RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 USP20Q9Y2K6 914 aa28.36■■■□□ 2.13
HLA-F-227ENST00000485513 PCDHB6Q9Y5E3 794 aa28.36■■■□□ 2.13
HLA-F-227ENST00000485513 TADA2AO75478 443 aa28.35■■■□□ 2.13
HLA-F-227ENST00000485513 TUSC3Q13454 348 aa28.35■■■□□ 2.13
HLA-F-227ENST00000485513 OTOP3Q7RTS5 596 aa28.35■■■□□ 2.13
HLA-F-227ENST00000485513 GPR65Q8IYL9 337 aa28.35■■■□□ 2.13
HLA-F-227ENST00000485513 IGSF22Q8N9C0 903 aa28.35■■■□□ 2.13
HLA-F-227ENST00000485513 PRSS33Q8NF86 280 aa28.35■■■□□ 2.13
HLA-F-227ENST00000485513 SNX29Q8TEQ0 813 aa28.35■■■□□ 2.13
HLA-F-227ENST00000485513 KIFAP3Q92845 792 aa28.35■■■□□ 2.13
HLA-F-227ENST00000485513 KIFC3Q9BVG8 833 aa28.35■■■□□ 2.13
HLA-F-227ENST00000485513 POLD4Q9HCU8 107 aa28.35■■■□□ 2.13
HLA-F-227ENST00000485513 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP28.35■■■□□ 2.13
HLA-F-227ENST00000485513 DDX19AQ9NUU7 478 aaKnown RBP28.35■■■□□ 2.13
HLA-F-227ENST00000485513 CACNG4Q9UBN1 327 aa28.35■■■□□ 2.13
HLA-F-227ENST00000485513 RECQL4O94761 1208 aa28.34■■■□□ 2.13
HLA-F-227ENST00000485513 EFNA5P52803 228 aa28.34■■■□□ 2.13
HLA-F-227ENST00000485513 HSP90AA2PQ14568 343 aaPredicted RBP28.34■■■□□ 2.13
HLA-F-227ENST00000485513 CCDC195A0A1B0GUA6 201 aa28.33■■■□□ 2.13
HLA-F-227ENST00000485513 PTGESO14684 152 aa28.33■■■□□ 2.13
HLA-F-227ENST00000485513 EDN1P05305 212 aa28.33■■■□□ 2.13
HLA-F-227ENST00000485513 THP07101 528 aa28.33■■■□□ 2.13
HLA-F-227ENST00000485513 MYBP10242 640 aa28.33■■■□□ 2.13
HLA-F-227ENST00000485513 VCPP55072 806 aaKnown RBP28.33■■■□□ 2.13
HLA-F-227ENST00000485513 RABEP1Q15276 862 aa28.33■■■□□ 2.13
HLA-F-227ENST00000485513 EEF1DP3Q658K8 133 aa28.33■■■□□ 2.13
HLA-F-227ENST00000485513 RIN2Q8WYP3 895 aaPredicted RBP28.33■■■□□ 2.13
HLA-F-227ENST00000485513 PAAF1Q9BRP4 392 aa28.33■■■□□ 2.13
HLA-F-227ENST00000485513 SMOC2Q9H3U7 446 aa28.33■■■□□ 2.13
HLA-F-227ENST00000485513 FNIP2Q9P278 1114 aa28.33■■■□□ 2.13
HLA-F-227ENST00000485513 KIF3AQ9Y496 699 aa28.33■■■□□ 2.13
HLA-F-227ENST00000485513 SF3B1O75533 1304 aaKnown RBP eCLIP28.33■■■□□ 2.13
HLA-F-227ENST00000485513 CASTOR2A6NHX0 329 aa28.32■■■□□ 2.12
HLA-F-227ENST00000485513 LAD1O00515 517 aa28.32■■■□□ 2.12
HLA-F-227ENST00000485513 PDGFBP01127 241 aaPredicted RBP28.32■■■□□ 2.12
HLA-F-227ENST00000485513 AVPR2P30518 371 aa28.32■■■□□ 2.12
HLA-F-227ENST00000485513 PTPN5P54829 565 aa28.32■■■□□ 2.12
HLA-F-227ENST00000485513 CREMQ03060 361 aa28.32■■■□□ 2.12
HLA-F-227ENST00000485513 DCAF4L1Q3SXM0 396 aa28.32■■■□□ 2.12
HLA-F-227ENST00000485513 CYP26C1Q6V0L0 522 aa28.32■■■□□ 2.12
HLA-F-227ENST00000485513 PALB2Q86YC2 1186 aa28.32■■■□□ 2.12
HLA-F-227ENST00000485513 HDAC7Q8WUI4 952 aa28.32■■■□□ 2.12
HLA-F-227ENST00000485513 MTCL1Q9Y4B5 1905 aaKnown RBP28.31■■■□□ 2.12
HLA-F-227ENST00000485513 C1RP00736 705 aa28.31■■■□□ 2.12
HLA-F-227ENST00000485513 SPATA31D3P0C874 917 aa28.31■■■□□ 2.12
HLA-F-227ENST00000485513 MRE11P49959 708 aa28.31■■■□□ 2.12
HLA-F-227ENST00000485513 KRT79Q5XKE5 535 aa28.31■■■□□ 2.12
HLA-F-227ENST00000485513 SPATA31D4Q6ZUB0 917 aa28.31■■■□□ 2.12
HLA-F-227ENST00000485513 GLYCTKQ8IVS8 523 aa28.31■■■□□ 2.12
HLA-F-227ENST00000485513 HASPINQ8TF76 798 aa28.31■■■□□ 2.12
HLA-F-227ENST00000485513 RHOBTB2Q9BYZ6 727 aa28.31■■■□□ 2.12
HLA-F-227ENST00000485513 PLEKHA4Q9H4M7 779 aa28.31■■■□□ 2.12
HLA-F-227ENST00000485513 DAXXQ9UER7 740 aaPredicted RBP28.31■■■□□ 2.12
HLA-F-227ENST00000485513 DNM3Q9UQ16 869 aa28.31■■■□□ 2.12
HLA-F-227ENST00000485513 ST18O60284 1047 aa28.3■■■□□ 2.12
HLA-F-227ENST00000485513 RFPL2O75678 378 aa28.3■■■□□ 2.12
HLA-F-227ENST00000485513 PRPHP41219 470 aa28.3■■■□□ 2.12
HLA-F-227ENST00000485513 NT5DC1Q5TFE4 455 aa28.3■■■□□ 2.12
HLA-F-227ENST00000485513 ATF7IP2Q5U623 682 aa28.3■■■□□ 2.12
HLA-F-227ENST00000485513 CXCL16Q9H2A7 254 aa28.3■■■□□ 2.12
HLA-F-227ENST00000485513 GDAQ9Y2T3 454 aa28.3■■■□□ 2.12
HLA-F-227ENST00000485513 PP2D1A8MPX8 630 aa28.29■■■□□ 2.12
HLA-F-227ENST00000485513 E9PMD0 336 aa28.29■■■□□ 2.12
HLA-F-227ENST00000485513 K7ERI5 159 aa28.29■■■□□ 2.12
HLA-F-227ENST00000485513 TGM5O43548 720 aa28.29■■■□□ 2.12
HLA-F-227ENST00000485513 KIF4AO95239 1232 aa28.29■■■□□ 2.12
HLA-F-227ENST00000485513 RPL17P18621 184 aaKnown RBP28.29■■■□□ 2.12
HLA-F-227ENST00000485513 MCTP1Q6DN14 999 aa28.29■■■□□ 2.12
HLA-F-227ENST00000485513 DTHD1Q6ZMT9 781 aa28.29■■■□□ 2.12
HLA-F-227ENST00000485513 SMG7Q92540 1137 aaKnown RBP28.29■■■□□ 2.12
HLA-F-227ENST00000485513 WDR6Q9NNW5 1121 aaKnown RBP28.29■■■□□ 2.12
HLA-F-227ENST00000485513 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.29■■■□□ 2.12
HLA-F-227ENST00000485513 NAB2Q15742 525 aa28.28■■■□□ 2.12
HLA-F-227ENST00000485513 IL17AQ16552 155 aa28.28■■■□□ 2.12
HLA-F-227ENST00000485513 RTP2Q5QGT7 225 aa28.28■■■□□ 2.12
HLA-F-227ENST00000485513 LILRA6Q6PI73 481 aa28.28■■■□□ 2.12
HLA-F-227ENST00000485513 PRSS55Q6UWB4 352 aaPredicted RBP28.28■■■□□ 2.12
HLA-F-227ENST00000485513 APBB1IPQ7Z5R6 666 aaPredicted RBP28.28■■■□□ 2.12
HLA-F-227ENST00000485513 TTPALQ9BTX7 342 aa28.28■■■□□ 2.12
HLA-F-227ENST00000485513 CLUHO75153 1309 aa28.27■■■□□ 2.12
HLA-F-227ENST00000485513 CCDC169A6NNP5 214 aa28.27■■■□□ 2.12
HLA-F-227ENST00000485513 CDC25AP30304 524 aa28.27■■■□□ 2.12
HLA-F-227ENST00000485513 PEX3P56589 373 aa28.27■■■□□ 2.12
HLA-F-227ENST00000485513 TCF15Q12870 199 aa28.27■■■□□ 2.12
HLA-F-227ENST00000485513 FAM171A1Q5VUB5 890 aa28.27■■■□□ 2.12
HLA-F-227ENST00000485513 STAMQ92783 540 aa28.27■■■□□ 2.12
HLA-F-227ENST00000485513 ZNF707Q96C28 371 aaPredicted RBP28.27■■■□□ 2.12
HLA-F-227ENST00000485513 ZDHHC7Q9NXF8 308 aa28.27■■■□□ 2.12
HLA-F-227ENST00000485513 PHLPP2Q6ZVD8 1323 aa28.26■■■□□ 2.11
HLA-F-227ENST00000485513 HIP1RO75146 1068 aa28.26■■■□□ 2.11
HLA-F-227ENST00000485513 PAPLNO95428 1278 aa28.26■■■□□ 2.11
HLA-F-227ENST00000485513 NPTX2P47972 431 aa28.26■■■□□ 2.11
HLA-F-227ENST00000485513 RILPL1Q5EBL4 403 aa28.26■■■□□ 2.11
HLA-F-227ENST00000485513 CEP57Q86XR8 500 aa28.26■■■□□ 2.11
HLA-F-227ENST00000485513 DAW1Q8N136 415 aa28.26■■■□□ 2.11
HLA-F-227ENST00000485513 PIK3R5Q8WYR1 880 aa28.26■■■□□ 2.11
HLA-F-227ENST00000485513 MMTAG2Q9BU76 263 aaKnown RBP28.26■■■□□ 2.11
HLA-F-227ENST00000485513 NT5C3AQ9H0P0 336 aa28.26■■■□□ 2.11
HLA-F-227ENST00000485513 KCNK12Q9HB15 430 aa28.26■■■□□ 2.11
HLA-F-227ENST00000485513 PIDD1Q9HB75 910 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms