RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 CCT2P78371 535 aaKnown RBP6.34□□□□□ -1.39
SMARCC1-207ENST00000485833 APBA1Q02410 837 aa6.34□□□□□ -1.39
SMARCC1-207ENST00000485833 VPS72Q15906 364 aa6.34□□□□□ -1.39
SMARCC1-207ENST00000485833 MST1LQ2TV78 715 aa6.34□□□□□ -1.39
SMARCC1-207ENST00000485833 COG1Q8WTW3 980 aa6.34□□□□□ -1.39
SMARCC1-207ENST00000485833 IFT122Q9HBG6 1241 aa6.34□□□□□ -1.39
SMARCC1-207ENST00000485833 SPC25Q9HBM1 224 aa6.34□□□□□ -1.39
SMARCC1-207ENST00000485833 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.34□□□□□ -1.39
SMARCC1-207ENST00000485833 REXO2Q9Y3B8 237 aaKnown RBP6.34□□□□□ -1.39
SMARCC1-207ENST00000485833 ZMYM3Q14202 1370 aa6.33□□□□□ -1.4
SMARCC1-207ENST00000485833 FAM20BO75063 409 aa6.33□□□□□ -1.4
SMARCC1-207ENST00000485833 HSP90B1P14625 803 aaKnown RBP6.33□□□□□ -1.4
SMARCC1-207ENST00000485833 MAKP20794 623 aa6.33□□□□□ -1.4
SMARCC1-207ENST00000485833 CANXP27824 592 aaKnown RBP6.33□□□□□ -1.4
SMARCC1-207ENST00000485833 GPR3P46089 330 aa6.33□□□□□ -1.4
SMARCC1-207ENST00000485833 ERVK-21P61565 698 aa6.33□□□□□ -1.4
SMARCC1-207ENST00000485833 ADRM1Q16186 407 aa6.33□□□□□ -1.4
SMARCC1-207ENST00000485833 TOR2AQ5JU69 321 aa6.33□□□□□ -1.4
SMARCC1-207ENST00000485833 GJC2Q5T442 439 aaPredicted RBP6.33□□□□□ -1.4
SMARCC1-207ENST00000485833 PDZD4Q76G19 769 aaPredicted RBP6.33□□□□□ -1.4
SMARCC1-207ENST00000485833 GPRIN1Q7Z2K8 1008 aa6.33□□□□□ -1.4
SMARCC1-207ENST00000485833 XYLT1Q86Y38 959 aa6.33□□□□□ -1.4
SMARCC1-207ENST00000485833 MDM1Q8TC05 714 aa6.33□□□□□ -1.4
SMARCC1-207ENST00000485833 RIN2Q8WYP3 895 aaPredicted RBP6.33□□□□□ -1.4
SMARCC1-207ENST00000485833 FATE1Q969F0 183 aa6.33□□□□□ -1.4
SMARCC1-207ENST00000485833 MMRN2Q9H8L6 949 aa6.33□□□□□ -1.4
SMARCC1-207ENST00000485833 SLC2A4RGQ9NR83 387 aa6.33□□□□□ -1.4
SMARCC1-207ENST00000485833 CCM2LQ9NUG4 571 aaPredicted RBP6.33□□□□□ -1.4
SMARCC1-207ENST00000485833 MCM8Q9UJA3 840 aa6.33□□□□□ -1.4
SMARCC1-207ENST00000485833 ING1Q9UK53 422 aaPredicted RBP6.33□□□□□ -1.4
SMARCC1-207ENST00000485833 CLCA2Q9UQC9 943 aa6.33□□□□□ -1.4
SMARCC1-207ENST00000485833 DISP1Q96F81 1524 aa6.33□□□□□ -1.4
SMARCC1-207ENST00000485833 UACAQ9BZF9 1416 aa6.33□□□□□ -1.4
SMARCC1-207ENST00000485833 TNIKQ9UKE5 1360 aa6.32□□□□□ -1.4
SMARCC1-207ENST00000485833 FRMPD1Q5SYB0 1578 aa6.32□□□□□ -1.4
SMARCC1-207ENST00000485833 PRR5-ARHGAP8B1AHC4 643 aa6.32□□□□□ -1.4
SMARCC1-207ENST00000485833 B5MCH6 92 aa6.32□□□□□ -1.4
SMARCC1-207ENST00000485833 K7ESF4 209 aa6.32□□□□□ -1.4
SMARCC1-207ENST00000485833 TRIM24O15164 1050 aa6.32□□□□□ -1.4
SMARCC1-207ENST00000485833 AKR1B10O60218 316 aa6.32□□□□□ -1.4
SMARCC1-207ENST00000485833 ADH4P08319 380 aa6.32□□□□□ -1.4
SMARCC1-207ENST00000485833 SRSF2Q01130 221 aaKnown RBP6.32□□□□□ -1.4
SMARCC1-207ENST00000485833 FHL2Q14192 279 aa6.32□□□□□ -1.4
SMARCC1-207ENST00000485833 ANO4Q32M45 955 aa6.32□□□□□ -1.4
SMARCC1-207ENST00000485833 AMER2Q8N7J2 671 aa6.32□□□□□ -1.4
SMARCC1-207ENST00000485833 GPR156Q8NFN8 814 aa6.32□□□□□ -1.4
SMARCC1-207ENST00000485833 SLC25A43Q8WUT9 341 aaPredicted RBP6.32□□□□□ -1.4
SMARCC1-207ENST00000485833 ACE2Q9BYF1 805 aaPredicted RBP6.32□□□□□ -1.4
SMARCC1-207ENST00000485833 DNAJC28Q9NX36 388 aa6.32□□□□□ -1.4
SMARCC1-207ENST00000485833 SCOCQ9UIL1 159 aa6.32□□□□□ -1.4
SMARCC1-207ENST00000485833 SORCS3Q9UPU3 1222 aa6.32□□□□□ -1.4
SMARCC1-207ENST00000485833 PHLDB1Q86UU1 1377 aa6.31□□□□□ -1.4
SMARCC1-207ENST00000485833 WASHC2AQ641Q2 1341 aa6.31□□□□□ -1.4
SMARCC1-207ENST00000485833 MAGI3Q5TCQ9 1506 aa6.31□□□□□ -1.4
SMARCC1-207ENST00000485833 CFAP43Q8NDM7 1665 aa6.31□□□□□ -1.4
SMARCC1-207ENST00000485833 WDR7Q9Y4E6 1490 aa6.31□□□□□ -1.4
SMARCC1-207ENST00000485833 PTGS2P35354 604 aa6.31□□□□□ -1.4
SMARCC1-207ENST00000485833 HMGA2P52926 109 aa6.31□□□□□ -1.4
SMARCC1-207ENST00000485833 MUM1L1Q5H9M0 696 aa6.31□□□□□ -1.4
SMARCC1-207ENST00000485833 PRAMEF14Q5SWL7 426 aa6.31□□□□□ -1.4
SMARCC1-207ENST00000485833 RNF187Q5TA31 235 aaPredicted RBP6.31□□□□□ -1.4
SMARCC1-207ENST00000485833 ZNF276Q8N554 614 aa6.31□□□□□ -1.4
SMARCC1-207ENST00000485833 NEU4Q8WWR8 484 aaPredicted RBP6.31□□□□□ -1.4
SMARCC1-207ENST00000485833 CLIP3Q96DZ5 547 aa6.31□□□□□ -1.4
SMARCC1-207ENST00000485833 CEP95Q96GE4 821 aa6.31□□□□□ -1.4
SMARCC1-207ENST00000485833 MRIQ9BWK5 157 aa6.31□□□□□ -1.4
SMARCC1-207ENST00000485833 GREM2Q9H772 168 aa6.31□□□□□ -1.4
SMARCC1-207ENST00000485833 GPRC5BQ9NZH0 403 aa6.31□□□□□ -1.4
SMARCC1-207ENST00000485833 ADCY6O43306 1168 aa6.3□□□□□ -1.4
SMARCC1-207ENST00000485833 RPS6KA4O75676 772 aa6.3□□□□□ -1.4
SMARCC1-207ENST00000485833 RECQL4O94761 1208 aa6.3□□□□□ -1.4
SMARCC1-207ENST00000485833 ECHS1P30084 290 aa6.3□□□□□ -1.4
SMARCC1-207ENST00000485833 ADSLP30566 484 aaPredicted RBP6.3□□□□□ -1.4
SMARCC1-207ENST00000485833 MTNR1BP49286 362 aa6.3□□□□□ -1.4
SMARCC1-207ENST00000485833 FLT3LGP49771 235 aa6.3□□□□□ -1.4
SMARCC1-207ENST00000485833 SLC5A3P53794 718 aa6.3□□□□□ -1.4
SMARCC1-207ENST00000485833 MBNL2Q5VZF2 373 aaKnown RBP6.3□□□□□ -1.4
SMARCC1-207ENST00000485833 DRICH1Q6PGQ1 229 aaPredicted RBP6.3□□□□□ -1.4
SMARCC1-207ENST00000485833 FAM180AQ6UWF9 173 aa6.3□□□□□ -1.4
SMARCC1-207ENST00000485833 DDX42Q86XP3 938 aaKnown RBP eCLIP6.3□□□□□ -1.4
SMARCC1-207ENST00000485833 OR7D4Q8NG98 312 aa6.3□□□□□ -1.4
SMARCC1-207ENST00000485833 CPT1CQ8TCG5 803 aa6.3□□□□□ -1.4
SMARCC1-207ENST00000485833 NDC1Q9BTX1 674 aa6.3□□□□□ -1.4
SMARCC1-207ENST00000485833 TRIM8Q9BZR9 551 aa6.3□□□□□ -1.4
SMARCC1-207ENST00000485833 NRDE2Q9H7Z3 1164 aa6.3□□□□□ -1.4
SMARCC1-207ENST00000485833 BCO1Q9HAY6 547 aa6.3□□□□□ -1.4
SMARCC1-207ENST00000485833 SPON1Q9HCB6 807 aa6.3□□□□□ -1.4
SMARCC1-207ENST00000485833 RBM12Q9NTZ6 932 aaKnown RBP6.3□□□□□ -1.4
SMARCC1-207ENST00000485833 EIF2B4Q9UI10 523 aaKnown RBP6.3□□□□□ -1.4
SMARCC1-207ENST00000485833 ZBTB21Q9ULJ3 1066 aa6.3□□□□□ -1.4
SMARCC1-207ENST00000485833 CD109Q6YHK3 1445 aa6.3□□□□□ -1.4
SMARCC1-207ENST00000485833 STRCQ7RTU9 1775 aa6.29□□□□□ -1.4
SMARCC1-207ENST00000485833 SCAF4O95104 1147 aaKnown RBP6.29□□□□□ -1.4
SMARCC1-207ENST00000485833 OSMP13725 252 aa6.29□□□□□ -1.4
SMARCC1-207ENST00000485833 APOBEC3AP31941 199 aaPredicted RBP6.29□□□□□ -1.4
SMARCC1-207ENST00000485833 MALLQ13021 153 aa6.29□□□□□ -1.4
SMARCC1-207ENST00000485833 KLF1Q13351 362 aaPredicted RBP6.29□□□□□ -1.4
SMARCC1-207ENST00000485833 IQGAP2Q13576 1575 aa6.29□□□□□ -1.4
SMARCC1-207ENST00000485833 MFSD14BQ5SR56 506 aa6.29□□□□□ -1.4
SMARCC1-207ENST00000485833 ANKS6Q68DC2 871 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms