RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 MYMKA6NI61 221 aa16.56■□□□□ 0.24
COL16A1-213ENST00000482910 K7ENM7 598 aa16.56■□□□□ 0.24
COL16A1-213ENST00000482910 PTGESO14684 152 aa16.56■□□□□ 0.24
COL16A1-213ENST00000482910 THP07101 528 aa16.56■□□□□ 0.24
COL16A1-213ENST00000482910 BMP1P13497 986 aa16.56■□□□□ 0.24
COL16A1-213ENST00000482910 GAP43P17677 238 aa16.56■□□□□ 0.24
COL16A1-213ENST00000482910 KCNA5P22460 613 aa16.56■□□□□ 0.24
COL16A1-213ENST00000482910 LTBRP36941 435 aa16.56■□□□□ 0.24
COL16A1-213ENST00000482910 ME1P48163 572 aa16.56■□□□□ 0.24
COL16A1-213ENST00000482910 KRT85P78386 507 aa16.56■□□□□ 0.24
COL16A1-213ENST00000482910 GTF2BQ00403 316 aa16.56■□□□□ 0.24
COL16A1-213ENST00000482910 MCL1Q07820 350 aa16.56■□□□□ 0.24
COL16A1-213ENST00000482910 TUSC3Q13454 348 aa16.56■□□□□ 0.24
COL16A1-213ENST00000482910 NOLC1Q14978 699 aaKnown RBP eCLIP16.56■□□□□ 0.24
COL16A1-213ENST00000482910 E2F4Q16254 413 aa16.56■□□□□ 0.24
COL16A1-213ENST00000482910 FOXD4L6Q3SYB3 417 aaPredicted RBP16.56■□□□□ 0.24
COL16A1-213ENST00000482910 XKR4Q5GH76 650 aa16.56■□□□□ 0.24
COL16A1-213ENST00000482910 PLPP4Q5VZY2 271 aa16.56■□□□□ 0.24
COL16A1-213ENST00000482910 FOXD4L3Q6VB84 417 aaPredicted RBP16.56■□□□□ 0.24
COL16A1-213ENST00000482910 VPS52Q8N1B4 723 aa16.56■□□□□ 0.24
COL16A1-213ENST00000482910 MRPL43Q8N983 215 aaKnown RBP16.56■□□□□ 0.24
COL16A1-213ENST00000482910 IQUBQ8NA54 791 aa16.56■□□□□ 0.24
COL16A1-213ENST00000482910 BCL7CQ8WUZ0 217 aaPredicted RBP16.56■□□□□ 0.24
COL16A1-213ENST00000482910 HVCN1Q96D96 273 aa16.56■□□□□ 0.24
COL16A1-213ENST00000482910 PYM1Q9BRP8 204 aaKnown RBP16.56■□□□□ 0.24
COL16A1-213ENST00000482910 COLEC11Q9BWP8 271 aa16.56■□□□□ 0.24
COL16A1-213ENST00000482910 LRRC27Q9C0I9 530 aa16.56■□□□□ 0.24
COL16A1-213ENST00000482910 MAGEF1Q9HAY2 307 aa16.56■□□□□ 0.24
COL16A1-213ENST00000482910 TOPORSQ9NS56 1045 aaPredicted RBP16.56■□□□□ 0.24
COL16A1-213ENST00000482910 KBTBD4Q9NVX7 518 aa16.56■□□□□ 0.24
COL16A1-213ENST00000482910 MARCH5Q9NX47 278 aa16.56■□□□□ 0.24
COL16A1-213ENST00000482910 CLDND1Q9NY35 253 aa16.56■□□□□ 0.24
COL16A1-213ENST00000482910 TBX20Q9UMR3 447 aa16.56■□□□□ 0.24
COL16A1-213ENST00000482910 PCDHA7Q9UN72 937 aa16.56■□□□□ 0.24
COL16A1-213ENST00000482910 PCDHGC5Q9Y5F6 944 aa16.56■□□□□ 0.24
COL16A1-213ENST00000482910 NCOR1O75376 2440 aa16.56■□□□□ 0.24
COL16A1-213ENST00000482910 TCHHQ07283 1943 aa16.55■□□□□ 0.24
COL16A1-213ENST00000482910 FRMD3A2A2Y4 597 aa16.55■□□□□ 0.24
COL16A1-213ENST00000482910 CSPG5O95196 566 aa16.55■□□□□ 0.24
COL16A1-213ENST00000482910 EFEMP2O95967 443 aa16.55■□□□□ 0.24
COL16A1-213ENST00000482910 OR1G1P47890 313 aa16.55■□□□□ 0.24
COL16A1-213ENST00000482910 NRIP1P48552 1158 aa16.55■□□□□ 0.24
COL16A1-213ENST00000482910 YARSP54577 528 aaKnown RBP16.55■□□□□ 0.24
COL16A1-213ENST00000482910 RESP18Q5W5W9 173 aa16.55■□□□□ 0.24
COL16A1-213ENST00000482910 TMEM184AQ6ZMB5 413 aa16.55■□□□□ 0.24
COL16A1-213ENST00000482910 DYMQ7RTS9 669 aa16.55■□□□□ 0.24
COL16A1-213ENST00000482910 MAP4K3Q8IVH8 894 aa16.55■□□□□ 0.24
COL16A1-213ENST00000482910 RNF168Q8IYW5 571 aaPredicted RBP16.55■□□□□ 0.24
COL16A1-213ENST00000482910 PDILTQ8N807 584 aa16.55■□□□□ 0.24
COL16A1-213ENST00000482910 TCHPQ9BT92 498 aa16.55■□□□□ 0.24
COL16A1-213ENST00000482910 PANK2Q9BZ23 570 aa16.55■□□□□ 0.24
COL16A1-213ENST00000482910 ZHX3Q9H4I2 956 aa16.55■□□□□ 0.24
COL16A1-213ENST00000482910 OLFML3Q9NRN5 406 aa16.55■□□□□ 0.24
COL16A1-213ENST00000482910 GDAQ9Y2T3 454 aa16.55■□□□□ 0.24
COL16A1-213ENST00000482910 TTC28Q96AY4 2481 aa16.55■□□□□ 0.24
COL16A1-213ENST00000482910 SPTBN5Q9NRC6 3674 aaKnown RBP16.54■□□□□ 0.24
COL16A1-213ENST00000482910 C2orf71A6NGG8 1288 aa16.54■□□□□ 0.24
COL16A1-213ENST00000482910 HIDE1A8MVS5 230 aa16.54■□□□□ 0.24
COL16A1-213ENST00000482910 CLDN3O15551 220 aa16.54■□□□□ 0.24
COL16A1-213ENST00000482910 SOD2P04179 222 aa16.54■□□□□ 0.24
COL16A1-213ENST00000482910 GTF2F1P35269 517 aaKnown RBP eCLIP16.54■□□□□ 0.24
COL16A1-213ENST00000482910 KCNQ1P51787 676 aa16.54■□□□□ 0.24
COL16A1-213ENST00000482910 AMPD3Q01432 767 aa16.54■□□□□ 0.24
COL16A1-213ENST00000482910 KCNC3Q14003 757 aa16.54■□□□□ 0.24
COL16A1-213ENST00000482910 NAB2Q15742 525 aa16.54■□□□□ 0.24
COL16A1-213ENST00000482910 KYAT1Q16773 422 aa16.54■□□□□ 0.24
COL16A1-213ENST00000482910 CNNM4Q6P4Q7 775 aa16.54■□□□□ 0.24
COL16A1-213ENST00000482910 ALKAL1Q6UXT8 129 aa16.54■□□□□ 0.24
COL16A1-213ENST00000482910 ZNF720Q7Z2F6 126 aa16.54■□□□□ 0.24
COL16A1-213ENST00000482910 SFR1Q86XK3 245 aa16.54■□□□□ 0.24
COL16A1-213ENST00000482910 GPR65Q8IYL9 337 aa16.54■□□□□ 0.24
COL16A1-213ENST00000482910 CEP120Q8N960 986 aa16.54■□□□□ 0.24
COL16A1-213ENST00000482910 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.54■□□□□ 0.24
COL16A1-213ENST00000482910 BICD1Q96G01 975 aa16.54■□□□□ 0.24
COL16A1-213ENST00000482910 ZBTB45Q96K62 511 aaPredicted RBP16.54■□□□□ 0.24
COL16A1-213ENST00000482910 ACAP3Q96P50 834 aa16.54■□□□□ 0.24
COL16A1-213ENST00000482910 VN1R3Q9BXE9 311 aa16.54■□□□□ 0.24
COL16A1-213ENST00000482910 COL25A1Q9BXS0 654 aaPredicted RBP16.54■□□□□ 0.24
COL16A1-213ENST00000482910 IGFLR1Q9H665 355 aa16.54■□□□□ 0.24
COL16A1-213ENST00000482910 FAM13BQ9NYF5 915 aa16.54■□□□□ 0.24
COL16A1-213ENST00000482910 SSX2IPQ9Y2D8 614 aa16.54■□□□□ 0.24
COL16A1-213ENST00000482910 PRG3Q9Y2Y8 225 aaPredicted RBP16.54■□□□□ 0.24
COL16A1-213ENST00000482910 XIRP2A4UGR9 3374 aa16.54■□□□□ 0.24
COL16A1-213ENST00000482910 HNRNPDLO14979 420 aaKnown RBP16.53■□□□□ 0.24
COL16A1-213ENST00000482910 TBX10O75333 385 aa16.53■□□□□ 0.24
COL16A1-213ENST00000482910 PPP1R37O75864 691 aa16.53■□□□□ 0.24
COL16A1-213ENST00000482910 CXCL14O95715 111 aa16.53■□□□□ 0.24
COL16A1-213ENST00000482910 GLP2RO95838 553 aa16.53■□□□□ 0.24
COL16A1-213ENST00000482910 SRGAP2BP0DMP2 458 aa16.53■□□□□ 0.24
COL16A1-213ENST00000482910 NMT1P30419 496 aaKnown RBP16.53■□□□□ 0.24
COL16A1-213ENST00000482910 LIG4P49917 911 aa16.53■□□□□ 0.24
COL16A1-213ENST00000482910 ALCAMQ13740 583 aa16.53■□□□□ 0.24
COL16A1-213ENST00000482910 ZBTB33Q86T24 672 aa16.53■□□□□ 0.24
COL16A1-213ENST00000482910 RBM23Q86U06 439 aaKnown RBP16.53■□□□□ 0.24
COL16A1-213ENST00000482910 LEO1Q8WVC0 666 aaPredicted RBP16.53■□□□□ 0.24
COL16A1-213ENST00000482910 MSLNLQ96KJ4 702 aa16.53■□□□□ 0.24
COL16A1-213ENST00000482910 SNX27Q96L92 541 aa16.53■□□□□ 0.24
COL16A1-213ENST00000482910 PPP1R10Q96QC0 940 aaKnown RBP16.53■□□□□ 0.24
COL16A1-213ENST00000482910 HERC2P3Q9BVR0 1158 aa16.53■□□□□ 0.24
COL16A1-213ENST00000482910 STRA6Q9BX79 667 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms