RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 ADH1AP07327 375 aa19.9■□□□□ 0.78
ATG4B-221ENST00000483778 U2AF2P26368 475 aaKnown RBP eCLIP19.9■□□□□ 0.783e-9■■□□□ 14.1
ATG4B-221ENST00000483778 CDC25AP30304 524 aa19.9■□□□□ 0.78
ATG4B-221ENST00000483778 FXR2P51116 673 aaKnown RBP eCLIP19.9■□□□□ 0.78
ATG4B-221ENST00000483778 PTGDRQ13258 359 aa19.9■□□□□ 0.78
ATG4B-221ENST00000483778 PRPF4BQ13523 1007 aaKnown RBP19.9■□□□□ 0.78
ATG4B-221ENST00000483778 ZBTB8OSQ8IWT0 167 aa19.9■□□□□ 0.78
ATG4B-221ENST00000483778 HACE1Q8IYU2 909 aa19.9■□□□□ 0.78
ATG4B-221ENST00000483778 PLCD3Q8N3E9 789 aa19.9■□□□□ 0.78
ATG4B-221ENST00000483778 TMEM105Q8N8V8 129 aa19.9■□□□□ 0.78
ATG4B-221ENST00000483778 ERMNQ8TAM6 284 aa19.9■□□□□ 0.78
ATG4B-221ENST00000483778 RSAD2Q8WXG1 361 aa19.9■□□□□ 0.78
ATG4B-221ENST00000483778 PRIMPOLQ96LW4 560 aa19.9■□□□□ 0.78
ATG4B-221ENST00000483778 KIAA1024Q9UPX6 916 aa19.9■□□□□ 0.78
ATG4B-221ENST00000483778 ACKR2O00590 384 aa19.89■□□□□ 0.77
ATG4B-221ENST00000483778 TGM5O43548 720 aa19.89■□□□□ 0.77
ATG4B-221ENST00000483778 TADA2AO75478 443 aa19.89■□□□□ 0.77
ATG4B-221ENST00000483778 GLUD1P00367 558 aa19.89■□□□□ 0.77
ATG4B-221ENST00000483778 MAPK6Q16659 721 aa19.89■□□□□ 0.77
ATG4B-221ENST00000483778 USP41Q3LFD5 358 aa19.89■□□□□ 0.77
ATG4B-221ENST00000483778 RTP2Q5QGT7 225 aa19.89■□□□□ 0.77
ATG4B-221ENST00000483778 C15orf39Q6ZRI6 1047 aa19.89■□□□□ 0.77
ATG4B-221ENST00000483778 FAM184AQ8NB25 1140 aa19.89■□□□□ 0.77
ATG4B-221ENST00000483778 ST13P5Q8NFI4 369 aaPredicted RBP19.89■□□□□ 0.77
ATG4B-221ENST00000483778 CMASQ8NFW8 434 aaPredicted RBP19.89■□□□□ 0.77
ATG4B-221ENST00000483778 DDX19AQ9NUU7 478 aaKnown RBP19.89■□□□□ 0.77
ATG4B-221ENST00000483778 LRWD1Q9UFC0 647 aa19.89■□□□□ 0.77
ATG4B-221ENST00000483778 SSX2IPQ9Y2D8 614 aa19.89■□□□□ 0.77
ATG4B-221ENST00000483778 GDAQ9Y2T3 454 aa19.89■□□□□ 0.77
ATG4B-221ENST00000483778 ZFHX2Q9C0A1 2572 aaPredicted RBP19.88■□□□□ 0.77
ATG4B-221ENST00000483778 E9PMD0 336 aa19.88■□□□□ 0.77
ATG4B-221ENST00000483778 N4BP3O15049 544 aa19.88■□□□□ 0.77
ATG4B-221ENST00000483778 ADAM12O43184 909 aa19.88■□□□□ 0.77
ATG4B-221ENST00000483778 EIF5BO60841 1220 aaKnown RBP19.88■□□□□ 0.77
ATG4B-221ENST00000483778 NR1I2O75469 434 aa19.88■□□□□ 0.77
ATG4B-221ENST00000483778 KIF4AO95239 1232 aa19.88■□□□□ 0.77
ATG4B-221ENST00000483778 NAMPTP43490 491 aa19.88■□□□□ 0.77
ATG4B-221ENST00000483778 PTPN5P54829 565 aa19.88■□□□□ 0.77
ATG4B-221ENST00000483778 HMGN5P82970 282 aaKnown RBP19.88■□□□□ 0.77
ATG4B-221ENST00000483778 ORC2Q13416 577 aaPredicted RBP19.88■□□□□ 0.77
ATG4B-221ENST00000483778 TUSC3Q13454 348 aa19.88■□□□□ 0.77
ATG4B-221ENST00000483778 HSP90AA2PQ14568 343 aaPredicted RBP19.88■□□□□ 0.77
ATG4B-221ENST00000483778 CCDC149Q6ZUS6 474 aa19.88■□□□□ 0.77
ATG4B-221ENST00000483778 OTOP3Q7RTS5 596 aa19.88■□□□□ 0.77
ATG4B-221ENST00000483778 KCNK18Q7Z418 384 aa19.88■□□□□ 0.77
ATG4B-221ENST00000483778 DAW1Q8N136 415 aa19.88■□□□□ 0.77
ATG4B-221ENST00000483778 DEPTORQ8TB45 409 aa19.88■□□□□ 0.77
ATG4B-221ENST00000483778 MYADMQ96S97 322 aa19.88■□□□□ 0.77
ATG4B-221ENST00000483778 NT5C3AQ9H0P0 336 aa19.88■□□□□ 0.77
ATG4B-221ENST00000483778 C2orf40Q9H1Z8 148 aa19.88■□□□□ 0.77
ATG4B-221ENST00000483778 KCNK12Q9HB15 430 aa19.88■□□□□ 0.77
ATG4B-221ENST00000483778 SH2B1Q9NRF2 756 aaPredicted RBP19.88■□□□□ 0.77
ATG4B-221ENST00000483778 CITO14578 2027 aa19.88■□□□□ 0.77
ATG4B-221ENST00000483778 NARSO43776 548 aaKnown RBP19.87■□□□□ 0.77
ATG4B-221ENST00000483778 TRAPPC10P48553 1259 aa19.87■□□□□ 0.77
ATG4B-221ENST00000483778 GNL2Q13823 731 aaKnown RBP19.87■□□□□ 0.77
ATG4B-221ENST00000483778 PDIA5Q14554 519 aa19.87■□□□□ 0.77
ATG4B-221ENST00000483778 TMEM132AQ24JP5 1023 aa19.87■□□□□ 0.77
ATG4B-221ENST00000483778 CD300LGQ6UXG3 332 aa19.87■□□□□ 0.77
ATG4B-221ENST00000483778 IGSF22Q8N9C0 903 aa19.87■□□□□ 0.77
ATG4B-221ENST00000483778 SMG7Q92540 1137 aaKnown RBP19.87■□□□□ 0.77
ATG4B-221ENST00000483778 ACSF2Q96CM8 615 aaPredicted RBP19.87■□□□□ 0.77
ATG4B-221ENST00000483778 CLSTN3Q9BQT9 956 aa19.87■□□□□ 0.77
ATG4B-221ENST00000483778 MMTAG2Q9BU76 263 aaKnown RBP19.87■□□□□ 0.77
ATG4B-221ENST00000483778 WDR6Q9NNW5 1121 aaKnown RBP19.87■□□□□ 0.77
ATG4B-221ENST00000483778 FNIP2Q9P278 1114 aa19.87■□□□□ 0.77
ATG4B-221ENST00000483778 ZMYM2Q9UBW7 1377 aa19.86■□□□□ 0.77
ATG4B-221ENST00000483778 H0Y858 1186 aa19.86■□□□□ 0.77
ATG4B-221ENST00000483778 PI15O43692 258 aa19.86■□□□□ 0.77
ATG4B-221ENST00000483778 THP07101 528 aa19.86■□□□□ 0.77
ATG4B-221ENST00000483778 NPR3P17342 541 aa19.86■□□□□ 0.77
ATG4B-221ENST00000483778 MUTP22033 750 aa19.86■□□□□ 0.77
ATG4B-221ENST00000483778 FAM171A1Q5VUB5 890 aa19.86■□□□□ 0.77
ATG4B-221ENST00000483778 TAS1R3Q7RTX0 852 aa19.86■□□□□ 0.77
ATG4B-221ENST00000483778 CEP57Q86XR8 500 aa19.86■□□□□ 0.77
ATG4B-221ENST00000483778 LNX1Q8TBB1 728 aaPredicted RBP19.86■□□□□ 0.77
ATG4B-221ENST00000483778 NOL7Q9UMY1 257 aaKnown RBP19.86■□□□□ 0.77
ATG4B-221ENST00000483778 USP34Q70CQ2 3546 aa19.86■□□□□ 0.77
ATG4B-221ENST00000483778 CD2BP2O95400 341 aaKnown RBP19.85■□□□□ 0.77
ATG4B-221ENST00000483778 PAPLNO95428 1278 aa19.85■□□□□ 0.77
ATG4B-221ENST00000483778 TDGQ13569 410 aa19.85■□□□□ 0.77
ATG4B-221ENST00000483778 GLRA4Q5JXX5 417 aa19.85■□□□□ 0.77
ATG4B-221ENST00000483778 CEP120Q8N960 986 aa19.85■□□□□ 0.77
ATG4B-221ENST00000483778 SNX29Q8TEQ0 813 aa19.85■□□□□ 0.77
ATG4B-221ENST00000483778 RUSC1Q9BVN2 902 aa19.85■□□□□ 0.77
ATG4B-221ENST00000483778 CLUHO75153 1309 aa19.84■□□□□ 0.77
ATG4B-221ENST00000483778 SFI1A8K8P3 1242 aa19.84■□□□□ 0.77
ATG4B-221ENST00000483778 GBP2P32456 591 aaPredicted RBP19.84■□□□□ 0.77
ATG4B-221ENST00000483778 NPTX2P47972 431 aa19.84■□□□□ 0.77
ATG4B-221ENST00000483778 PEX3P56589 373 aa19.84■□□□□ 0.77
ATG4B-221ENST00000483778 MAPK7Q13164 816 aa19.84■□□□□ 0.77
ATG4B-221ENST00000483778 PPP2R5AQ15172 486 aa19.84■□□□□ 0.77
ATG4B-221ENST00000483778 ATF7IP2Q5U623 682 aa19.84■□□□□ 0.77
ATG4B-221ENST00000483778 ASTLQ6HA08 431 aaPredicted RBP19.84■□□□□ 0.77
ATG4B-221ENST00000483778 GPR65Q8IYL9 337 aa19.84■□□□□ 0.77
ATG4B-221ENST00000483778 HDAC7Q8WUI4 952 aa19.84■□□□□ 0.77
ATG4B-221ENST00000483778 IFT74Q96LB3 600 aa19.84■□□□□ 0.77
ATG4B-221ENST00000483778 PRRX2Q99811 253 aa19.84■□□□□ 0.77
ATG4B-221ENST00000483778 TTPALQ9BTX7 342 aa19.84■□□□□ 0.77
ATG4B-221ENST00000483778 PRKD2Q9BZL6 878 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms