RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 PIK3AP1Q6ZUJ8 805 aa6.89□□□□□ -1.31
PTCD3-215ENST00000484203 TMCO2Q7Z6W1 182 aaPredicted RBP6.89□□□□□ -1.31
PTCD3-215ENST00000484203 ABI1Q8IZP0 508 aa6.89□□□□□ -1.31
PTCD3-215ENST00000484203 NEK9Q8TD19 979 aa6.89□□□□□ -1.31
PTCD3-215ENST00000484203 GDPD5Q8WTR4 605 aa6.89□□□□□ -1.31
PTCD3-215ENST00000484203 TRAPPC12Q8WVT3 735 aa6.89□□□□□ -1.31
PTCD3-215ENST00000484203 EDARADDQ8WWZ3 215 aa6.89□□□□□ -1.31
PTCD3-215ENST00000484203 ADAM2Q99965 735 aa6.89□□□□□ -1.31
PTCD3-215ENST00000484203 C17orf80Q9BSJ5 609 aa6.89□□□□□ -1.31
PTCD3-215ENST00000484203 TRAIPQ9BWF2 469 aa6.89□□□□□ -1.31
PTCD3-215ENST00000484203 UNC45AQ9H3U1 944 aa6.89□□□□□ -1.31
PTCD3-215ENST00000484203 NSUN3Q9H649 340 aaKnown RBP6.89□□□□□ -1.31
PTCD3-215ENST00000484203 ZSWIM4Q9H7M6 989 aa6.89□□□□□ -1.31
PTCD3-215ENST00000484203 ATP6V0A4Q9HBG4 840 aa6.89□□□□□ -1.31
PTCD3-215ENST00000484203 ERVK-5Q9HDB9 667 aa6.89□□□□□ -1.31
PTCD3-215ENST00000484203 KCNMB3Q9NPA1 279 aa6.89□□□□□ -1.31
PTCD3-215ENST00000484203 TMEM161AQ9NX61 479 aa6.89□□□□□ -1.31
PTCD3-215ENST00000484203 PUF60Q9UHX1 559 aaKnown RBP6.89□□□□□ -1.31
PTCD3-215ENST00000484203 MTUS1Q9ULD2 1270 aa6.89□□□□□ -1.31
PTCD3-215ENST00000484203 ST3GAL5Q9UNP4 418 aa6.89□□□□□ -1.31
PTCD3-215ENST00000484203 PCDHB12Q9Y5F1 795 aa6.89□□□□□ -1.31
PTCD3-215ENST00000484203 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.89□□□□□ -1.31
PTCD3-215ENST00000484203 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.88□□□□□ -1.31
PTCD3-215ENST00000484203 IGKV6-21A0A0C4DH24 114 aa6.88□□□□□ -1.31
PTCD3-215ENST00000484203 RFXAPO00287 272 aa6.88□□□□□ -1.31
PTCD3-215ENST00000484203 ZNF862O60290 1169 aa6.88□□□□□ -1.31
PTCD3-215ENST00000484203 SIN3BO75182 1162 aa6.88□□□□□ -1.31
PTCD3-215ENST00000484203 XYLBO75191 536 aa6.88□□□□□ -1.31
PTCD3-215ENST00000484203 MAFO75444 373 aaPredicted RBP6.88□□□□□ -1.31
PTCD3-215ENST00000484203 SASH3O75995 380 aa6.88□□□□□ -1.31
PTCD3-215ENST00000484203 ARHGEF15O94989 841 aa6.88□□□□□ -1.31
PTCD3-215ENST00000484203 SRGAP2BP0DMP2 458 aa6.88□□□□□ -1.31
PTCD3-215ENST00000484203 XRCC6P12956 609 aaKnown RBP eCLIP6.88□□□□□ -1.31
PTCD3-215ENST00000484203 DARSP14868 501 aaKnown RBP6.88□□□□□ -1.31
PTCD3-215ENST00000484203 LAG3P18627 525 aa6.88□□□□□ -1.31
PTCD3-215ENST00000484203 TARSP26639 723 aaKnown RBP6.88□□□□□ -1.31
PTCD3-215ENST00000484203 EIF1AXP47813 144 aaKnown RBP6.88□□□□□ -1.31
PTCD3-215ENST00000484203 RBM25P49756 843 aaKnown RBP6.88□□□□□ -1.31
PTCD3-215ENST00000484203 RAB27AP51159 221 aa6.88□□□□□ -1.31
PTCD3-215ENST00000484203 NLRP11P59045 1033 aaKnown RBP6.88□□□□□ -1.31
PTCD3-215ENST00000484203 FAM189BP81408 668 aa6.88□□□□□ -1.31
PTCD3-215ENST00000484203 TMEM62Q0P6H9 643 aa6.88□□□□□ -1.31
PTCD3-215ENST00000484203 MXD4Q14582 209 aaPredicted RBP6.88□□□□□ -1.31
PTCD3-215ENST00000484203 EPHA7Q15375 998 aa6.88□□□□□ -1.31
PTCD3-215ENST00000484203 TARBP2Q15633 366 aaKnown RBP6.88□□□□□ -1.31
PTCD3-215ENST00000484203 NPY5RQ15761 445 aa6.88□□□□□ -1.31
PTCD3-215ENST00000484203 LEXMQ3ZCV2 418 aa6.88□□□□□ -1.31
PTCD3-215ENST00000484203 ALKBH2Q6NS38 261 aa6.88□□□□□ -1.31
PTCD3-215ENST00000484203 C4orf19Q8IY42 314 aa6.88□□□□□ -1.31
PTCD3-215ENST00000484203 LINC01465Q8N7H1 131 aa6.88□□□□□ -1.31
PTCD3-215ENST00000484203 TCP11Q8WWU5 503 aa6.88□□□□□ -1.31
PTCD3-215ENST00000484203 CCDC43Q96MW1 224 aaKnown RBP6.88□□□□□ -1.31
PTCD3-215ENST00000484203 CDCA3Q99618 268 aaPredicted RBP6.88□□□□□ -1.31
PTCD3-215ENST00000484203 OSMRQ99650 979 aa6.88□□□□□ -1.31
PTCD3-215ENST00000484203 C1QTNF1Q9BXJ1 281 aa6.88□□□□□ -1.31
PTCD3-215ENST00000484203 MRPL9Q9BYD2 267 aaKnown RBP6.88□□□□□ -1.31
PTCD3-215ENST00000484203 TMEM117Q9H0C3 514 aa6.88□□□□□ -1.31
PTCD3-215ENST00000484203 ADAMTS10Q9H324 1103 aa6.88□□□□□ -1.31
PTCD3-215ENST00000484203 IGFLR1Q9H665 355 aa6.88□□□□□ -1.31
PTCD3-215ENST00000484203 UBE2ZQ9H832 354 aaPredicted RBP6.88□□□□□ -1.31
PTCD3-215ENST00000484203 RC3H2Q9HBD1 1191 aaKnown RBP6.88□□□□□ -1.31
PTCD3-215ENST00000484203 C11orf16Q9NQ32 467 aa6.88□□□□□ -1.31
PTCD3-215ENST00000484203 CYP26B1Q9NR63 512 aa6.88□□□□□ -1.31
PTCD3-215ENST00000484203 EGFL7Q9UHF1 273 aa6.88□□□□□ -1.31
PTCD3-215ENST00000484203 PCDHA12Q9UN75 941 aa6.88□□□□□ -1.31
PTCD3-215ENST00000484203 KCNJ14Q9UNX9 436 aa6.88□□□□□ -1.31
PTCD3-215ENST00000484203 PLAGL2Q9UPG8 496 aa6.88□□□□□ -1.31
PTCD3-215ENST00000484203 LZTS1Q9Y250 596 aa6.88□□□□□ -1.31
PTCD3-215ENST00000484203 NOC2LQ9Y3T9 749 aaKnown RBP6.88□□□□□ -1.31
PTCD3-215ENST00000484203 KCNMB2Q9Y691 235 aa6.88□□□□□ -1.31
PTCD3-215ENST00000484203 COL4A6Q14031 1691 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 MYO9BQ13459 2157 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 A0A0U1RQF3 1178 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 C9IYK1 514 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 NEMFO60524 1076 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 ICMTO60725 284 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 LYPLA2O95372 231 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 CTDNEP1O95476 244 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 MMP1P03956 469 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 VTNP04004 478 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 EPXP11678 715 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 NFKB1P19838 968 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 AMPD1P23109 780 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 TRAPPC10P48553 1259 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 MCM2P49736 904 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 GSK3AP49840 483 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 GPC3P51654 580 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 CLCN3P51790 818 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 POLGP54098 1239 aaPredicted RBP6.87□□□□□ -1.31
PTCD3-215ENST00000484203 KRT17Q04695 432 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 DNM1Q05193 864 aaKnown RBP6.87□□□□□ -1.31
PTCD3-215ENST00000484203 POU5F1BQ06416 359 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 GNL2Q13823 731 aaKnown RBP6.87□□□□□ -1.31
PTCD3-215ENST00000484203 TFDP1Q14186 410 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 COL19A1Q14993 1142 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 RABEP1Q15276 862 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 CALCRLQ16602 461 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 ME3Q16798 604 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 TMEM266Q2M3C6 531 aa6.87□□□□□ -1.31
PTCD3-215ENST00000484203 SPOUT1Q5T280 376 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms