RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 STRA6Q9BX79 667 aa19.73■□□□□ 0.75
HDAC6-225ENST00000483506 LRRC27Q9C0I9 530 aa19.73■□□□□ 0.75
HDAC6-225ENST00000483506 GBP3Q9H0R5 595 aa19.73■□□□□ 0.75
HDAC6-225ENST00000483506 NGRNQ9NPE2 291 aaKnown RBP19.73■□□□□ 0.75
HDAC6-225ENST00000483506 OLFML3Q9NRN5 406 aa19.73■□□□□ 0.75
HDAC6-225ENST00000483506 KLK14Q9P0G3 267 aa19.73■□□□□ 0.75
HDAC6-225ENST00000483506 EFEMP2O95967 443 aa19.72■□□□□ 0.75
HDAC6-225ENST00000483506 ALDH2P05091 517 aa19.72■□□□□ 0.75
HDAC6-225ENST00000483506 NMT1P30419 496 aaKnown RBP19.72■□□□□ 0.75
HDAC6-225ENST00000483506 NOLC1Q14978 699 aaKnown RBP eCLIP19.72■□□□□ 0.75
HDAC6-225ENST00000483506 NAB2Q15742 525 aa19.72■□□□□ 0.75
HDAC6-225ENST00000483506 ZNF720Q7Z2F6 126 aa19.72■□□□□ 0.75
HDAC6-225ENST00000483506 DHX58Q96C10 678 aa19.72■□□□□ 0.75
HDAC6-225ENST00000483506 HVCN1Q96D96 273 aa19.72■□□□□ 0.75
HDAC6-225ENST00000483506 PABPC5Q96DU9 382 aaKnown RBP19.72■□□□□ 0.75
HDAC6-225ENST00000483506 ZBTB45Q96K62 511 aaPredicted RBP19.72■□□□□ 0.75
HDAC6-225ENST00000483506 RPS6KC1Q96S38 1066 aa19.72■□□□□ 0.75
HDAC6-225ENST00000483506 ZHX3Q9H4I2 956 aa19.72■□□□□ 0.75
HDAC6-225ENST00000483506 UBE2ZQ9H832 354 aaPredicted RBP19.72■□□□□ 0.75
HDAC6-225ENST00000483506 MARCH5Q9NX47 278 aa19.72■□□□□ 0.75
HDAC6-225ENST00000483506 FAN1Q9Y2M0 1017 aa19.72■□□□□ 0.75
HDAC6-225ENST00000483506 TRIP11Q15643 1979 aa19.72■□□□□ 0.75
HDAC6-225ENST00000483506 CITO14578 2027 aa19.71■□□□□ 0.75
HDAC6-225ENST00000483506 VCANP13611 3396 aa19.71■□□□□ 0.75
HDAC6-225ENST00000483506 FAM237AA0A1B0GTK4 181 aa19.71■□□□□ 0.75
HDAC6-225ENST00000483506 NRP1O14786 923 aa19.71■□□□□ 0.75
HDAC6-225ENST00000483506 POLR2DO15514 142 aaKnown RBP19.71■□□□□ 0.75
HDAC6-225ENST00000483506 CMA1P23946 247 aa19.71■□□□□ 0.75
HDAC6-225ENST00000483506 MRPS5P82675 430 aaKnown RBP19.71■□□□□ 0.75
HDAC6-225ENST00000483506 AMPD3Q01432 767 aa19.71■□□□□ 0.75
HDAC6-225ENST00000483506 ALKAL1Q6UXT8 129 aa19.71■□□□□ 0.75
HDAC6-225ENST00000483506 ADGRD2Q7Z7M1 963 aa19.71■□□□□ 0.75
HDAC6-225ENST00000483506 RNF168Q8IYW5 571 aaPredicted RBP19.71■□□□□ 0.75
HDAC6-225ENST00000483506 CEP120Q8N960 986 aa19.71■□□□□ 0.75
HDAC6-225ENST00000483506 TCF25Q9BQ70 676 aa19.71■□□□□ 0.75
HDAC6-225ENST00000483506 CCDC94Q9BW85 323 aaPredicted RBP19.71■□□□□ 0.75
HDAC6-225ENST00000483506 VN1R3Q9BXE9 311 aa19.71■□□□□ 0.75
HDAC6-225ENST00000483506 TRIM9Q9C026 710 aa19.71■□□□□ 0.75
HDAC6-225ENST00000483506 HAPLN2Q9GZV7 340 aa19.71■□□□□ 0.75
HDAC6-225ENST00000483506 ZBP1Q9H171 429 aa19.71■□□□□ 0.75
HDAC6-225ENST00000483506 CXCL16Q9H2A7 254 aa19.71■□□□□ 0.75
HDAC6-225ENST00000483506 TOPORSQ9NS56 1045 aaPredicted RBP19.71■□□□□ 0.75
HDAC6-225ENST00000483506 GDAQ9Y2T3 454 aa19.71■□□□□ 0.75
HDAC6-225ENST00000483506 PCDHGC5Q9Y5F6 944 aa19.71■□□□□ 0.75
HDAC6-225ENST00000483506 IRAK3Q9Y616 596 aa19.71■□□□□ 0.75
HDAC6-225ENST00000483506 FSD2A1L4K1 749 aa19.7■□□□□ 0.74
HDAC6-225ENST00000483506 CLDN3O15551 220 aa19.7■□□□□ 0.74
HDAC6-225ENST00000483506 THP07101 528 aa19.7■□□□□ 0.74
HDAC6-225ENST00000483506 TUSC3Q13454 348 aa19.7■□□□□ 0.74
HDAC6-225ENST00000483506 AAK1Q2M2I8 961 aa19.7■□□□□ 0.74
HDAC6-225ENST00000483506 ZBTB33Q86T24 672 aa19.7■□□□□ 0.74
HDAC6-225ENST00000483506 BICD1Q96G01 975 aa19.7■□□□□ 0.74
HDAC6-225ENST00000483506 ASB2Q96Q27 587 aa19.7■□□□□ 0.74
HDAC6-225ENST00000483506 PPP1R10Q96QC0 940 aaKnown RBP19.7■□□□□ 0.74
HDAC6-225ENST00000483506 CDCA3Q99618 268 aaPredicted RBP19.7■□□□□ 0.74
HDAC6-225ENST00000483506 C7orf25Q9BPX7 421 aa19.7■□□□□ 0.74
HDAC6-225ENST00000483506 TCHPQ9BT92 498 aa19.7■□□□□ 0.74
HDAC6-225ENST00000483506 ANKFY1Q9P2R3 1169 aa19.7■□□□□ 0.74
HDAC6-225ENST00000483506 KCNH3Q9ULD8 1083 aa19.7■□□□□ 0.74
HDAC6-225ENST00000483506 HPSEQ9Y251 543 aa19.7■□□□□ 0.74
HDAC6-225ENST00000483506 PDCD11Q14690 1871 aaKnown RBP19.69■□□□□ 0.74
HDAC6-225ENST00000483506 HNRNPDLO14979 420 aaKnown RBP19.69■□□□□ 0.74
HDAC6-225ENST00000483506 NR1I2O75469 434 aa19.69■□□□□ 0.74
HDAC6-225ENST00000483506 CSPG5O95196 566 aa19.69■□□□□ 0.74
HDAC6-225ENST00000483506 CTSAP10619 480 aa19.69■□□□□ 0.74
HDAC6-225ENST00000483506 LIG4P49917 911 aa19.69■□□□□ 0.74
HDAC6-225ENST00000483506 YARSP54577 528 aaKnown RBP19.69■□□□□ 0.74
HDAC6-225ENST00000483506 TFF2Q03403 129 aa19.69■□□□□ 0.74
HDAC6-225ENST00000483506 ALCAMQ13740 583 aa19.69■□□□□ 0.74
HDAC6-225ENST00000483506 SMC1AQ14683 1233 aaKnown RBP19.69■□□□□ 0.74
HDAC6-225ENST00000483506 ZC2HC1CQ53FD0 456 aaPredicted RBP19.69■□□□□ 0.74
HDAC6-225ENST00000483506 SLC39A4Q6P5W5 647 aa19.69■□□□□ 0.74
HDAC6-225ENST00000483506 VPS52Q8N1B4 723 aa19.69■□□□□ 0.74
HDAC6-225ENST00000483506 EFHBQ8N7U6 833 aa19.69■□□□□ 0.74
HDAC6-225ENST00000483506 MICAL1Q8TDZ2 1067 aa19.69■□□□□ 0.74
HDAC6-225ENST00000483506 SNX27Q96L92 541 aa19.69■□□□□ 0.74
HDAC6-225ENST00000483506 ACAP3Q96P50 834 aa19.69■□□□□ 0.74
HDAC6-225ENST00000483506 MRPL44Q9H9J2 332 aaKnown RBP19.69■□□□□ 0.74
HDAC6-225ENST00000483506 ENTPD7Q9NQZ7 604 aa19.69■□□□□ 0.74
HDAC6-225ENST00000483506 PANK4Q9NVE7 773 aa19.69■□□□□ 0.74
HDAC6-225ENST00000483506 A0A0B4J269 797 aa19.68■□□□□ 0.74
HDAC6-225ENST00000483506 A0A1W2PQ27 194 aa19.68■□□□□ 0.74
HDAC6-225ENST00000483506 A0A1W2PQ64 194 aa19.68■□□□□ 0.74
HDAC6-225ENST00000483506 A0A1W2PQD8 194 aa19.68■□□□□ 0.74
HDAC6-225ENST00000483506 C2orf71A6NGG8 1288 aa19.68■□□□□ 0.74
HDAC6-225ENST00000483506 MEFVO15553 781 aaPredicted RBP19.68■□□□□ 0.74
HDAC6-225ENST00000483506 FAM189A1O60320 539 aa19.68■□□□□ 0.74
HDAC6-225ENST00000483506 IDEP14735 1019 aa19.68■□□□□ 0.74
HDAC6-225ENST00000483506 KCNE1P15382 129 aa19.68■□□□□ 0.74
HDAC6-225ENST00000483506 PFKFB1P16118 471 aa19.68■□□□□ 0.74
HDAC6-225ENST00000483506 GTF2F1P35269 517 aaKnown RBP eCLIP19.68■□□□□ 0.74
HDAC6-225ENST00000483506 LTBRP36941 435 aa19.68■□□□□ 0.74
HDAC6-225ENST00000483506 OR1G1P47890 313 aa19.68■□□□□ 0.74
HDAC6-225ENST00000483506 COASYQ13057 564 aa19.68■□□□□ 0.74
HDAC6-225ENST00000483506 ADAM15Q13444 863 aa19.68■□□□□ 0.74
HDAC6-225ENST00000483506 DUSP6Q16828 381 aa19.68■□□□□ 0.74
HDAC6-225ENST00000483506 LEXMQ3ZCV2 418 aa19.68■□□□□ 0.74
HDAC6-225ENST00000483506 HERC4Q5GLZ8 1057 aaPredicted RBP19.68■□□□□ 0.74
HDAC6-225ENST00000483506 TJAP1Q5JTD0 557 aa19.68■□□□□ 0.74
HDAC6-225ENST00000483506 PLPP4Q5VZY2 271 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms