159 FAM43BQ6ZT52 329 aaPredicted RBP10.36□□□□□ -0.75
TMEM39A-208ENST00000486159 SRGAP1Q7Z6B7 1085 aa10.36□□□□□ -0.75
TMEM39A-208ENST00000486159 FBXL6Q8N531 539 aa10.36□□□□□ -0.75
TMEM39A-208ENST00000486159 ST13P5Q8NFI4 369 aaPredicted RBP10.36□□□□□ -0.75
TMEM39A-208ENST00000486159 MTRQ99707 1265 aa10.36□□□□□ -0.75
TMEM39A-208ENST00000486159 NAP1L4Q99733 375 aaKnown RBP10.36□□□□□ -0.75
TMEM39A-208ENST00000486159 HSD17B14Q9BPX1 270 aa10.36□□□□□ -0.75
TMEM39A-208ENST00000486159 BPIFA3Q9BQP9 254 aa10.36□□□□□ -0.75
TMEM39A-208ENST00000486159 INO80BQ9C086 356 aaPredicted RBP10.36□□□□□ -0.75
TMEM39A-208ENST00000486159 NXF3Q9H4D5 531 aaKnown RBP10.36□□□□□ -0.75
TMEM39A-208ENST00000486159 ZSWIM4Q9H7M6 989 aa10.36□□□□□ -0.75
TMEM39A-208ENST00000486159 KLK14Q9P0G3 267 aa10.36□□□□□ -0.75
TMEM39A-208ENST00000486159 FAN1Q9Y2M0 1017 aa10.36□□□□□ -0.75
TMEM39A-208ENST00000486159 ARL5CA6NH57 179 aa10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 INO80B-WBP1J3KQ70 363 aa10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 TBX3O15119 743 aa10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 MED24O75448 989 aa10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 ALDH2P05091 517 aa10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 EDN1P05305 212 aa10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 SPATA31D3P0C874 917 aa10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 SPATA31C1P0DKV0 1188 aa10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 GCFC2P16383 781 aaKnown RBP10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 ARF4P18085 180 aaPredicted RBP10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 GLRA2P23416 452 aa10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 AVPR2P30518 371 aa10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 ARL2P36404 184 aa10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 LONP1P36776 959 aaKnown RBP10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 MLH1P40692 756 aa10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 RFC5P40937 340 aa10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 PRPHP41219 470 aa10.35□□□□□ -0.75
TMEM39A-208ENST00000486159 ZNF165P49910 485 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms