RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 PPP1R13BQ96KQ4 1090 aa3.79□□□□□ -1.8
FXN-204ENST00000484259 USB1Q9BQ65 265 aaKnown RBP3.79□□□□□ -1.8
FXN-204ENST00000484259 UQCC2Q9BRT2 126 aa3.79□□□□□ -1.8
FXN-204ENST00000484259 NTPCRQ9BSD7 190 aaKnown RBP3.79□□□□□ -1.8
FXN-204ENST00000484259 SPXQ9BT56 116 aa3.79□□□□□ -1.8
FXN-204ENST00000484259 PLVAPQ9BX97 442 aa3.79□□□□□ -1.8
FXN-204ENST00000484259 CARD11Q9BXL7 1154 aa3.79□□□□□ -1.8
FXN-204ENST00000484259 CEP44Q9C0F1 390 aa3.79□□□□□ -1.8
FXN-204ENST00000484259 SENP6Q9GZR1 1112 aaPredicted RBP3.79□□□□□ -1.8
FXN-204ENST00000484259 BRD8Q9H0E9 1235 aa3.79□□□□□ -1.8
FXN-204ENST00000484259 BHMT2Q9H2M3 363 aa3.79□□□□□ -1.8
FXN-204ENST00000484259 THAP9Q9H5L6 903 aa3.79□□□□□ -1.8
FXN-204ENST00000484259 TASP1Q9H6P5 420 aa3.79□□□□□ -1.8
FXN-204ENST00000484259 C8orf33Q9H7E9 229 aaPredicted RBP3.79□□□□□ -1.8
FXN-204ENST00000484259 NRDE2Q9H7Z3 1164 aa3.79□□□□□ -1.8
FXN-204ENST00000484259 ACAD9Q9H845 621 aa3.79□□□□□ -1.8
FXN-204ENST00000484259 ERVMER34-1Q9H9K5 563 aa3.79□□□□□ -1.8
FXN-204ENST00000484259 C17orf75Q9HAS0 396 aa3.79□□□□□ -1.8
FXN-204ENST00000484259 FANCEQ9HB96 536 aa3.79□□□□□ -1.8
FXN-204ENST00000484259 ZFYVE1Q9HBF4 777 aa3.79□□□□□ -1.8
FXN-204ENST00000484259 PARVGQ9HBI0 331 aa3.79□□□□□ -1.8
FXN-204ENST00000484259 CRLF2Q9HC73 371 aa3.79□□□□□ -1.8
FXN-204ENST00000484259 TAS2R3Q9NYW6 316 aa3.79□□□□□ -1.8
FXN-204ENST00000484259 HDAC6Q9UBN7 1215 aa3.79□□□□□ -1.8
FXN-204ENST00000484259 FOXD3Q9UJU5 478 aaPredicted RBP3.79□□□□□ -1.8
FXN-204ENST00000484259 DNMT3LQ9UJW3 386 aa3.79□□□□□ -1.8
FXN-204ENST00000484259 L1RE1Q9UN81 338 aa3.79□□□□□ -1.8
FXN-204ENST00000484259 ARHGAP26Q9UNA1 814 aa3.79□□□□□ -1.8
FXN-204ENST00000484259 CLCA2Q9UQC9 943 aa3.79□□□□□ -1.8
FXN-204ENST00000484259 TMEM5Q9Y2B1 443 aa3.79□□□□□ -1.8
FXN-204ENST00000484259 CHTOPQ9Y3Y2 248 aaKnown RBP3.79□□□□□ -1.8
FXN-204ENST00000484259 TLL2Q9Y6L7 1015 aa3.79□□□□□ -1.8
FXN-204ENST00000484259 SLC4A4Q9Y6R1 1079 aa3.79□□□□□ -1.8
FXN-204ENST00000484259 URB2Q14146 1524 aaKnown RBP3.79□□□□□ -1.8
FXN-204ENST00000484259 IFT140Q96RY7 1462 aa3.79□□□□□ -1.8
FXN-204ENST00000484259 AATKQ6ZMQ8 1374 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 DNMBPQ6XZF7 1577 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 A0A1W2PQU0 124 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 hCG_1807616A0A1W2PRN6 198 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 NT5C1B-RDH14C9J2C7 533 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 H3BML4 177 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 AP3D1O14617 1153 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 FSCN2O14926 492 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 POLR2DO15514 142 aaKnown RBP3.78□□□□□ -1.8
FXN-204ENST00000484259 PCDHGA12O60330 932 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 SYNCRIPO60506 623 aaKnown RBP3.78□□□□□ -1.8
FXN-204ENST00000484259 RANBP6O60518 1105 aaKnown RBP3.78□□□□□ -1.8
FXN-204ENST00000484259 SMPD2O60906 423 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 PPM1BO75688 479 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 FGF18O76093 207 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 PGM3O95394 542 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 F13A1P00488 732 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 SERPINC1P01008 464 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 ZNF865P0CJ78 1059 aaPredicted RBP3.78□□□□□ -1.8
FXN-204ENST00000484259 MYBP10242 640 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 IFNAR1P17181 557 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 TFE3P19532 575 aaPredicted RBP3.78□□□□□ -1.8
FXN-204ENST00000484259 JAK1P23458 1154 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 EEF1DP29692 281 aaKnown RBP3.78□□□□□ -1.8
FXN-204ENST00000484259 RFC4P35249 363 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 ABCG1P45844 678 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 HNMTP50135 292 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 USP11P51784 963 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 GDF10P55107 478 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 TUBA1BP68363 451 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 BEX3Q00994 111 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 CAP1Q01518 475 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 OCRLQ01968 901 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 ITIH3Q06033 890 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 EFR3AQ14156 821 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 IKBKEQ14164 716 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 ERV3-1Q14264 604 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 ZNF460Q14592 562 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 MORF4L2Q15014 288 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 RCN1Q15293 331 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 TEAD4Q15561 434 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 SMAD1Q15797 465 aaKnown RBP3.78□□□□□ -1.8
FXN-204ENST00000484259 ZNF674Q2M3X9 581 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.78□□□□□ -1.8
FXN-204ENST00000484259 MAJINQ3KP22 176 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 ZACNQ401N2 412 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 CFAP221Q4G0U5 840 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 DENND5AQ6IQ26 1287 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 FAM117BQ6P1L5 589 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 FDX2Q6P4F2 183 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 INTS5Q6P9B9 1019 aaKnown RBP3.78□□□□□ -1.8
FXN-204ENST00000484259 DBX2Q6ZNG2 339 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 TUBA1AQ71U36 451 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 ZNF765Q7L2R6 523 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 TMC6Q7Z403 805 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 BRAPQ7Z569 592 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 ZNF804AQ7Z570 1209 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 SLFN11Q7Z7L1 901 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 ADCK1Q86TW2 530 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 KIAA0319LQ8IZA0 1049 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 MIER2Q8N344 545 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 VWA5B2Q8N398 1253 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 PDCL2Q8N4E4 241 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 NBPF15Q8N660 670 aa3.78□□□□□ -1.8
FXN-204ENST00000484259 FAM71DQ8N9W8 422 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms