RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 TTC3P53804 2025 aa9.03□□□□□ -0.96
SF3A1-208ENST00000485618 ADGRA3Q8IWK6 1321 aa9.03□□□□□ -0.96
SF3A1-208ENST00000485618 A0A0B4J269 797 aa9.02□□□□□ -0.97
SF3A1-208ENST00000485618 PSMA7O14818 248 aa9.02□□□□□ -0.97
SF3A1-208ENST00000485618 OGTO15294 1046 aa9.02□□□□□ -0.97
SF3A1-208ENST00000485618 PRPF6O94906 941 aaKnown RBP9.02□□□□□ -0.97
SF3A1-208ENST00000485618 ARHGEF15O94989 841 aa9.02□□□□□ -0.97
SF3A1-208ENST00000485618 FGFR1OPO95684 399 aaKnown RBP9.02□□□□□ -0.97
SF3A1-208ENST00000485618 ALDH2P05091 517 aa9.02□□□□□ -0.97
SF3A1-208ENST00000485618 BMP1P13497 986 aa9.02□□□□□ -0.97
SF3A1-208ENST00000485618 LAG3P18627 525 aa9.02□□□□□ -0.97
SF3A1-208ENST00000485618 PROZP22891 400 aa9.02□□□□□ -0.97
SF3A1-208ENST00000485618 PPM1AP35813 382 aa9.02□□□□□ -0.97
SF3A1-208ENST00000485618 GRM5P41594 1212 aa9.02□□□□□ -0.97
SF3A1-208ENST00000485618 TAP1Q03518 808 aa9.02□□□□□ -0.97
SF3A1-208ENST00000485618 KRT17Q04695 432 aa9.02□□□□□ -0.97
SF3A1-208ENST00000485618 PNOCQ13519 176 aa9.02□□□□□ -0.97
SF3A1-208ENST00000485618 MYBPC2Q14324 1141 aa9.02□□□□□ -0.97
SF3A1-208ENST00000485618 SKOR2Q2VWA4 1001 aaPredicted RBP9.02□□□□□ -0.97
SF3A1-208ENST00000485618 ZC2HC1CQ53FD0 456 aaPredicted RBP9.02□□□□□ -0.97
SF3A1-208ENST00000485618 ZNF658Q5TYW1 1059 aaPredicted RBP9.02□□□□□ -0.97
SF3A1-208ENST00000485618 ZNF598Q86UK7 904 aaKnown RBP9.02□□□□□ -0.97
SF3A1-208ENST00000485618 LINC01599Q8WXQ3 324 aa9.02□□□□□ -0.97
SF3A1-208ENST00000485618 TGS1Q96RS0 853 aaKnown RBP9.02□□□□□ -0.97
SF3A1-208ENST00000485618 TSG101Q99816 390 aa9.02□□□□□ -0.97
SF3A1-208ENST00000485618 APOL6Q9BWW8 343 aa9.02□□□□□ -0.97
SF3A1-208ENST00000485618 STRA6Q9BX79 667 aa9.02□□□□□ -0.97
SF3A1-208ENST00000485618 PLVAPQ9BX97 442 aa9.02□□□□□ -0.97
SF3A1-208ENST00000485618 OSBPL7Q9BZF2 842 aa9.02□□□□□ -0.97
SF3A1-208ENST00000485618 NUP62CLQ9H1M0 184 aa9.02□□□□□ -0.97
SF3A1-208ENST00000485618 RPF1Q9H9Y2 349 aaKnown RBP9.02□□□□□ -0.97
SF3A1-208ENST00000485618 PTPRHQ9HD43 1115 aa9.02□□□□□ -0.97
SF3A1-208ENST00000485618 LMBRD1Q9NUN5 540 aa9.02□□□□□ -0.97
SF3A1-208ENST00000485618 PUF60Q9UHX1 559 aaKnown RBP9.02□□□□□ -0.97
SF3A1-208ENST00000485618 DACH1Q9UI36 760 aa9.02□□□□□ -0.97
SF3A1-208ENST00000485618 AGO2Q9UKV8 859 aaKnown RBP9.02□□□□□ -0.97
SF3A1-208ENST00000485618 PCDHA5Q9Y5H7 936 aa9.02□□□□□ -0.97
SF3A1-208ENST00000485618 ARL5CA6NH57 179 aa9.01□□□□□ -0.97
SF3A1-208ENST00000485618 ZNF233A6NK53 670 aa9.01□□□□□ -0.97
SF3A1-208ENST00000485618 KLRC4O43908 158 aa9.01□□□□□ -0.97
SF3A1-208ENST00000485618 OFD1O75665 1012 aa9.01□□□□□ -0.97
SF3A1-208ENST00000485618 PPP1R37O75864 691 aa9.01□□□□□ -0.97
SF3A1-208ENST00000485618 LETM1O95202 739 aaPredicted RBP9.01□□□□□ -0.97
SF3A1-208ENST00000485618 IL18RAPO95256 599 aa9.01□□□□□ -0.97
SF3A1-208ENST00000485618 THP07101 528 aa9.01□□□□□ -0.97
SF3A1-208ENST00000485618 MYBP10242 640 aa9.01□□□□□ -0.97
SF3A1-208ENST00000485618 HARSP12081 509 aaKnown RBP9.01□□□□□ -0.97
SF3A1-208ENST00000485618 PAX3P23760 479 aa9.01□□□□□ -0.97
SF3A1-208ENST00000485618 MCM4P33991 863 aa9.01□□□□□ -0.97
SF3A1-208ENST00000485618 EHHADHQ08426 723 aa9.01□□□□□ -0.97
SF3A1-208ENST00000485618 STK4Q13043 487 aa9.01□□□□□ -0.97
SF3A1-208ENST00000485618 SURF1Q15526 300 aa9.01□□□□□ -0.97
SF3A1-208ENST00000485618 BMT2Q1RMZ1 405 aa9.01□□□□□ -0.97
SF3A1-208ENST00000485618 TCTN1Q2MV58 587 aa9.01□□□□□ -0.97
SF3A1-208ENST00000485618 UBXN11Q5T124 520 aa9.01□□□□□ -0.97
SF3A1-208ENST00000485618 ARMCX5Q6P1M9 558 aa9.01□□□□□ -0.97
SF3A1-208ENST00000485618 EPM2AIP1Q7L775 607 aaPredicted RBP9.01□□□□□ -0.97
SF3A1-208ENST00000485618 MICAL3Q7RTP6 2002 aa9.01□□□□□ -0.97
SF3A1-208ENST00000485618 THNSL1Q8IYQ7 743 aa9.01□□□□□ -0.97
SF3A1-208ENST00000485618 CRIPAKQ8N1N5 446 aa9.01□□□□□ -0.97
SF3A1-208ENST00000485618 GUF1Q8N442 669 aaKnown RBP9.01□□□□□ -0.97
SF3A1-208ENST00000485618 SP7Q8TDD2 431 aaPredicted RBP9.01□□□□□ -0.97
SF3A1-208ENST00000485618 HELQQ8TDG4 1101 aa9.01□□□□□ -0.97
SF3A1-208ENST00000485618 CACTINQ8WUQ7 758 aaKnown RBP9.01□□□□□ -0.97
SF3A1-208ENST00000485618 SCFD1Q8WVM8 642 aa9.01□□□□□ -0.97
SF3A1-208ENST00000485618 ZNF689Q96CS4 500 aaPredicted RBP9.01□□□□□ -0.97
SF3A1-208ENST00000485618 DDX27Q96GQ7 796 aaKnown RBP9.01□□□□□ -0.97
SF3A1-208ENST00000485618 DHTKD1Q96HY7 919 aaPredicted RBP9.01□□□□□ -0.97
SF3A1-208ENST00000485618 SNX27Q96L92 541 aa9.01□□□□□ -0.97
SF3A1-208ENST00000485618 FIZ1Q96SL8 496 aa9.01□□□□□ -0.97
SF3A1-208ENST00000485618 C11orf84Q9BUA3 381 aaPredicted RBP9.01□□□□□ -0.97
SF3A1-208ENST00000485618 EIF2AQ9BY44 585 aaKnown RBP9.01□□□□□ -0.97
SF3A1-208ENST00000485618 CDT1Q9H211 546 aa9.01□□□□□ -0.97
SF3A1-208ENST00000485618 CLSTN2Q9H4D0 955 aa9.01□□□□□ -0.97
SF3A1-208ENST00000485618 TYW1Q9NV66 732 aaKnown RBP9.01□□□□□ -0.97
SF3A1-208ENST00000485618 KIAA1468Q9P260 1216 aa9.01□□□□□ -0.97
SF3A1-208ENST00000485618 COG5Q9UP83 839 aa9.01□□□□□ -0.97
SF3A1-208ENST00000485618 INPP5FQ9Y2H2 1132 aa9.01□□□□□ -0.97
SF3A1-208ENST00000485618 FRMD4BQ9Y2L6 1034 aa9.01□□□□□ -0.97
SF3A1-208ENST00000485618 STYXL1Q9Y6J8 313 aa9.01□□□□□ -0.97
SF3A1-208ENST00000485618 BICDL2A1A5D9 508 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 TULP1O00294 542 aaPredicted RBP9□□□□□ -0.97
SF3A1-208ENST00000485618 PDXKO00764 312 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 EXTL3O43909 919 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 LPXNO60711 386 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 FGFR1P11362 822 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 POU3F3P20264 500 aaPredicted RBP9□□□□□ -0.97
SF3A1-208ENST00000485618 AKAP5P24588 427 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 CASP1P29466 404 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 ERVK-21P61565 698 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 PPP2R3AQ06190 1150 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 GRIK3Q13003 919 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 CAMK4Q16566 473 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 PTPROQ16827 1216 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 PAN2Q504Q3 1202 aaKnown RBP9□□□□□ -0.97
SF3A1-208ENST00000485618 COBLL1Q53SF7 1204 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 CT47A1Q5JQC4 288 aaPredicted RBP9□□□□□ -0.97
SF3A1-208ENST00000485618 AGMOQ6ZNB7 445 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 TAS1R3Q7RTX0 852 aa9□□□□□ -0.97
SF3A1-208ENST00000485618 SPRED2Q7Z698 418 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms