RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 ZNF233A6NK53 670 aa19.14■□□□□ 0.65
CHMP3-207ENST00000485465 SLC16A3O15427 465 aaKnown RBP19.14■□□□□ 0.65
CHMP3-207ENST00000485465 CLTAP09496 248 aa19.14■□□□□ 0.65
CHMP3-207ENST00000485465 PSMC2P35998 433 aaKnown RBP19.14■□□□□ 0.65
CHMP3-207ENST00000485465 TNFSF9P41273 254 aa19.14■□□□□ 0.65
CHMP3-207ENST00000485465 OSTNP61366 133 aa19.14■□□□□ 0.65
CHMP3-207ENST00000485465 SNRNP35Q16560 246 aaKnown RBP19.14■□□□□ 0.65
CHMP3-207ENST00000485465 C16orf59Q7L2K0 433 aa19.14■□□□□ 0.65
CHMP3-207ENST00000485465 ECHDC2Q86YB7 292 aa19.14■□□□□ 0.65
CHMP3-207ENST00000485465 IRF2BP1Q8IU81 584 aa19.14■□□□□ 0.65
CHMP3-207ENST00000485465 CBWD2Q8IUF1 395 aa19.14■□□□□ 0.65
CHMP3-207ENST00000485465 MKNK1Q9BUB5 465 aa19.14■□□□□ 0.65
CHMP3-207ENST00000485465 CCDC94Q9BW85 323 aaPredicted RBP19.14■□□□□ 0.65
CHMP3-207ENST00000485465 SAMSN1Q9NSI8 373 aaKnown RBP19.14■□□□□ 0.65
CHMP3-207ENST00000485465 SNTG2Q9NY99 539 aa19.14■□□□□ 0.65
CHMP3-207ENST00000485465 HES2Q9Y543 173 aa19.14■□□□□ 0.65
CHMP3-207ENST00000485465 LTBP2Q14767 1821 aa19.14■□□□□ 0.65
CHMP3-207ENST00000485465 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.13■□□□□ 0.65
CHMP3-207ENST00000485465 MAPK13O15264 365 aa19.13■□□□□ 0.65
CHMP3-207ENST00000485465 GNA14O95837 355 aa19.13■□□□□ 0.65
CHMP3-207ENST00000485465 EPB41P11171 864 aaKnown RBP19.13■□□□□ 0.65
CHMP3-207ENST00000485465 ACTN1P12814 892 aa19.13■□□□□ 0.65
CHMP3-207ENST00000485465 RGS19P49795 217 aa19.13■□□□□ 0.65
CHMP3-207ENST00000485465 EPHB4P54760 987 aa19.13■□□□□ 0.65
CHMP3-207ENST00000485465 POU5F1Q01860 360 aaKnown RBP19.13■□□□□ 0.65
CHMP3-207ENST00000485465 TMEM192Q8IY95 271 aa19.13■□□□□ 0.65
CHMP3-207ENST00000485465 FAM186BQ8IYM0 893 aa19.13■□□□□ 0.65
CHMP3-207ENST00000485465 HACE1Q8IYU2 909 aa19.13■□□□□ 0.65
CHMP3-207ENST00000485465 RNF214Q8ND24 703 aa19.13■□□□□ 0.65
CHMP3-207ENST00000485465 ACAP3Q96P50 834 aa19.13■□□□□ 0.65
CHMP3-207ENST00000485465 HSD3B7Q9H2F3 369 aa19.13■□□□□ 0.65
CHMP3-207ENST00000485465 RNF39Q9H2S5 420 aa19.13■□□□□ 0.65
CHMP3-207ENST00000485465 EFCAB14O75071 495 aa19.12■□□□□ 0.65
CHMP3-207ENST00000485465 EOMESO95936 686 aa19.12■□□□□ 0.65
CHMP3-207ENST00000485465 FGBP02675 491 aa19.12■□□□□ 0.65
CHMP3-207ENST00000485465 ADRB2P07550 413 aa19.12■□□□□ 0.65
CHMP3-207ENST00000485465 ITGA4P13612 1032 aa19.12■□□□□ 0.65
CHMP3-207ENST00000485465 ENOX2Q16206 610 aaKnown RBP19.12■□□□□ 0.65
CHMP3-207ENST00000485465 CDKAL1Q5VV42 579 aa19.12■□□□□ 0.65
CHMP3-207ENST00000485465 ZNF598Q86UK7 904 aaKnown RBP19.12■□□□□ 0.65
CHMP3-207ENST00000485465 FAM114A1Q8IWE2 563 aa19.12■□□□□ 0.65
CHMP3-207ENST00000485465 PGBD4Q96DM1 585 aa19.12■□□□□ 0.65
CHMP3-207ENST00000485465 BORCS6Q96GS4 357 aa19.12■□□□□ 0.65
CHMP3-207ENST00000485465 MFSD14AQ96MC6 490 aa19.12■□□□□ 0.65
CHMP3-207ENST00000485465 APOL6Q9BWW8 343 aa19.12■□□□□ 0.65
CHMP3-207ENST00000485465 RBSNQ9H1K0 784 aa19.12■□□□□ 0.65
CHMP3-207ENST00000485465 RPF1Q9H9Y2 349 aaKnown RBP19.12■□□□□ 0.65
CHMP3-207ENST00000485465 RBAKQ9NYW8 714 aaPredicted RBP19.12■□□□□ 0.65
CHMP3-207ENST00000485465 TET1Q8NFU7 2136 aa19.12■□□□□ 0.65
CHMP3-207ENST00000485465 GOLGA6L19H0YKK7 550 aa19.11■□□□□ 0.65
CHMP3-207ENST00000485465 BAIAP3O94812 1187 aa19.11■□□□□ 0.65
CHMP3-207ENST00000485465 ZNF18P17022 549 aa19.11■□□□□ 0.65
CHMP3-207ENST00000485465 ATF7P17544 494 aaPredicted RBP19.11■□□□□ 0.65
CHMP3-207ENST00000485465 IBSPP21815 317 aaPredicted RBP19.11■□□□□ 0.65
CHMP3-207ENST00000485465 AKAP5P24588 427 aa19.11■□□□□ 0.65
CHMP3-207ENST00000485465 YARSP54577 528 aaKnown RBP19.11■□□□□ 0.65
CHMP3-207ENST00000485465 CYP24A1Q07973 514 aa19.11■□□□□ 0.65
CHMP3-207ENST00000485465 CCDC40Q4G0X9 1142 aa19.11■□□□□ 0.65
CHMP3-207ENST00000485465 HSP90AA4PQ58FG1 418 aa19.11■□□□□ 0.65
CHMP3-207ENST00000485465 TMEM240Q5SV17 173 aa19.11■□□□□ 0.65
CHMP3-207ENST00000485465 PSRC1Q6PGN9 363 aaPredicted RBP19.11■□□□□ 0.65
CHMP3-207ENST00000485465 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.11■□□□□ 0.65
CHMP3-207ENST00000485465 ZNF365Q70YC5 407 aa19.11■□□□□ 0.65
CHMP3-207ENST00000485465 FRMD5Q7Z6J6 570 aa19.11■□□□□ 0.65
CHMP3-207ENST00000485465 BRSK2Q8IWQ3 736 aa19.11■□□□□ 0.65
CHMP3-207ENST00000485465 CNOT6LQ96LI5 555 aaKnown RBP19.11■□□□□ 0.65
CHMP3-207ENST00000485465 ELAC1Q9H777 363 aaKnown RBP19.11■□□□□ 0.65
CHMP3-207ENST00000485465 METTL14Q9HCE5 456 aaKnown RBP19.11■□□□□ 0.65
CHMP3-207ENST00000485465 MAGEC2Q9UBF1 373 aaPredicted RBP19.11■□□□□ 0.65
CHMP3-207ENST00000485465 PARP2Q9UGN5 583 aa19.11■□□□□ 0.65
CHMP3-207ENST00000485465 MEFVO15553 781 aaPredicted RBP19.1■□□□□ 0.65
CHMP3-207ENST00000485465 RECQL4O94761 1208 aa19.1■□□□□ 0.65
CHMP3-207ENST00000485465 CXCL8P10145 99 aa19.1■□□□□ 0.65
CHMP3-207ENST00000485465 MARSP56192 900 aaKnown RBP19.1■□□□□ 0.65
CHMP3-207ENST00000485465 TPM4P67936 248 aa19.1■□□□□ 0.65
CHMP3-207ENST00000485465 SLC10A6Q3KNW5 377 aa19.1■□□□□ 0.65
CHMP3-207ENST00000485465 AGMOQ6ZNB7 445 aa19.1■□□□□ 0.65
CHMP3-207ENST00000485465 INTS8Q75QN2 995 aaKnown RBP19.1■□□□□ 0.65
CHMP3-207ENST00000485465 OTOP2Q7RTS6 562 aa19.1■□□□□ 0.65
CHMP3-207ENST00000485465 RNF169Q8NCN4 708 aa19.1■□□□□ 0.65
CHMP3-207ENST00000485465 LPPQ93052 612 aa19.1■□□□□ 0.65
CHMP3-207ENST00000485465 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.1■□□□□ 0.65
CHMP3-207ENST00000485465 UBN1Q9NPG3 1134 aa19.1■□□□□ 0.65
CHMP3-207ENST00000485465 TOPORSQ9NS56 1045 aaPredicted RBP19.1■□□□□ 0.65
CHMP3-207ENST00000485465 RNF216Q9NWF9 866 aaPredicted RBP19.1■□□□□ 0.65
CHMP3-207ENST00000485465 TMEM161AQ9NX61 479 aa19.1■□□□□ 0.65
CHMP3-207ENST00000485465 ARMCX3Q9UH62 379 aaPredicted RBP19.1■□□□□ 0.65
CHMP3-207ENST00000485465 GIT1Q9Y2X7 761 aa19.1■□□□□ 0.65
CHMP3-207ENST00000485465 PCDHB7Q9Y5E2 793 aa19.1■□□□□ 0.65
CHMP3-207ENST00000485465 TTC26A0AVF1 554 aa19.09■□□□□ 0.65
CHMP3-207ENST00000485465 MEIS3P2A8K0S8 358 aa19.09■□□□□ 0.65
CHMP3-207ENST00000485465 LACTBL1A8MY62 500 aa19.09■□□□□ 0.65
CHMP3-207ENST00000485465 KCNJ18B7U540 433 aa19.09■□□□□ 0.65
CHMP3-207ENST00000485465 IL18RAPO95256 599 aa19.09■□□□□ 0.65
CHMP3-207ENST00000485465 KRT13P13646 458 aa19.09■□□□□ 0.65
CHMP3-207ENST00000485465 EEF1GP26641 437 aaKnown RBP19.09■□□□□ 0.65
CHMP3-207ENST00000485465 MAGEA10P43363 369 aaPredicted RBP19.09■□□□□ 0.65
CHMP3-207ENST00000485465 MCCD1P59942 119 aaPredicted RBP19.09■□□□□ 0.65
CHMP3-207ENST00000485465 WDR5P61964 334 aaKnown RBP19.09■□□□□ 0.65
CHMP3-207ENST00000485465 ENPEPQ07075 957 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms