RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 CNTNAP3Q9BZ76 1288 aa14.35□□□□□ -0.11
UBR4-213ENST00000483922 PLA2G2FQ9BZM2 168 aa14.35□□□□□ -0.11
UBR4-213ENST00000483922 SLKQ9H2G2 1235 aaPredicted RBP14.35□□□□□ -0.11
UBR4-213ENST00000483922 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.35□□□□□ -0.11
UBR4-213ENST00000483922 HCFC1R1Q9NWW0 138 aa14.35□□□□□ -0.11
UBR4-213ENST00000483922 FBXW11Q9UKB1 542 aa14.35□□□□□ -0.11
UBR4-213ENST00000483922 CDH7Q9ULB5 785 aa14.35□□□□□ -0.11
UBR4-213ENST00000483922 PPME1Q9Y570 386 aa14.35□□□□□ -0.11
UBR4-213ENST00000483922 NOTCH4Q99466 2003 aa14.35□□□□□ -0.11
UBR4-213ENST00000483922 A0A1B0GUA9 196 aa14.34□□□□□ -0.11
UBR4-213ENST00000483922 INO80B-WBP1J3KQ70 363 aa14.34□□□□□ -0.11
UBR4-213ENST00000483922 NRG2O14511 850 aaPredicted RBP14.34□□□□□ -0.11
UBR4-213ENST00000483922 PTGESO14684 152 aa14.34□□□□□ -0.11
UBR4-213ENST00000483922 ERLIN2O94905 339 aa14.34□□□□□ -0.11
UBR4-213ENST00000483922 RFX1P22670 979 aa14.34□□□□□ -0.11
UBR4-213ENST00000483922 CYP4A11Q02928 519 aa14.34□□□□□ -0.11
UBR4-213ENST00000483922 POU5F1BQ06416 359 aa14.34□□□□□ -0.11
UBR4-213ENST00000483922 NOTUMQ6P988 496 aa14.34□□□□□ -0.11
UBR4-213ENST00000483922 RSPO2Q6UXX9 243 aaPredicted RBP14.34□□□□□ -0.11
UBR4-213ENST00000483922 POTEDQ86YR6 584 aa14.34□□□□□ -0.11
UBR4-213ENST00000483922 HASPINQ8TF76 798 aa14.34□□□□□ -0.11
UBR4-213ENST00000483922 NELL1Q92832 810 aa14.34□□□□□ -0.11
UBR4-213ENST00000483922 CCDC51Q96ER9 411 aa14.34□□□□□ -0.11
UBR4-213ENST00000483922 MTRQ99707 1265 aa14.34□□□□□ -0.11
UBR4-213ENST00000483922 HSD17B14Q9BPX1 270 aa14.34□□□□□ -0.11
UBR4-213ENST00000483922 PHF20Q9BVI0 1012 aa14.34□□□□□ -0.11
UBR4-213ENST00000483922 ZSWIM6Q9HCJ5 1215 aa14.34□□□□□ -0.11
UBR4-213ENST00000483922 DNMT3BQ9UBC3 853 aaKnown RBP14.34□□□□□ -0.11
UBR4-213ENST00000483922 USP20Q9Y2K6 914 aa14.34□□□□□ -0.11
UBR4-213ENST00000483922 TDRD15B5MCY1 1934 aaKnown RBP14.34□□□□□ -0.11
UBR4-213ENST00000483922 MYH15Q9Y2K3 1946 aa14.34□□□□□ -0.11
UBR4-213ENST00000483922 FAM170BA6NMN3 283 aa14.33□□□□□ -0.12
UBR4-213ENST00000483922 CCL16O15467 120 aa14.33□□□□□ -0.12
UBR4-213ENST00000483922 TADA2AO75478 443 aa14.33□□□□□ -0.12
UBR4-213ENST00000483922 NPTXRO95502 500 aa14.33□□□□□ -0.12
UBR4-213ENST00000483922 ATXN1P54253 815 aaKnown RBP14.33□□□□□ -0.12
UBR4-213ENST00000483922 ZNF528Q3MIS6 628 aa14.33□□□□□ -0.12
UBR4-213ENST00000483922 VARS2Q5ST30 1063 aaKnown RBP14.33□□□□□ -0.12
UBR4-213ENST00000483922 TSSK4Q6SA08 328 aa14.33□□□□□ -0.12
UBR4-213ENST00000483922 CD300LGQ6UXG3 332 aa14.33□□□□□ -0.12
UBR4-213ENST00000483922 OTUD6AQ7L8S5 288 aa14.33□□□□□ -0.12
UBR4-213ENST00000483922 KRT25Q7Z3Z0 450 aa14.33□□□□□ -0.12
UBR4-213ENST00000483922 EXOC8Q8IYI6 725 aa14.33□□□□□ -0.12
UBR4-213ENST00000483922 ZBTB44Q8NCP5 570 aa14.33□□□□□ -0.12
UBR4-213ENST00000483922 HINFPQ9BQA5 517 aa14.33□□□□□ -0.12
UBR4-213ENST00000483922 ZSWIM4Q9H7M6 989 aa14.33□□□□□ -0.12
UBR4-213ENST00000483922 ZFP37Q9Y6Q3 630 aaPredicted RBP14.33□□□□□ -0.12
UBR4-213ENST00000483922 ARID2Q68CP9 1835 aa14.33□□□□□ -0.12
UBR4-213ENST00000483922 PATJQ8NI35 1801 aa14.32□□□□□ -0.12
UBR4-213ENST00000483922 CASTOR2A6NHX0 329 aa14.32□□□□□ -0.12
UBR4-213ENST00000483922 CCNT1O60563 726 aaKnown RBP14.32□□□□□ -0.12
UBR4-213ENST00000483922 DKC1O60832 514 aaKnown RBP eCLIP14.32□□□□□ -0.12
UBR4-213ENST00000483922 LILRB5O75023 590 aa14.32□□□□□ -0.12
UBR4-213ENST00000483922 KIF4AO95239 1232 aa14.32□□□□□ -0.12
UBR4-213ENST00000483922 EDN1P05305 212 aa14.32□□□□□ -0.12
UBR4-213ENST00000483922 CSTF1Q05048 431 aaKnown RBP14.32□□□□□ -0.12
UBR4-213ENST00000483922 STK3Q13188 491 aa14.32□□□□□ -0.12
UBR4-213ENST00000483922 HSP90AA2PQ14568 343 aaPredicted RBP14.32□□□□□ -0.12
UBR4-213ENST00000483922 MXD4Q14582 209 aaPredicted RBP14.32□□□□□ -0.12
UBR4-213ENST00000483922 PCBP1Q15365 356 aaKnown RBP eCLIP14.32□□□□□ -0.12
UBR4-213ENST00000483922 MLF2Q15773 248 aaPredicted RBP14.32□□□□□ -0.12
UBR4-213ENST00000483922 NCAPH2Q6IBW4 605 aa14.32□□□□□ -0.12
UBR4-213ENST00000483922 GALNT17Q6IS24 598 aa14.32□□□□□ -0.12
UBR4-213ENST00000483922 ZC3H14Q6PJT7 736 aaKnown RBP14.32□□□□□ -0.12
UBR4-213ENST00000483922 RUFY3Q7L099 469 aa14.32□□□□□ -0.12
UBR4-213ENST00000483922 NEK8Q86SG6 692 aa14.32□□□□□ -0.12
UBR4-213ENST00000483922 TPH2Q8IWU9 490 aa14.32□□□□□ -0.12
UBR4-213ENST00000483922 ZNF687Q8N1G0 1237 aa14.32□□□□□ -0.12
UBR4-213ENST00000483922 PIK3R5Q8WYR1 880 aa14.32□□□□□ -0.12
UBR4-213ENST00000483922 ZNF274Q96GC6 653 aaPredicted RBP14.32□□□□□ -0.12
UBR4-213ENST00000483922 KXD1Q9BQD3 176 aa14.32□□□□□ -0.12
UBR4-213ENST00000483922 SPATA6Q9NWH7 488 aaPredicted RBP14.32□□□□□ -0.12
UBR4-213ENST00000483922 FBXO4Q9UKT5 387 aa14.32□□□□□ -0.12
UBR4-213ENST00000483922 WNT7AO00755 349 aa14.31□□□□□ -0.12
UBR4-213ENST00000483922 TBX3O15119 743 aa14.31□□□□□ -0.12
UBR4-213ENST00000483922 KINO60870 393 aaKnown RBP14.31□□□□□ -0.12
UBR4-213ENST00000483922 NR1I2O75469 434 aa14.31□□□□□ -0.12
UBR4-213ENST00000483922 C8AP07357 584 aa14.31□□□□□ -0.12
UBR4-213ENST00000483922 HNRNPA1P09651 372 aaKnown RBP eCLIP14.31□□□□□ -0.12
UBR4-213ENST00000483922 TARSP26639 723 aaKnown RBP14.31□□□□□ -0.12
UBR4-213ENST00000483922 GRIK3Q13003 919 aa14.31□□□□□ -0.12
UBR4-213ENST00000483922 UBXN2BQ14CS0 331 aa14.31□□□□□ -0.12
UBR4-213ENST00000483922 FAM171A1Q5VUB5 890 aa14.31□□□□□ -0.12
UBR4-213ENST00000483922 SLC27A1Q6PCB7 646 aa14.31□□□□□ -0.12
UBR4-213ENST00000483922 ELMSAN1Q6PJG2 1045 aa14.31□□□□□ -0.12
UBR4-213ENST00000483922 PIK3AP1Q6ZUJ8 805 aa14.31□□□□□ -0.12
UBR4-213ENST00000483922 CEP57Q86XR8 500 aa14.31□□□□□ -0.12
UBR4-213ENST00000483922 NPAS3Q8IXF0 933 aa14.31□□□□□ -0.12
UBR4-213ENST00000483922 TRIM22Q8IYM9 498 aa14.31□□□□□ -0.12
UBR4-213ENST00000483922 CLDN23Q96B33 292 aa14.31□□□□□ -0.12
UBR4-213ENST00000483922 SHDQ96IW2 340 aa14.31□□□□□ -0.12
UBR4-213ENST00000483922 EIF2AK1Q9BQI3 630 aaKnown RBP14.31□□□□□ -0.12
UBR4-213ENST00000483922 NFKBIZQ9BYH8 718 aa14.31□□□□□ -0.12
UBR4-213ENST00000483922 PARD6AQ9NPB6 346 aa14.31□□□□□ -0.12
UBR4-213ENST00000483922 LTB4R2Q9NPC1 389 aa14.31□□□□□ -0.12
UBR4-213ENST00000483922 GPRC5CQ9NQ84 441 aa14.31□□□□□ -0.12
UBR4-213ENST00000483922 PARP2Q9UGN5 583 aa14.31□□□□□ -0.12
UBR4-213ENST00000483922 SPTBN2O15020 2390 aa14.31□□□□□ -0.12
UBR4-213ENST00000483922 LYPLA2O95372 231 aa14.3□□□□□ -0.12
UBR4-213ENST00000483922 RARRES1P49788 294 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms