RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 TP53BP2Q13625 1128 aa4.44□□□□□ -1.7
LAPTM4A-202ENST00000483117 UGT8Q16880 541 aa4.44□□□□□ -1.7
LAPTM4A-202ENST00000483117 FAM102AQ5T9C2 384 aaPredicted RBP4.44□□□□□ -1.7
LAPTM4A-202ENST00000483117 HDGFL2Q7Z4V5 671 aaPredicted RBP4.44□□□□□ -1.7
LAPTM4A-202ENST00000483117 FBXO18Q8NFZ0 1043 aa4.44□□□□□ -1.7
LAPTM4A-202ENST00000483117 ZNF480Q8WV37 535 aa4.44□□□□□ -1.7
LAPTM4A-202ENST00000483117 VOPP1Q96AW1 172 aa4.44□□□□□ -1.7
LAPTM4A-202ENST00000483117 PHACTR3Q96KR7 559 aa4.44□□□□□ -1.7
LAPTM4A-202ENST00000483117 SYBUQ9NX95 663 aa4.44□□□□□ -1.7
LAPTM4A-202ENST00000483117 DPP7Q9UHL4 492 aa4.44□□□□□ -1.7
LAPTM4A-202ENST00000483117 WNT10BO00744 389 aa4.43□□□□□ -1.7
LAPTM4A-202ENST00000483117 NEMP1O14524 444 aa4.43□□□□□ -1.7
LAPTM4A-202ENST00000483117 GASTP01350 101 aa4.43□□□□□ -1.7
LAPTM4A-202ENST00000483117 SPATA31D3P0C874 917 aa4.43□□□□□ -1.7
LAPTM4A-202ENST00000483117 MGAT1P26572 445 aa4.43□□□□□ -1.7
LAPTM4A-202ENST00000483117 ADSLP30566 484 aaPredicted RBP4.43□□□□□ -1.7
LAPTM4A-202ENST00000483117 PTPN7P35236 360 aa4.43□□□□□ -1.7
LAPTM4A-202ENST00000483117 CLK3P49761 638 aaKnown RBP4.43□□□□□ -1.7
LAPTM4A-202ENST00000483117 CHN2P52757 468 aa4.43□□□□□ -1.7
LAPTM4A-202ENST00000483117 GUCY1B3Q02153 619 aa4.43□□□□□ -1.7
LAPTM4A-202ENST00000483117 TAP1Q03518 808 aa4.43□□□□□ -1.7
LAPTM4A-202ENST00000483117 SPATA31D4Q6ZUB0 917 aa4.43□□□□□ -1.7
LAPTM4A-202ENST00000483117 PDZD4Q76G19 769 aaPredicted RBP4.43□□□□□ -1.7
LAPTM4A-202ENST00000483117 PRIMA1Q86XR5 153 aa4.43□□□□□ -1.7
LAPTM4A-202ENST00000483117 CLRN3Q8NCR9 226 aa4.43□□□□□ -1.7
LAPTM4A-202ENST00000483117 NTN5Q8WTR8 489 aaPredicted RBP4.43□□□□□ -1.7
LAPTM4A-202ENST00000483117 ASB10Q8WXI3 467 aa4.43□□□□□ -1.7
LAPTM4A-202ENST00000483117 BBC3Q96PG8 261 aaPredicted RBP4.43□□□□□ -1.7
LAPTM4A-202ENST00000483117 PTGFRNQ9P2B2 879 aa4.43□□□□□ -1.7
LAPTM4A-202ENST00000483117 TNFRSF18Q9Y5U5 241 aa4.43□□□□□ -1.7
LAPTM4A-202ENST00000483117 EPN1Q9Y6I3 576 aaPredicted RBP4.43□□□□□ -1.7
LAPTM4A-202ENST00000483117 RPTORQ8N122 1335 aa4.43□□□□□ -1.7
LAPTM4A-202ENST00000483117 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.42□□□□□ -1.7
LAPTM4A-202ENST00000483117 PIPSLA2A3N6 862 aa4.42□□□□□ -1.7
LAPTM4A-202ENST00000483117 DRGXA6NNA5 263 aa4.42□□□□□ -1.7
LAPTM4A-202ENST00000483117 CXorf49A8MYA2 514 aaPredicted RBP4.42□□□□□ -1.7
LAPTM4A-202ENST00000483117 AKR1B10O60218 316 aa4.42□□□□□ -1.7
LAPTM4A-202ENST00000483117 SPDEFO95238 335 aa4.42□□□□□ -1.7
LAPTM4A-202ENST00000483117 FBLP22087 321 aaKnown RBP4.42□□□□□ -1.7
LAPTM4A-202ENST00000483117 DDX6P26196 483 aaKnown RBP eCLIP4.42□□□□□ -1.7
LAPTM4A-202ENST00000483117 CRHR1P34998 444 aa4.42□□□□□ -1.7
LAPTM4A-202ENST00000483117 PLA2G5P39877 138 aa4.42□□□□□ -1.7
LAPTM4A-202ENST00000483117 IL12RB1P42701 662 aa4.42□□□□□ -1.7
LAPTM4A-202ENST00000483117 FLT3LGP49771 235 aa4.42□□□□□ -1.7
LAPTM4A-202ENST00000483117 FOXI1Q12951 378 aa4.42□□□□□ -1.7
LAPTM4A-202ENST00000483117 RESTQ13127 1097 aa4.42□□□□□ -1.7
LAPTM4A-202ENST00000483117 FSCN1Q16658 493 aaKnown RBP4.42□□□□□ -1.7
LAPTM4A-202ENST00000483117 CCDC142Q17RM4 750 aa4.42□□□□□ -1.7
LAPTM4A-202ENST00000483117 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.42□□□□□ -1.7
LAPTM4A-202ENST00000483117 MST1LQ2TV78 715 aa4.42□□□□□ -1.7
LAPTM4A-202ENST00000483117 FAM47AQ5JRC9 791 aa4.42□□□□□ -1.7
LAPTM4A-202ENST00000483117 ATXN7L2Q5T6C5 722 aaPredicted RBP4.42□□□□□ -1.7
LAPTM4A-202ENST00000483117 STRIP1Q5VSL9 837 aa4.42□□□□□ -1.7
LAPTM4A-202ENST00000483117 ADGRG3Q86Y34 549 aa4.42□□□□□ -1.7
LAPTM4A-202ENST00000483117 CMIPQ8IY22 773 aa4.42□□□□□ -1.7
LAPTM4A-202ENST00000483117 UBR7Q8N806 425 aa4.42□□□□□ -1.7
LAPTM4A-202ENST00000483117 ZFP28Q8NHY6 868 aa4.42□□□□□ -1.7
LAPTM4A-202ENST00000483117 RIN2Q8WYP3 895 aaPredicted RBP4.42□□□□□ -1.7
LAPTM4A-202ENST00000483117 CAVIN3Q969G5 261 aa4.42□□□□□ -1.7
LAPTM4A-202ENST00000483117 ZNF764Q96H86 408 aaPredicted RBP4.42□□□□□ -1.7
LAPTM4A-202ENST00000483117 PRDM13Q9H4Q3 707 aa4.42□□□□□ -1.7
LAPTM4A-202ENST00000483117 IFT22Q9H7X7 185 aa4.42□□□□□ -1.7
LAPTM4A-202ENST00000483117 MAPRE3Q9UPY8 281 aa4.42□□□□□ -1.7
LAPTM4A-202ENST00000483117 HLA-DOAP06340 250 aa4.41□□□□□ -1.7
LAPTM4A-202ENST00000483117 ENPP1P22413 925 aa4.41□□□□□ -1.7
LAPTM4A-202ENST00000483117 AVPR1BP47901 424 aa4.41□□□□□ -1.7
LAPTM4A-202ENST00000483117 SEC24CP53992 1094 aa4.41□□□□□ -1.7
LAPTM4A-202ENST00000483117 CLRN1P58418 232 aa4.41□□□□□ -1.7
LAPTM4A-202ENST00000483117 RAP2BP61225 183 aa4.41□□□□□ -1.7
LAPTM4A-202ENST00000483117 STRN3Q13033 797 aa4.41□□□□□ -1.7
LAPTM4A-202ENST00000483117 DHCR24Q15392 516 aa4.41□□□□□ -1.7
LAPTM4A-202ENST00000483117 STRA8Q7Z7C7 330 aa4.41□□□□□ -1.7
LAPTM4A-202ENST00000483117 RNF180Q86T96 592 aa4.41□□□□□ -1.7
LAPTM4A-202ENST00000483117 TRMT2AQ8IZ69 625 aaKnown RBP4.41□□□□□ -1.7
LAPTM4A-202ENST00000483117 TSPEARQ8WU66 669 aa4.41□□□□□ -1.7
LAPTM4A-202ENST00000483117 TGFBRAP1Q8WUH2 860 aa4.41□□□□□ -1.7
LAPTM4A-202ENST00000483117 LINC00476Q8WZB0 136 aa4.41□□□□□ -1.7
LAPTM4A-202ENST00000483117 ACAP3Q96P50 834 aa4.41□□□□□ -1.7
LAPTM4A-202ENST00000483117 FPGT-TNNI3KV9GXZ4 949 aa4.41□□□□□ -1.7
LAPTM4A-202ENST00000483117 PNPLA7Q6ZV29 1317 aa4.41□□□□□ -1.7
LAPTM4A-202ENST00000483117 MARCH11A6NNE9 402 aa4.4□□□□□ -1.71
LAPTM4A-202ENST00000483117 ENPP3O14638 875 aa4.4□□□□□ -1.71
LAPTM4A-202ENST00000483117 PHF2O75151 1096 aa4.4□□□□□ -1.71
LAPTM4A-202ENST00000483117 ULK1O75385 1050 aa4.4□□□□□ -1.71
LAPTM4A-202ENST00000483117 ELANEP08246 267 aa4.4□□□□□ -1.71
LAPTM4A-202ENST00000483117 HKR1P10072 659 aa4.4□□□□□ -1.71
LAPTM4A-202ENST00000483117 EGR2P11161 476 aaPredicted RBP4.4□□□□□ -1.71
LAPTM4A-202ENST00000483117 TYRP1P17643 537 aa4.4□□□□□ -1.71
LAPTM4A-202ENST00000483117 PTH2RP49190 550 aa4.4□□□□□ -1.71
LAPTM4A-202ENST00000483117 GYS2P54840 703 aa4.4□□□□□ -1.71
LAPTM4A-202ENST00000483117 SESN3P58005 492 aa4.4□□□□□ -1.71
LAPTM4A-202ENST00000483117 KRTAP10-7P60409 375 aaPredicted RBP4.4□□□□□ -1.71
LAPTM4A-202ENST00000483117 AGAP9Q5VTM2 703 aa4.4□□□□□ -1.71
LAPTM4A-202ENST00000483117 Q6ZVL8 140 aa4.4□□□□□ -1.71
LAPTM4A-202ENST00000483117 MED25Q71SY5 747 aa4.4□□□□□ -1.71
LAPTM4A-202ENST00000483117 ZNF572Q7Z3I7 529 aaPredicted RBP4.4□□□□□ -1.71
LAPTM4A-202ENST00000483117 OR7D4Q8NG98 312 aa4.4□□□□□ -1.71
LAPTM4A-202ENST00000483117 OR56A1Q8NGH5 318 aa4.4□□□□□ -1.71
LAPTM4A-202ENST00000483117 RAX2Q96IS3 184 aa4.4□□□□□ -1.71
LAPTM4A-202ENST00000483117 PAWRQ96IZ0 340 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms