RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 CUL4BQ13620 913 aa22.88■■□□□ 1.25
SEC13-217ENST00000482647 ZNF280BQ86YH2 543 aa22.88■■□□□ 1.25
SEC13-217ENST00000482647 GSTCDQ8NEC7 633 aa22.88■■□□□ 1.25
SEC13-217ENST00000482647 MRPL38Q96DV4 380 aaKnown RBP22.88■■□□□ 1.25
SEC13-217ENST00000482647 CCDC34Q96HJ3 373 aa22.88■■□□□ 1.25
SEC13-217ENST00000482647 ACCSQ96QU6 501 aa22.88■■□□□ 1.25
SEC13-217ENST00000482647 RPS6KC1Q96S38 1066 aa22.88■■□□□ 1.25
SEC13-217ENST00000482647 ALDH2P05091 517 aa22.87■■□□□ 1.25
SEC13-217ENST00000482647 MYBP10242 640 aa22.87■■□□□ 1.25
SEC13-217ENST00000482647 CASP1P29466 404 aa22.87■■□□□ 1.25
SEC13-217ENST00000482647 PBX3P40426 434 aa22.87■■□□□ 1.25
SEC13-217ENST00000482647 OSTNP61366 133 aa22.87■■□□□ 1.25
SEC13-217ENST00000482647 PLCB3Q01970 1234 aa22.87■■□□□ 1.25
SEC13-217ENST00000482647 KRT17Q04695 432 aa22.87■■□□□ 1.25
SEC13-217ENST00000482647 UBE3AQ05086 875 aa22.87■■□□□ 1.25
SEC13-217ENST00000482647 L1TD1Q5T7N2 865 aaKnown RBP22.87■■□□□ 1.25
SEC13-217ENST00000482647 SLFN12LQ6IEE8 588 aa22.87■■□□□ 1.25
SEC13-217ENST00000482647 KRBA2Q6ZNG9 492 aa22.87■■□□□ 1.25
SEC13-217ENST00000482647 MAFAQ8NHW3 353 aaPredicted RBP22.87■■□□□ 1.25
SEC13-217ENST00000482647 SPPL3Q8TCT6 385 aa22.87■■□□□ 1.25
SEC13-217ENST00000482647 ACAP3Q96P50 834 aa22.87■■□□□ 1.25
SEC13-217ENST00000482647 TMEM175Q9BSA9 504 aa22.87■■□□□ 1.25
SEC13-217ENST00000482647 TOPORSQ9NS56 1045 aaPredicted RBP22.87■■□□□ 1.25
SEC13-217ENST00000482647 MIOSQ9NXC5 875 aa22.87■■□□□ 1.25
SEC13-217ENST00000482647 PUF60Q9UHX1 559 aaKnown RBP22.87■■□□□ 1.25
SEC13-217ENST00000482647 FNDC1Q4ZHG4 1894 aaPredicted RBP22.87■■□□□ 1.25
SEC13-217ENST00000482647 DDHD2O94830 711 aa22.86■■□□□ 1.25
SEC13-217ENST00000482647 GALTP07902 379 aa22.86■■□□□ 1.25
SEC13-217ENST00000482647 CASP5P51878 434 aa22.86■■□□□ 1.25
SEC13-217ENST00000482647 GRIK3Q13003 919 aa22.86■■□□□ 1.25
SEC13-217ENST00000482647 KYAT1Q16773 422 aa22.86■■□□□ 1.25
SEC13-217ENST00000482647 KANK3Q6NY19 840 aa22.86■■□□□ 1.25
SEC13-217ENST00000482647 CEP120Q8N960 986 aa22.86■■□□□ 1.25
SEC13-217ENST00000482647 TMEM206Q9H813 350 aa22.86■■□□□ 1.25
SEC13-217ENST00000482647 DNAJB4Q9UDY4 337 aa22.86■■□□□ 1.25
SEC13-217ENST00000482647 TCHHQ07283 1943 aa22.86■■□□□ 1.25
SEC13-217ENST00000482647 MYH11P35749 1972 aa22.85■■□□□ 1.25
SEC13-217ENST00000482647 NR1I2O75469 434 aa22.85■■□□□ 1.25
SEC13-217ENST00000482647 FAM26FQ5R3K3 315 aa22.85■■□□□ 1.25
SEC13-217ENST00000482647 SYCP3Q8IZU3 236 aa22.85■■□□□ 1.25
SEC13-217ENST00000482647 FMR1NBQ8N0W7 255 aaPredicted RBP22.85■■□□□ 1.25
SEC13-217ENST00000482647 SLC39A11Q8N1S5 342 aa22.85■■□□□ 1.25
SEC13-217ENST00000482647 MICALL1Q8N3F8 863 aa22.85■■□□□ 1.25
SEC13-217ENST00000482647 HPS3Q969F9 1004 aa22.85■■□□□ 1.25
SEC13-217ENST00000482647 MSTO1Q9BUK6 570 aa22.85■■□□□ 1.25
SEC13-217ENST00000482647 LZTS1Q9Y250 596 aa22.85■■□□□ 1.25
SEC13-217ENST00000482647 FAN1Q9Y2M0 1017 aa22.85■■□□□ 1.25
SEC13-217ENST00000482647 EYSQ5T1H1 3165 aa22.84■■□□□ 1.25
SEC13-217ENST00000482647 A0A0B4J269 797 aa22.84■■□□□ 1.25
SEC13-217ENST00000482647 NT5C1B-RDH14C9J2C7 533 aa22.84■■□□□ 1.25
SEC13-217ENST00000482647 THP07101 528 aa22.84■■□□□ 1.25
SEC13-217ENST00000482647 CLTAP09496 248 aa22.84■■□□□ 1.25
SEC13-217ENST00000482647 SLC11A1P49279 550 aa22.84■■□□□ 1.25
SEC13-217ENST00000482647 FAM160A1Q05DH4 1040 aa22.84■■□□□ 1.25
SEC13-217ENST00000482647 DSC1Q08554 894 aa22.84■■□□□ 1.25
SEC13-217ENST00000482647 KCNA1Q09470 495 aa22.84■■□□□ 1.25
SEC13-217ENST00000482647 COLGALT2Q8IYK4 626 aa22.84■■□□□ 1.25
SEC13-217ENST00000482647 POF1BQ8WVV4 589 aa22.84■■□□□ 1.25
SEC13-217ENST00000482647 TMEM169Q96HH4 297 aa22.84■■□□□ 1.25
SEC13-217ENST00000482647 FGFBP2Q9BYJ0 223 aa22.84■■□□□ 1.25
SEC13-217ENST00000482647 HAPLN2Q9GZV7 340 aa22.84■■□□□ 1.25
SEC13-217ENST00000482647 ANKRD63C9JTQ0 380 aa22.83■■□□□ 1.25
SEC13-217ENST00000482647 PTGESO14684 152 aa22.83■■□□□ 1.25
SEC13-217ENST00000482647 OGTO15294 1046 aa22.83■■□□□ 1.25
SEC13-217ENST00000482647 B4GALT3O60512 393 aa22.83■■□□□ 1.25
SEC13-217ENST00000482647 PRPF6O94906 941 aaKnown RBP22.83■■□□□ 1.25
SEC13-217ENST00000482647 DNAJB1P25685 340 aa22.83■■□□□ 1.25
SEC13-217ENST00000482647 EHHADHQ08426 723 aa22.83■■□□□ 1.25
SEC13-217ENST00000482647 POSTNQ15063 836 aa22.83■■□□□ 1.25
SEC13-217ENST00000482647 CCDC85BQ15834 202 aaPredicted RBP22.83■■□□□ 1.25
SEC13-217ENST00000482647 SLC39A4Q6P5W5 647 aa22.83■■□□□ 1.25
SEC13-217ENST00000482647 ALKAL1Q6UXT8 129 aa22.83■■□□□ 1.25
SEC13-217ENST00000482647 TMEM87AQ8NBN3 555 aa22.83■■□□□ 1.25
SEC13-217ENST00000482647 PPM1EQ8WY54 764 aa22.83■■□□□ 1.25
SEC13-217ENST00000482647 IGSF21Q96ID5 467 aa22.83■■□□□ 1.25
SEC13-217ENST00000482647 STYXL1Q9Y6J8 313 aa22.83■■□□□ 1.25
SEC13-217ENST00000482647 RALGAPA2Q2PPJ7 1873 aa22.83■■□□□ 1.24
SEC13-217ENST00000482647 NRP1O14786 923 aa22.82■■□□□ 1.24
SEC13-217ENST00000482647 EIF3DO15371 548 aaKnown RBP eCLIP22.82■■□□□ 1.24
SEC13-217ENST00000482647 OR1G1P47890 313 aa22.82■■□□□ 1.24
SEC13-217ENST00000482647 PSMD2Q13200 908 aa22.82■■□□□ 1.24
SEC13-217ENST00000482647 TUSC3Q13454 348 aa22.82■■□□□ 1.24
SEC13-217ENST00000482647 SNW1Q13573 536 aaKnown RBP22.82■■□□□ 1.24
SEC13-217ENST00000482647 CAMK1Q14012 370 aa22.82■■□□□ 1.24
SEC13-217ENST00000482647 SEZ6Q53EL9 994 aa22.82■■□□□ 1.24
SEC13-217ENST00000482647 TIGD5Q53EQ6 642 aa22.82■■□□□ 1.24
SEC13-217ENST00000482647 XKR4Q5GH76 650 aa22.82■■□□□ 1.24
SEC13-217ENST00000482647 EPM2AIP1Q7L775 607 aaPredicted RBP22.82■■□□□ 1.24
SEC13-217ENST00000482647 ENGASEQ8NFI3 743 aa22.82■■□□□ 1.24
SEC13-217ENST00000482647 ZNF507Q8TCN5 953 aa22.82■■□□□ 1.24
SEC13-217ENST00000482647 CCDC47Q96A33 483 aaKnown RBP22.82■■□□□ 1.24
SEC13-217ENST00000482647 CXCL16Q9H2A7 254 aa22.82■■□□□ 1.24
SEC13-217ENST00000482647 EXOC1Q9NV70 894 aa22.82■■□□□ 1.24
SEC13-217ENST00000482647 SMIM28A0A1B0GU29 152 aa22.81■■□□□ 1.24
SEC13-217ENST00000482647 KLRC4O43908 158 aa22.81■■□□□ 1.24
SEC13-217ENST00000482647 RPN1P04843 607 aaKnown RBP22.81■■□□□ 1.24
SEC13-217ENST00000482647 KMT5BQ4FZB7 885 aa22.81■■□□□ 1.24
SEC13-217ENST00000482647 PDE12Q6L8Q7 609 aaKnown RBP22.81■■□□□ 1.24
SEC13-217ENST00000482647 GLIS3Q8NEA6 775 aa22.81■■□□□ 1.24
SEC13-217ENST00000482647 MICAL1Q8TDZ2 1067 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms