RNA–Protein interactions for RNA: ENST00000483159.1

MRPL55-229, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-229	ENST00000483159	B4GALT3	O60512	393 aa		13.54	□□□□□ -0.24
MRPL55-229	ENST00000483159	RECQL4	O94761	1208 aa		13.54	□□□□□ -0.24
MRPL55-229	ENST00000483159	PIGR	P01833	764 aa		13.54	□□□□□ -0.24
MRPL55-229	ENST00000483159	TH	P07101	528 aa		13.54	□□□□□ -0.24
MRPL55-229	ENST00000483159	CMA1	P23946	247 aa		13.54	□□□□□ -0.24
MRPL55-229	ENST00000483159	YARS	P54577	528 aa	Known RBP	13.54	□□□□□ -0.24
MRPL55-229	ENST00000483159	MCL1	Q07820	350 aa		13.54	□□□□□ -0.24
MRPL55-229	ENST00000483159	TUSC3	Q13454	348 aa		13.54	□□□□□ -0.24
MRPL55-229	ENST00000483159	KYAT1	Q16773	422 aa		13.54	□□□□□ -0.24
MRPL55-229	ENST00000483159	TJAP1	Q5JTD0	557 aa		13.54	□□□□□ -0.24
MRPL55-229	ENST00000483159	ADAL	Q6DHV7	355 aa		13.54	□□□□□ -0.24
MRPL55-229	ENST00000483159	CNNM4	Q6P4Q7	775 aa		13.54	□□□□□ -0.24
MRPL55-229	ENST00000483159	ZNF720	Q7Z2F6	126 aa		13.54	□□□□□ -0.24
MRPL55-229	ENST00000483159	MRPL43	Q8N983	215 aa	Known RBP	13.54	□□□□□ -0.24
MRPL55-229	ENST00000483159	LEO1	Q8WVC0	666 aa	Predicted RBP	13.54	□□□□□ -0.24
MRPL55-229	ENST00000483159	HVCN1	Q96D96	273 aa		13.54	□□□□□ -0.24
MRPL55-229	ENST00000483159	COLEC11	Q9BWP8	271 aa		13.54	□□□□□ -0.24
MRPL55-229	ENST00000483159	TLE6	Q9H808	572 aa		13.54	□□□□□ -0.24
MRPL55-229	ENST00000483159	UBE2Z	Q9H832	354 aa	Predicted RBP	13.54	□□□□□ -0.24
MRPL55-229	ENST00000483159	OLFML3	Q9NRN5	406 aa		13.54	□□□□□ -0.24
MRPL55-229	ENST00000483159	GDA	Q9Y2T3	454 aa		13.54	□□□□□ -0.24
MRPL55-229	ENST00000483159	UNC80	Q8N2C7	3258 aa		13.54	□□□□□ -0.24
MRPL55-229	ENST00000483159	NLRC5	Q86WI3	1866 aa		13.53	□□□□□ -0.24
MRPL55-229	ENST00000483159	FRMD3	A2A2Y4	597 aa		13.53	□□□□□ -0.24
MRPL55-229	ENST00000483159	PTGES	O14684	152 aa		13.53	□□□□□ -0.24
MRPL55-229	ENST00000483159	POLR2D	O15514	142 aa	Known RBP	13.53	□□□□□ -0.24
MRPL55-229	ENST00000483159	NMT1	P30419	496 aa	Known RBP	13.53	□□□□□ -0.24
MRPL55-229	ENST00000483159	OR1G1	P47890	313 aa		13.53	□□□□□ -0.24
MRPL55-229	ENST00000483159	LIG4	P49917	911 aa		13.53	□□□□□ -0.24
MRPL55-229	ENST00000483159	ADAM15	Q13444	863 aa		13.53	□□□□□ -0.24
MRPL55-229	ENST00000483159	SMC1A	Q14683	1233 aa	Known RBP	13.53	□□□□□ -0.24
MRPL55-229	ENST00000483159	LEXM	Q3ZCV2	418 aa		13.53	□□□□□ -0.24
MRPL55-229	ENST00000483159	XKR4	Q5GH76	650 aa		13.53	□□□□□ -0.24
MRPL55-229	ENST00000483159	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.53	□□□□□ -0.24
MRPL55-229	ENST00000483159	ALKAL1	Q6UXT8	129 aa		13.53	□□□□□ -0.24
MRPL55-229	ENST00000483159	ZBTB33	Q86T24	672 aa		13.53	□□□□□ -0.24
MRPL55-229	ENST00000483159	TMEM173	Q86WV6	379 aa	Predicted RBP	13.53	□□□□□ -0.24
MRPL55-229	ENST00000483159	MAP4K3	Q8IVH8	894 aa		13.53	□□□□□ -0.24
MRPL55-229	ENST00000483159	VPS52	Q8N1B4	723 aa		13.53	□□□□□ -0.24
MRPL55-229	ENST00000483159	EFHB	Q8N7U6	833 aa		13.53	□□□□□ -0.24
MRPL55-229	ENST00000483159	DHX58	Q96C10	678 aa		13.53	□□□□□ -0.24
MRPL55-229	ENST00000483159	BICD1	Q96G01	975 aa		13.53	□□□□□ -0.24
MRPL55-229	ENST00000483159	ACAP3	Q96P50	834 aa		13.53	□□□□□ -0.24
MRPL55-229	ENST00000483159	ENTPD7	Q9NQZ7	604 aa		13.53	□□□□□ -0.24
MRPL55-229	ENST00000483159	KCNH3	Q9ULD8	1083 aa		13.53	□□□□□ -0.24
MRPL55-229	ENST00000483159	IRAK3	Q9Y616	596 aa		13.53	□□□□□ -0.24
MRPL55-229	ENST00000483159	HNRNPDL	O14979	420 aa	Known RBP	13.52	□□□□□ -0.25
MRPL55-229	ENST00000483159	CXCL14	O95715	111 aa		13.52	□□□□□ -0.25
MRPL55-229	ENST00000483159	EFEMP2	O95967	443 aa		13.52	□□□□□ -0.25
MRPL55-229	ENST00000483159	CTSA	P10619	480 aa		13.52	□□□□□ -0.25
MRPL55-229	ENST00000483159	IDE	P14735	1019 aa		13.52	□□□□□ -0.25
MRPL55-229	ENST00000483159	NRIP1	P48552	1158 aa		13.52	□□□□□ -0.25
MRPL55-229	ENST00000483159	TFF2	Q03403	129 aa		13.52	□□□□□ -0.25
MRPL55-229	ENST00000483159	ALCAM	Q13740	583 aa		13.52	□□□□□ -0.25
MRPL55-229	ENST00000483159	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
MRPL55-229	ENST00000483159	DUSP6	Q16828	381 aa		13.52	□□□□□ -0.25
MRPL55-229	ENST00000483159	PUS10	Q3MIT2	529 aa	Known RBP	13.52	□□□□□ -0.25
MRPL55-229	ENST00000483159	SLFN12L	Q6IEE8	588 aa		13.52	□□□□□ -0.25
MRPL55-229	ENST00000483159	ADGRD2	Q7Z7M1	963 aa		13.52	□□□□□ -0.25
MRPL55-229	ENST00000483159	SFR1	Q86XK3	245 aa		13.52	□□□□□ -0.25
MRPL55-229	ENST00000483159	CCDC65	Q8IXS2	484 aa		13.52	□□□□□ -0.25
MRPL55-229	ENST00000483159	BCL7C	Q8WUZ0	217 aa	Predicted RBP	13.52	□□□□□ -0.25
MRPL55-229	ENST00000483159	ZBTB45	Q96K62	511 aa	Predicted RBP	13.52	□□□□□ -0.25
MRPL55-229	ENST00000483159	C7orf25	Q9BPX7	421 aa		13.52	□□□□□ -0.25
MRPL55-229	ENST00000483159	STRA6	Q9BX79	667 aa		13.52	□□□□□ -0.25
MRPL55-229	ENST00000483159	TRIM9	Q9C026	710 aa		13.52	□□□□□ -0.25
MRPL55-229	ENST00000483159	ZBP1	Q9H171	429 aa		13.52	□□□□□ -0.25
MRPL55-229	ENST00000483159	IGFLR1	Q9H665	355 aa		13.52	□□□□□ -0.25
MRPL55-229	ENST00000483159	MRPL44	Q9H9J2	332 aa	Known RBP	13.52	□□□□□ -0.25
MRPL55-229	ENST00000483159	SLC38A7	Q9NVC3	462 aa		13.52	□□□□□ -0.25
MRPL55-229	ENST00000483159	PANK4	Q9NVE7	773 aa		13.52	□□□□□ -0.25
MRPL55-229	ENST00000483159	CLDND1	Q9NY35	253 aa		13.52	□□□□□ -0.25
MRPL55-229	ENST00000483159	ANKFY1	Q9P2R3	1169 aa		13.52	□□□□□ -0.25
MRPL55-229	ENST00000483159	SSX2IP	Q9Y2D8	614 aa		13.52	□□□□□ -0.25
MRPL55-229	ENST00000483159	PCDHB13	Q9Y5F0	798 aa		13.52	□□□□□ -0.25
MRPL55-229	ENST00000483159		A0A0B4J269	797 aa		13.51	□□□□□ -0.25
MRPL55-229	ENST00000483159	SMIM28	A0A1B0GU29	152 aa		13.51	□□□□□ -0.25
MRPL55-229	ENST00000483159	C2orf71	A6NGG8	1288 aa		13.51	□□□□□ -0.25
MRPL55-229	ENST00000483159	PPP1R37	O75864	691 aa		13.51	□□□□□ -0.25
MRPL55-229	ENST00000483159	CSPG5	O95196	566 aa		13.51	□□□□□ -0.25
MRPL55-229	ENST00000483159	CLTA	P09496	248 aa		13.51	□□□□□ -0.25
MRPL55-229	ENST00000483159	SLFN14	P0C7P3	912 aa		13.51	□□□□□ -0.25
MRPL55-229	ENST00000483159	BMP1	P13497	986 aa		13.51	□□□□□ -0.25
MRPL55-229	ENST00000483159	KCNE1	P15382	129 aa		13.51	□□□□□ -0.25
MRPL55-229	ENST00000483159	KCNA5	P22460	613 aa		13.51	□□□□□ -0.25
MRPL55-229	ENST00000483159	MATR3	P43243	847 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
MRPL55-229	ENST00000483159	NAB2	Q15742	525 aa		13.51	□□□□□ -0.25
MRPL55-229	ENST00000483159	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	13.51	□□□□□ -0.25
MRPL55-229	ENST00000483159	PLPP4	Q5VZY2	271 aa		13.51	□□□□□ -0.25
MRPL55-229	ENST00000483159	TMEM184A	Q6ZMB5	413 aa		13.51	□□□□□ -0.25
MRPL55-229	ENST00000483159	RBM23	Q86U06	439 aa	Known RBP	13.51	□□□□□ -0.25
MRPL55-229	ENST00000483159	GPR65	Q8IYL9	337 aa		13.51	□□□□□ -0.25
MRPL55-229	ENST00000483159	CEP120	Q8N960	986 aa		13.51	□□□□□ -0.25
MRPL55-229	ENST00000483159	UROC1	Q96N76	676 aa		13.51	□□□□□ -0.25
MRPL55-229	ENST00000483159	PPP1R10	Q96QC0	940 aa	Known RBP	13.51	□□□□□ -0.25
MRPL55-229	ENST00000483159	TSPAN18	Q96SJ8	248 aa		13.51	□□□□□ -0.25
MRPL55-229	ENST00000483159	PLEKHA5	Q9HAU0	1116 aa		13.51	□□□□□ -0.25
MRPL55-229	ENST00000483159	MARCH5	Q9NX47	278 aa		13.51	□□□□□ -0.25
MRPL55-229	ENST00000483159	USP25	Q9UHP3	1055 aa		13.51	□□□□□ -0.25
MRPL55-229	ENST00000483159	EXOC7	Q9UPT5	735 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms