RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 KIFC3Q9BVG8 833 aa14.83□□□□□ -0.04
CTDSP1-208ENST00000482272 PDZD7Q9H5P4 517 aa14.83□□□□□ -0.04
CTDSP1-208ENST00000482272 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.83□□□□□ -0.04
CTDSP1-208ENST00000482272 DDX19AQ9NUU7 478 aaKnown RBP14.83□□□□□ -0.04
CTDSP1-208ENST00000482272 SNTG2Q9NY99 539 aa14.83□□□□□ -0.04
CTDSP1-208ENST00000482272 LIMD1Q9UGP4 676 aa14.83□□□□□ -0.04
CTDSP1-208ENST00000482272 DNM3Q9UQ16 869 aa14.83□□□□□ -0.04
CTDSP1-208ENST00000482272 K7ERI5 159 aa14.82□□□□□ -0.04
CTDSP1-208ENST00000482272 THP07101 528 aa14.82□□□□□ -0.04
CTDSP1-208ENST00000482272 CDC25AP30304 524 aa14.82□□□□□ -0.04
CTDSP1-208ENST00000482272 PRPHP41219 470 aa14.82□□□□□ -0.04
CTDSP1-208ENST00000482272 CREMQ03060 361 aa14.82□□□□□ -0.04
CTDSP1-208ENST00000482272 HSP90AA2PQ14568 343 aaPredicted RBP14.82□□□□□ -0.04
CTDSP1-208ENST00000482272 RILPL1Q5EBL4 403 aa14.82□□□□□ -0.04
CTDSP1-208ENST00000482272 MCTP1Q6DN14 999 aa14.82□□□□□ -0.04
CTDSP1-208ENST00000482272 CYP26C1Q6V0L0 522 aa14.82□□□□□ -0.04
CTDSP1-208ENST00000482272 CCDC149Q6ZUS6 474 aa14.82□□□□□ -0.04
CTDSP1-208ENST00000482272 OTOP3Q7RTS5 596 aa14.82□□□□□ -0.04
CTDSP1-208ENST00000482272 KCNK18Q7Z418 384 aa14.82□□□□□ -0.04
CTDSP1-208ENST00000482272 APBB1IPQ7Z5R6 666 aaPredicted RBP14.82□□□□□ -0.04
CTDSP1-208ENST00000482272 HDAC7Q8WUI4 952 aa14.82□□□□□ -0.04
CTDSP1-208ENST00000482272 ASIC4Q96FT7 647 aa14.82□□□□□ -0.04
CTDSP1-208ENST00000482272 TMX3Q96JJ7 454 aa14.82□□□□□ -0.04
CTDSP1-208ENST00000482272 GPR62Q9BZJ7 368 aa14.82□□□□□ -0.04
CTDSP1-208ENST00000482272 CCDC113Q9H0I3 377 aa14.82□□□□□ -0.04
CTDSP1-208ENST00000482272 UPF2Q9HAU5 1272 aaKnown RBP14.82□□□□□ -0.04
CTDSP1-208ENST00000482272 MAN1C1Q9NR34 630 aa14.82□□□□□ -0.04
CTDSP1-208ENST00000482272 CCDC195A0A1B0GUA6 201 aa14.81□□□□□ -0.04
CTDSP1-208ENST00000482272 E9PMD0 336 aa14.81□□□□□ -0.04
CTDSP1-208ENST00000482272 DCAF4L1Q3SXM0 396 aa14.81□□□□□ -0.04
CTDSP1-208ENST00000482272 PALB2Q86YC2 1186 aa14.81□□□□□ -0.04
CTDSP1-208ENST00000482272 CMASQ8NFW8 434 aaPredicted RBP14.81□□□□□ -0.04
CTDSP1-208ENST00000482272 RIN2Q8WYP3 895 aaPredicted RBP14.81□□□□□ -0.04
CTDSP1-208ENST00000482272 RABGGTAQ92696 567 aa14.81□□□□□ -0.04
CTDSP1-208ENST00000482272 MMTAG2Q9BU76 263 aaKnown RBP14.81□□□□□ -0.04
CTDSP1-208ENST00000482272 PLEKHA4Q9H4M7 779 aa14.81□□□□□ -0.04
CTDSP1-208ENST00000482272 FNIP2Q9P278 1114 aa14.81□□□□□ -0.04
CTDSP1-208ENST00000482272 KCNG1Q9UIX4 513 aa14.81□□□□□ -0.04
CTDSP1-208ENST00000482272 TECTAO75443 2155 aa14.81□□□□□ -0.04
CTDSP1-208ENST00000482272 CCDC169A6NNP5 214 aa14.8□□□□□ -0.04
CTDSP1-208ENST00000482272 H3BQV1 296 aa14.8□□□□□ -0.04
CTDSP1-208ENST00000482272 NHLH1Q02575 133 aa14.8□□□□□ -0.04
CTDSP1-208ENST00000482272 ATF7IP2Q5U623 682 aa14.8□□□□□ -0.04
CTDSP1-208ENST00000482272 EEF1DP3Q658K8 133 aa14.8□□□□□ -0.04
CTDSP1-208ENST00000482272 ALYREFQ86V81 257 aaKnown RBP14.8□□□□□ -0.04
CTDSP1-208ENST00000482272 DAW1Q8N136 415 aa14.8□□□□□ -0.04
CTDSP1-208ENST00000482272 STAMQ92783 540 aa14.8□□□□□ -0.04
CTDSP1-208ENST00000482272 B3GALT6Q96L58 329 aa14.8□□□□□ -0.04
CTDSP1-208ENST00000482272 PAAF1Q9BRP4 392 aa14.8□□□□□ -0.04
CTDSP1-208ENST00000482272 RHOBTB2Q9BYZ6 727 aa14.8□□□□□ -0.04
CTDSP1-208ENST00000482272 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.8□□□□□ -0.04
CTDSP1-208ENST00000482272 GDAQ9Y2T3 454 aa14.8□□□□□ -0.04
CTDSP1-208ENST00000482272 SF3B1O75533 1304 aaKnown RBP eCLIP14.8□□□□□ -0.049e-7■■■■■ 57.4
CTDSP1-208ENST00000482272 KMT2EQ8IZD2 1858 aa14.8□□□□□ -0.04
CTDSP1-208ENST00000482272 WDFY4Q6ZS81 3184 aa14.79□□□□□ -0.04
CTDSP1-208ENST00000482272 CASTOR2A6NHX0 329 aa14.79□□□□□ -0.04
CTDSP1-208ENST00000482272 PTGESO14684 152 aa14.79□□□□□ -0.04
CTDSP1-208ENST00000482272 RECQL4O94761 1208 aa14.79□□□□□ -0.04
CTDSP1-208ENST00000482272 BRD1O95696 1058 aa14.79□□□□□ -0.04
CTDSP1-208ENST00000482272 ASGR2P07307 311 aa14.79□□□□□ -0.04
CTDSP1-208ENST00000482272 SPATA31D3P0C874 917 aa14.79□□□□□ -0.04
CTDSP1-208ENST00000482272 IGFBP6P24592 240 aaPredicted RBP14.79□□□□□ -0.04
CTDSP1-208ENST00000482272 AVPR2P30518 371 aa14.79□□□□□ -0.04
CTDSP1-208ENST00000482272 MCM2P49736 904 aa14.79□□□□□ -0.04
CTDSP1-208ENST00000482272 PEX3P56589 373 aa14.79□□□□□ -0.04
CTDSP1-208ENST00000482272 ELAVL2Q12926 359 aaKnown RBP14.79□□□□□ -0.04
CTDSP1-208ENST00000482272 IER5LQ5T953 404 aa14.79□□□□□ -0.04
CTDSP1-208ENST00000482272 NT5DC1Q5TFE4 455 aa14.79□□□□□ -0.04
CTDSP1-208ENST00000482272 SPATA31D4Q6ZUB0 917 aa14.79□□□□□ -0.04
CTDSP1-208ENST00000482272 PHLPP2Q6ZVD8 1323 aa14.79□□□□□ -0.04
CTDSP1-208ENST00000482272 GLYCTKQ8IVS8 523 aa14.79□□□□□ -0.04
CTDSP1-208ENST00000482272 KCTD17Q8N5Z5 321 aa14.79□□□□□ -0.04
CTDSP1-208ENST00000482272 DRC1Q96MC2 740 aa14.79□□□□□ -0.04
CTDSP1-208ENST00000482272 TMEM134Q9H6X4 195 aa14.79□□□□□ -0.04
CTDSP1-208ENST00000482272 C17orf75Q9HAS0 396 aa14.79□□□□□ -0.04
CTDSP1-208ENST00000482272 PIDD1Q9HB75 910 aa14.79□□□□□ -0.04
CTDSP1-208ENST00000482272 TNFSF13BQ9Y275 285 aa14.79□□□□□ -0.04
CTDSP1-208ENST00000482272 RBM19Q9Y4C8 960 aaKnown RBP14.79□□□□□ -0.04
CTDSP1-208ENST00000482272 TRIP11Q15643 1979 aa14.78□□□□□ -0.04
CTDSP1-208ENST00000482272 VWA8A3KMH1 1905 aa14.78□□□□□ -0.04
CTDSP1-208ENST00000482272 TGM5O43548 720 aa14.78□□□□□ -0.04
CTDSP1-208ENST00000482272 HIP1RO75146 1068 aa14.78□□□□□ -0.04
CTDSP1-208ENST00000482272 MYBP10242 640 aa14.78□□□□□ -0.04
CTDSP1-208ENST00000482272 GJB2P29033 226 aa14.78□□□□□ -0.04
CTDSP1-208ENST00000482272 NPTX2P47972 431 aa14.78□□□□□ -0.04
CTDSP1-208ENST00000482272 YARSP54577 528 aaKnown RBP14.78□□□□□ -0.04
CTDSP1-208ENST00000482272 PTPN5P54829 565 aa14.78□□□□□ -0.04
CTDSP1-208ENST00000482272 MAPK7Q13164 816 aa14.78□□□□□ -0.04
CTDSP1-208ENST00000482272 DMP1Q13316 513 aaPredicted RBP14.78□□□□□ -0.04
CTDSP1-208ENST00000482272 NAB2Q15742 525 aa14.78□□□□□ -0.04
CTDSP1-208ENST00000482272 FAM171A1Q5VUB5 890 aa14.78□□□□□ -0.04
CTDSP1-208ENST00000482272 RINT1Q6NUQ1 792 aa14.78□□□□□ -0.04
CTDSP1-208ENST00000482272 PDXDC1Q6P996 788 aa14.78□□□□□ -0.04
CTDSP1-208ENST00000482272 CEP57Q86XR8 500 aa14.78□□□□□ -0.04
CTDSP1-208ENST00000482272 LRRC15Q8TF66 581 aa14.78□□□□□ -0.04
CTDSP1-208ENST00000482272 HASPINQ8TF76 798 aa14.78□□□□□ -0.04
CTDSP1-208ENST00000482272 SMG7Q92540 1137 aaKnown RBP14.78□□□□□ -0.04
CTDSP1-208ENST00000482272 TBC1D32Q96NH3 1257 aa14.78□□□□□ -0.04
CTDSP1-208ENST00000482272 TTPALQ9BTX7 342 aa14.78□□□□□ -0.04
CTDSP1-208ENST00000482272 RUSC1Q9BVN2 902 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms