RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 ZNF280BQ86YH2 543 aa17.39■□□□□ 0.37
UPF3A-208ENST00000484246 COLGALT2Q8IYK4 626 aa17.39■□□□□ 0.37
UPF3A-208ENST00000484246 THNSL1Q8IYQ7 743 aa17.39■□□□□ 0.37
UPF3A-208ENST00000484246 TMEM87AQ8NBN3 555 aa17.39■□□□□ 0.37
UPF3A-208ENST00000484246 BICD1Q96G01 975 aa17.39■□□□□ 0.37
UPF3A-208ENST00000484246 PAGE5Q96GU1 130 aa17.39■□□□□ 0.37
UPF3A-208ENST00000484246 RPS6KC1Q96S38 1066 aa17.39■□□□□ 0.37
UPF3A-208ENST00000484246 CCDC94Q9BW85 323 aaPredicted RBP17.39■□□□□ 0.37
UPF3A-208ENST00000484246 APOL6Q9BWW8 343 aa17.39■□□□□ 0.37
UPF3A-208ENST00000484246 GOLPH3LQ9H4A5 285 aa17.39■□□□□ 0.37
UPF3A-208ENST00000484246 TOPORSQ9NS56 1045 aaPredicted RBP17.39■□□□□ 0.37
UPF3A-208ENST00000484246 STK39Q9UEW8 545 aa17.39■□□□□ 0.37
UPF3A-208ENST00000484246 PARP2Q9UGN5 583 aa17.39■□□□□ 0.37
UPF3A-208ENST00000484246 PCDHB13Q9Y5F0 798 aa17.39■□□□□ 0.37
UPF3A-208ENST00000484246 A0A0B4J269 797 aa17.38■□□□□ 0.37
UPF3A-208ENST00000484246 EIF3DO15371 548 aaKnown RBP eCLIP17.38■□□□□ 0.37
UPF3A-208ENST00000484246 ZC3H11AO75152 810 aaKnown RBP eCLIP17.38■□□□□ 0.37
UPF3A-208ENST00000484246 DDHD2O94830 711 aa17.38■□□□□ 0.37
UPF3A-208ENST00000484246 POMCP01189 267 aa17.38■□□□□ 0.37
UPF3A-208ENST00000484246 SLC11A1P49279 550 aa17.38■□□□□ 0.37
UPF3A-208ENST00000484246 CASP5P51878 434 aa17.38■□□□□ 0.37
UPF3A-208ENST00000484246 POU5F1Q01860 360 aaKnown RBP17.38■□□□□ 0.37
UPF3A-208ENST00000484246 ZC2HC1CQ53FD0 456 aaPredicted RBP17.38■□□□□ 0.37
UPF3A-208ENST00000484246 FAM26FQ5R3K3 315 aa17.38■□□□□ 0.37
UPF3A-208ENST00000484246 PDE12Q6L8Q7 609 aaKnown RBP17.38■□□□□ 0.37
UPF3A-208ENST00000484246 ALKAL1Q6UXT8 129 aa17.38■□□□□ 0.37
UPF3A-208ENST00000484246 STXBP4Q6ZWJ1 553 aa17.38■□□□□ 0.37
UPF3A-208ENST00000484246 CEP120Q8N960 986 aa17.38■□□□□ 0.37
UPF3A-208ENST00000484246 ZBTB45Q96K62 511 aaPredicted RBP17.38■□□□□ 0.37
UPF3A-208ENST00000484246 SNX27Q96L92 541 aa17.38■□□□□ 0.37
UPF3A-208ENST00000484246 HAPLN2Q9GZV7 340 aa17.38■□□□□ 0.37
UPF3A-208ENST00000484246 MIOSQ9NXC5 875 aa17.38■□□□□ 0.37
UPF3A-208ENST00000484246 ANKFY1Q9P2R3 1169 aa17.38■□□□□ 0.37
UPF3A-208ENST00000484246 EXOC7Q9UPT5 735 aa17.38■□□□□ 0.37
UPF3A-208ENST00000484246 UBE4BO95155 1302 aa17.38■□□□□ 0.37
UPF3A-208ENST00000484246 FSCN2O14926 492 aa17.37■□□□□ 0.37
UPF3A-208ENST00000484246 GCNT3O95395 438 aa17.37■□□□□ 0.37
UPF3A-208ENST00000484246 DNAJB1P25685 340 aa17.37■□□□□ 0.37
UPF3A-208ENST00000484246 CUL4BQ13620 913 aa17.37■□□□□ 0.37
UPF3A-208ENST00000484246 COL19A1Q14993 1142 aa17.37■□□□□ 0.37
UPF3A-208ENST00000484246 NAB2Q15742 525 aa17.37■□□□□ 0.37
UPF3A-208ENST00000484246 SLFN12LQ6IEE8 588 aa17.37■□□□□ 0.37
UPF3A-208ENST00000484246 EPM2AIP1Q7L775 607 aaPredicted RBP17.37■□□□□ 0.37
UPF3A-208ENST00000484246 POF1BQ8WVV4 589 aa17.37■□□□□ 0.37
UPF3A-208ENST00000484246 IGSF21Q96ID5 467 aa17.37■□□□□ 0.37
UPF3A-208ENST00000484246 FAM193BQ96PV7 902 aaPredicted RBP17.37■□□□□ 0.37
UPF3A-208ENST00000484246 ACCSQ96QU6 501 aa17.37■□□□□ 0.37
UPF3A-208ENST00000484246 TCHPQ9BT92 498 aa17.37■□□□□ 0.37
UPF3A-208ENST00000484246 FGFBP2Q9BYJ0 223 aa17.37■□□□□ 0.37
UPF3A-208ENST00000484246 NSUN3Q9H649 340 aaKnown RBP17.37■□□□□ 0.37
UPF3A-208ENST00000484246 ALG13Q9NP73 1137 aaKnown RBP17.37■□□□□ 0.37
UPF3A-208ENST00000484246 KLK14Q9P0G3 267 aa17.37■□□□□ 0.37
UPF3A-208ENST00000484246 CNTN3Q9P232 1028 aa17.37■□□□□ 0.37
UPF3A-208ENST00000484246 DNAJB4Q9UDY4 337 aa17.37■□□□□ 0.37
UPF3A-208ENST00000484246 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.37■□□□□ 0.37
UPF3A-208ENST00000484246 KIAA1671Q9BY89 1806 aa17.37■□□□□ 0.37
UPF3A-208ENST00000484246 OGTO15294 1046 aa17.36■□□□□ 0.37
UPF3A-208ENST00000484246 KLRC4O43908 158 aa17.36■□□□□ 0.37
UPF3A-208ENST00000484246 EFEMP2O95967 443 aa17.36■□□□□ 0.37
UPF3A-208ENST00000484246 ADRB2P07550 413 aa17.36■□□□□ 0.37
UPF3A-208ENST00000484246 CLTAP09496 248 aa17.36■□□□□ 0.37
UPF3A-208ENST00000484246 MYBP10242 640 aa17.36■□□□□ 0.37
UPF3A-208ENST00000484246 KCNE1P15382 129 aa17.36■□□□□ 0.37
UPF3A-208ENST00000484246 PBX3P40426 434 aa17.36■□□□□ 0.37
UPF3A-208ENST00000484246 AFMP43652 599 aa17.36■□□□□ 0.37
UPF3A-208ENST00000484246 YARSP54577 528 aaKnown RBP17.36■□□□□ 0.37
UPF3A-208ENST00000484246 KRT17Q04695 432 aa17.36■□□□□ 0.37
UPF3A-208ENST00000484246 TUSC3Q13454 348 aa17.36■□□□□ 0.37
UPF3A-208ENST00000484246 BMT2Q1RMZ1 405 aa17.36■□□□□ 0.37
UPF3A-208ENST00000484246 KRBA2Q6ZNG9 492 aa17.36■□□□□ 0.37
UPF3A-208ENST00000484246 ZBTB33Q86T24 672 aa17.36■□□□□ 0.37
UPF3A-208ENST00000484246 TMEM173Q86WV6 379 aaPredicted RBP17.36■□□□□ 0.37
UPF3A-208ENST00000484246 FMR1NBQ8N0W7 255 aaPredicted RBP17.36■□□□□ 0.37
UPF3A-208ENST00000484246 TMEM169Q96HH4 297 aa17.36■□□□□ 0.37
UPF3A-208ENST00000484246 ACAP3Q96P50 834 aa17.36■□□□□ 0.37
UPF3A-208ENST00000484246 PPP1R10Q96QC0 940 aaKnown RBP17.36■□□□□ 0.37
UPF3A-208ENST00000484246 TMEM206Q9H813 350 aa17.36■□□□□ 0.37
UPF3A-208ENST00000484246 PLEKHA5Q9HAU0 1116 aa17.36■□□□□ 0.37
UPF3A-208ENST00000484246 TLR9Q9NR96 1032 aa17.36■□□□□ 0.37
UPF3A-208ENST00000484246 MARCH5Q9NX47 278 aa17.36■□□□□ 0.37
UPF3A-208ENST00000484246 PUF60Q9UHX1 559 aaKnown RBP17.36■□□□□ 0.37
UPF3A-208ENST00000484246 GDAQ9Y2T3 454 aa17.36■□□□□ 0.37
UPF3A-208ENST00000484246 NLRC5Q86WI3 1866 aa17.35■□□□□ 0.37
UPF3A-208ENST00000484246 TRANK1O15050 2925 aa17.35■□□□□ 0.37
UPF3A-208ENST00000484246 GOLGA6L4A6NEF3 574 aa17.35■□□□□ 0.37
UPF3A-208ENST00000484246 MEFVO15553 781 aaPredicted RBP17.35■□□□□ 0.37
UPF3A-208ENST00000484246 ZNF202O95125 648 aa17.35■□□□□ 0.37
UPF3A-208ENST00000484246 ALDH2P05091 517 aa17.35■□□□□ 0.37
UPF3A-208ENST00000484246 THP07101 528 aa17.35■□□□□ 0.37
UPF3A-208ENST00000484246 FAM160A1Q05DH4 1040 aa17.35■□□□□ 0.37
UPF3A-208ENST00000484246 POSTNQ15063 836 aa17.35■□□□□ 0.37
UPF3A-208ENST00000484246 DDX53Q86TM3 631 aaKnown RBP17.35■□□□□ 0.37
UPF3A-208ENST00000484246 GRAMD1CQ8IYS0 662 aa17.35■□□□□ 0.37
UPF3A-208ENST00000484246 RNF168Q8IYW5 571 aaPredicted RBP17.35■□□□□ 0.37
UPF3A-208ENST00000484246 ENGASEQ8NFI3 743 aa17.35■□□□□ 0.37
UPF3A-208ENST00000484246 BCL7CQ8WUZ0 217 aaPredicted RBP17.35■□□□□ 0.37
UPF3A-208ENST00000484246 CCDC34Q96HJ3 373 aa17.35■□□□□ 0.37
UPF3A-208ENST00000484246 TSPAN18Q96SJ8 248 aa17.35■□□□□ 0.37
UPF3A-208ENST00000484246 BLZF1Q9H2G9 400 aa17.35■□□□□ 0.37
UPF3A-208ENST00000484246 TBC1D7Q9P0N9 293 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms