RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 PCIF1Q9H4Z3 704 aa12.63□□□□□ -0.39
HPS4-212ENST00000481910 IL23AQ9NPF7 189 aa12.63□□□□□ -0.39
HPS4-212ENST00000481910 A0A0B4J269 797 aa12.62□□□□□ -0.39
HPS4-212ENST00000481910 ABLIM1O14639 778 aa12.62□□□□□ -0.39
HPS4-212ENST00000481910 NPTXRO95502 500 aa12.62□□□□□ -0.39
HPS4-212ENST00000481910 NR3C1P04150 777 aa12.62□□□□□ -0.39
HPS4-212ENST00000481910 GARTP22102 1010 aa12.62□□□□□ -0.39
HPS4-212ENST00000481910 CYP2J2P51589 502 aa12.62□□□□□ -0.39
HPS4-212ENST00000481910 ZNF445P59923 1031 aa12.62□□□□□ -0.39
HPS4-212ENST00000481910 MCL1Q07820 350 aa12.62□□□□□ -0.39
HPS4-212ENST00000481910 IKBKEQ14164 716 aa12.62□□□□□ -0.39
HPS4-212ENST00000481910 DSC3Q14574 896 aa12.62□□□□□ -0.39
HPS4-212ENST00000481910 NOLC1Q14978 699 aaKnown RBP eCLIP12.62□□□□□ -0.39
HPS4-212ENST00000481910 EDRF1Q3B7T1 1238 aa12.62□□□□□ -0.39
HPS4-212ENST00000481910 ZCWPW2Q504Y3 356 aa12.62□□□□□ -0.39
HPS4-212ENST00000481910 RTN4RL1Q86UN2 441 aaPredicted RBP12.62□□□□□ -0.39
HPS4-212ENST00000481910 THNSL1Q8IYQ7 743 aa12.62□□□□□ -0.39
HPS4-212ENST00000481910 CCDC51Q96ER9 411 aa12.62□□□□□ -0.39
HPS4-212ENST00000481910 EEF2KMTQ96G04 330 aa12.62□□□□□ -0.39
HPS4-212ENST00000481910 HAPLN2Q9GZV7 340 aa12.62□□□□□ -0.39
HPS4-212ENST00000481910 CDT1Q9H211 546 aa12.62□□□□□ -0.39
HPS4-212ENST00000481910 AGO2Q9UKV8 859 aaKnown RBP12.62□□□□□ -0.39
HPS4-212ENST00000481910 MCF2P10911 925 aa12.62□□□□□ -0.39
HPS4-212ENST00000481910 NR2F2P24468 414 aa12.62□□□□□ -0.39
HPS4-212ENST00000481910 RPL13P26373 211 aaKnown RBP12.62□□□□□ -0.39
HPS4-212ENST00000481910 ZNF165P49910 485 aa12.62□□□□□ -0.39
HPS4-212ENST00000481910 FKBP3Q00688 224 aaKnown RBP12.62□□□□□ -0.39
HPS4-212ENST00000481910 ADAM9Q13443 819 aa12.62□□□□□ -0.39
HPS4-212ENST00000481910 TPD52L1Q16890 204 aaPredicted RBP12.62□□□□□ -0.39
HPS4-212ENST00000481910 TCTN1Q2MV58 587 aa12.62□□□□□ -0.39
HPS4-212ENST00000481910 DCAF4L1Q3SXM0 396 aa12.62□□□□□ -0.39
HPS4-212ENST00000481910 UBXN11Q5T124 520 aa12.62□□□□□ -0.39
HPS4-212ENST00000481910 TTI2Q6NXR4 508 aa12.62□□□□□ -0.39
HPS4-212ENST00000481910 SLC24A5Q71RS6 500 aa12.62□□□□□ -0.39
HPS4-212ENST00000481910 NOC3LQ8WTT2 800 aaKnown RBP12.62□□□□□ -0.39
HPS4-212ENST00000481910 MED15Q96RN5 788 aa12.62□□□□□ -0.39
HPS4-212ENST00000481910 TSPYL2Q9H2G4 693 aaPredicted RBP12.62□□□□□ -0.39
HPS4-212ENST00000481910 TSPY26PQ9H489 355 aa12.62□□□□□ -0.39
HPS4-212ENST00000481910 RGS18Q9NS28 235 aa12.62□□□□□ -0.39
HPS4-212ENST00000481910 FAM105AQ9NUU6 356 aa12.62□□□□□ -0.39
HPS4-212ENST00000481910 HSPBP1Q9NZL4 362 aa12.62□□□□□ -0.39
HPS4-212ENST00000481910 PCDHB2Q9Y5E7 798 aa12.62□□□□□ -0.39
HPS4-212ENST00000481910 LTBP2Q14767 1821 aa12.61□□□□□ -0.39
HPS4-212ENST00000481910 A0A0U1RQF3 1178 aa12.61□□□□□ -0.39
HPS4-212ENST00000481910 ENPP3O14638 875 aa12.61□□□□□ -0.39
HPS4-212ENST00000481910 KIAA0391O15091 583 aaKnown RBP12.61□□□□□ -0.39
HPS4-212ENST00000481910 EXOC3O60645 756 aa12.61□□□□□ -0.39
HPS4-212ENST00000481910 CAVIN2O95810 425 aa12.61□□□□□ -0.39
HPS4-212ENST00000481910 LDHAP00338 332 aaKnown RBP12.61□□□□□ -0.39
HPS4-212ENST00000481910 ACTN1P12814 892 aa12.61□□□□□ -0.39
HPS4-212ENST00000481910 IBSPP21815 317 aaPredicted RBP12.61□□□□□ -0.39
HPS4-212ENST00000481910 RGS19P49795 217 aa12.61□□□□□ -0.39
HPS4-212ENST00000481910 OSTNP61366 133 aa12.61□□□□□ -0.39
HPS4-212ENST00000481910 SEZ6Q53EL9 994 aa12.61□□□□□ -0.39
HPS4-212ENST00000481910 C16orf59Q7L2K0 433 aa12.61□□□□□ -0.39
HPS4-212ENST00000481910 C12orf56Q8IXR9 622 aa12.61□□□□□ -0.39
HPS4-212ENST00000481910 CSGALNACT2Q8N6G5 542 aa12.61□□□□□ -0.39
HPS4-212ENST00000481910 XXYLT1Q8NBI6 393 aa12.61□□□□□ -0.39
HPS4-212ENST00000481910 SAAL1Q96ER3 474 aa12.61□□□□□ -0.39
HPS4-212ENST00000481910 C1orf112Q9NSG2 853 aa12.61□□□□□ -0.39
HPS4-212ENST00000481910 HES2Q9Y543 173 aa12.61□□□□□ -0.39
HPS4-212ENST00000481910 ABHD14A-ACY1A0A1B0GW23 586 aa12.6□□□□□ -0.39
HPS4-212ENST00000481910 GOLGA8IPA6NC78 632 aa12.6□□□□□ -0.39
HPS4-212ENST00000481910 GOLGA8JA6NMD2 632 aa12.6□□□□□ -0.39
HPS4-212ENST00000481910 CETN3O15182 167 aa12.6□□□□□ -0.39
HPS4-212ENST00000481910 OGTO15294 1046 aa12.6□□□□□ -0.39
HPS4-212ENST00000481910 FGBP02675 491 aa12.6□□□□□ -0.39
HPS4-212ENST00000481910 ACOT2P49753 483 aa12.6□□□□□ -0.39
HPS4-212ENST00000481910 RAB27AP51159 221 aa12.6□□□□□ -0.39
HPS4-212ENST00000481910 NFIL3Q16649 462 aa12.6□□□□□ -0.39
HPS4-212ENST00000481910 CEP135Q66GS9 1140 aa12.6□□□□□ -0.39
HPS4-212ENST00000481910 FOXR2Q6PJQ5 311 aa12.6□□□□□ -0.39
HPS4-212ENST00000481910 ZNF365Q70YC5 407 aa12.6□□□□□ -0.39
HPS4-212ENST00000481910 OTOP2Q7RTS6 562 aa12.6□□□□□ -0.39
HPS4-212ENST00000481910 SLC9A9Q8IVB4 645 aa12.6□□□□□ -0.39
HPS4-212ENST00000481910 GPD1LQ8N335 351 aa12.6□□□□□ -0.39
HPS4-212ENST00000481910 RDH13Q8NBN7 331 aa12.6□□□□□ -0.39
HPS4-212ENST00000481910 ENOX1Q8TC92 643 aaKnown RBP12.6□□□□□ -0.39
HPS4-212ENST00000481910 DUSP9Q99956 384 aaKnown RBP12.6□□□□□ -0.39
HPS4-212ENST00000481910 FAM213AQ9BRX8 229 aa12.6□□□□□ -0.39
HPS4-212ENST00000481910 SRRTQ9BXP5 876 aaKnown RBP12.6□□□□□ -0.39
HPS4-212ENST00000481910 DMAC2Q9NW81 257 aa12.6□□□□□ -0.39
HPS4-212ENST00000481910 IPPQ9Y573 584 aa12.6□□□□□ -0.39
HPS4-212ENST00000481910 C9IYK1 514 aa12.6□□□□□ -0.39
HPS4-212ENST00000481910 SKIP12755 728 aa12.6□□□□□ -0.39
HPS4-212ENST00000481910 EPHB4P54760 987 aa12.6□□□□□ -0.39
HPS4-212ENST00000481910 SMG8Q8ND04 991 aaKnown RBP12.6□□□□□ -0.39
HPS4-212ENST00000481910 ZSWIM2Q8NEG5 633 aa12.6□□□□□ -0.39
HPS4-212ENST00000481910 TMEM174Q8WUU8 243 aa12.6□□□□□ -0.39
HPS4-212ENST00000481910 LINC01599Q8WXQ3 324 aa12.6□□□□□ -0.39
HPS4-212ENST00000481910 BPIFA3Q9BQP9 254 aa12.6□□□□□ -0.39
HPS4-212ENST00000481910 APOL6Q9BWW8 343 aa12.6□□□□□ -0.39
HPS4-212ENST00000481910 NXF3Q9H4D5 531 aaKnown RBP12.6□□□□□ -0.39
HPS4-212ENST00000481910 MED4Q9NPJ6 270 aa12.6□□□□□ -0.39
HPS4-212ENST00000481910 FRMD4BQ9Y2L6 1034 aa12.6□□□□□ -0.39
HPS4-212ENST00000481910 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.59□□□□□ -0.39
HPS4-212ENST00000481910 FSD2A1L4K1 749 aa12.59□□□□□ -0.39
HPS4-212ENST00000481910 EXTL3O43909 919 aa12.59□□□□□ -0.39
HPS4-212ENST00000481910 FAM189A1O60320 539 aa12.59□□□□□ -0.39
HPS4-212ENST00000481910 ZNF623O75123 536 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms